RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-222ENST00000582594 TMEM155Q4W5P6 130 aa7.52□□□□□ -1.21
PPP4R1-222ENST00000582594 C1orf185Q5T7R7 199 aa7.52□□□□□ -1.21
PPP4R1-222ENST00000582594 SAMD5Q5TGI4 173 aa7.52□□□□□ -1.21
PPP4R1-222ENST00000582594 DPF1Q92782 380 aa7.52□□□□□ -1.21
PPP4R1-222ENST00000582594 MSRB1Q9NZV6 116 aa7.52□□□□□ -1.21
PPP4R1-222ENST00000582594 CNOT1A5YKK6 2376 aaKnown RBP7.52□□□□□ -1.21
PPP4R1-222ENST00000582594 IGHV1-3A0A0C4DH29 117 aa7.52□□□□□ -1.21
PPP4R1-222ENST00000582594 EVI2AP22794 236 aa7.52□□□□□ -1.21
PPP4R1-222ENST00000582594 BSPH1Q075Z2 132 aa7.52□□□□□ -1.21
PPP4R1-222ENST00000582594 RNF125Q96EQ8 232 aa7.52□□□□□ -1.21
PPP4R1-222ENST00000582594 SH3BGRL2Q9UJC5 107 aa7.52□□□□□ -1.21
PPP4R1-222ENST00000582594 U3KQK5 164 aa7.52□□□□□ -1.21
PPP4R1-222ENST00000582594 TRBV6-1A0A0K0K1D8 114 aa7.51□□□□□ -1.21
PPP4R1-222ENST00000582594 TEX48A0A1B0GUV7 120 aa7.51□□□□□ -1.21
PPP4R1-222ENST00000582594 SMIM13P0DJ93 91 aa7.51□□□□□ -1.21
PPP4R1-222ENST00000582594 TMEM108Q6UXF1 575 aa7.51□□□□□ -1.21
PPP4R1-222ENST00000582594 ZNF491Q8N8L2 437 aa7.51□□□□□ -1.21
PPP4R1-222ENST00000582594 ADGRG4Q8IZF6 3080 aa7.51□□□□□ -1.21
PPP4R1-222ENST00000582594 NPIPB5A8MRT5 1133 aa7.51□□□□□ -1.21
PPP4R1-222ENST00000582594 K7EIM0 57 aa7.51□□□□□ -1.21
PPP4R1-222ENST00000582594 IGHV3-23P01764 117 aa7.51□□□□□ -1.21
PPP4R1-222ENST00000582594 EGR2P11161 476 aaPredicted RBP7.51□□□□□ -1.21
PPP4R1-222ENST00000582594 Q6AWC8 147 aa7.51□□□□□ -1.21
PPP4R1-222ENST00000582594 IGHV3OR16-8A0A075B7F1 116 aa7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 LYNX1G3V0Z9 82 aa7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 LYNX1P0DP58 116 aa7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 HLA-DMBP28068 263 aa7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 PPIFP30405 207 aaKnown RBP7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 ZNF80P51504 273 aaPredicted RBP7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 PAX8Q06710 450 aa7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 GTSCR1Q86UQ5 136 aa7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 AAMDCQ9H7C9 122 aa7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 WI2-2373I1.2A0A1W2PRP0 233 aa7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 SIVA1O15304 175 aa7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 PRSS1P07477 247 aa7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 GATA1P15976 413 aaPredicted RBP7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 LEPP41159 167 aa7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 C3orf36Q3SXR2 165 aa7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 PLA2G2CQ5R387 149 aa7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 NUP37Q8NFH4 326 aa7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 OR5A1Q8NGJ0 315 aa7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 ARHGAP32A7KAX9 2087 aa7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 EP300Q09472 2414 aaPredicted RBP7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 PPIAL4CA0A0B4J2A2 164 aa7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 SPAARA0A1B0GVQ0 90 aa7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 MRPS12O15235 138 aaKnown RBP7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 PPIAL4GP0DN37 164 aa7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 C8orf31Q8N9H6 132 aa7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 GTSF1LQ9H1H1 148 aa7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 NHP2Q9NX24 153 aaKnown RBP7.5□□□□□ -1.21
PPP4R1-222ENST00000582594 BUB1B-PAK6H3BSN5 160 aa7.49□□□□□ -1.21
PPP4R1-222ENST00000582594 K7EM74 188 aa7.49□□□□□ -1.21
PPP4R1-222ENST00000582594 TNFRSF13BO14836 293 aaPredicted RBP7.49□□□□□ -1.21
PPP4R1-222ENST00000582594 NBL1P41271 181 aa7.49□□□□□ -1.21
PPP4R1-222ENST00000582594 SAMD13Q5VXD3 122 aa7.49□□□□□ -1.21
PPP4R1-222ENST00000582594 RPEQ96AT9 228 aa7.49□□□□□ -1.21
PPP4R1-222ENST00000582594 CHAC1Q9BUX1 264 aa7.49□□□□□ -1.21
PPP4R1-222ENST00000582594 DYNLRB1Q9NP97 96 aa7.49□□□□□ -1.21
PPP4R1-222ENST00000582594 DMXL1Q9Y485 3027 aa7.49□□□□□ -1.21
PPP4R1-222ENST00000582594 ORM1P02763 201 aa7.49□□□□□ -1.21
PPP4R1-222ENST00000582594 CLEC2AQ6UVW9 174 aa7.49□□□□□ -1.21
PPP4R1-222ENST00000582594 FOXC2Q99958 501 aa7.49□□□□□ -1.21
PPP4R1-222ENST00000582594 VGLL1Q99990 258 aa7.49□□□□□ -1.21
PPP4R1-222ENST00000582594 IGHV3-35A0A0C4DH35 117 aa7.48□□□□□ -1.21
PPP4R1-222ENST00000582594 TMEM11P17152 192 aa7.48□□□□□ -1.21
PPP4R1-222ENST00000582594 MTURNQ8N3F0 131 aa7.48□□□□□ -1.21
PPP4R1-222ENST00000582594 ODF1Q14990 250 aa7.48□□□□□ -1.21
PPP4R1-222ENST00000582594 LYPD1Q8N2G4 141 aa7.48□□□□□ -1.21
PPP4R1-222ENST00000582594 DEFB124Q8NES8 71 aa7.48□□□□□ -1.21
PPP4R1-222ENST00000582594 MAP1LC3AQ9H492 121 aa7.48□□□□□ -1.21
PPP4R1-222ENST00000582594 IGLV1-47P01700 117 aa7.47□□□□□ -1.21
PPP4R1-222ENST00000582594 SMAGPQ0VAQ4 97 aa7.47□□□□□ -1.21
PPP4R1-222ENST00000582594 GFRALQ6UXV0 394 aa7.47□□□□□ -1.21
PPP4R1-222ENST00000582594 ZNF562Q6V9R5 426 aa7.47□□□□□ -1.21
PPP4R1-222ENST00000582594 RNF185Q96GF1 192 aa7.47□□□□□ -1.21
PPP4R1-222ENST00000582594 PRR25Q96S07 402 aa7.47□□□□□ -1.21
PPP4R1-222ENST00000582594 TMEM160Q9NX00 188 aa7.47□□□□□ -1.21
PPP4R1-222ENST00000582594 C16orf97H3BN30 126 aa7.47□□□□□ -1.21
PPP4R1-222ENST00000582594 THBDP07204 575 aa7.47□□□□□ -1.21
PPP4R1-222ENST00000582594 AZU1P20160 251 aa7.47□□□□□ -1.21
PPP4R1-222ENST00000582594 ASCL5Q7RTU5 278 aa7.47□□□□□ -1.21
PPP4R1-222ENST00000582594 TMEM158Q8WZ71 300 aa7.47□□□□□ -1.21
PPP4R1-222ENST00000582594 RNASE6Q93091 150 aaKnown RBP7.47□□□□□ -1.21
PPP4R1-222ENST00000582594 AGRNO00468 2067 aa7.47□□□□□ -1.21
PPP4R1-222ENST00000582594 CUL9Q8IWT3 2517 aa7.47□□□□□ -1.21
PPP4R1-222ENST00000582594 TRBV25-1A0A075B6N4 114 aa7.47□□□□□ -1.21
PPP4R1-222ENST00000582594 TIMM23O14925 209 aa7.47□□□□□ -1.21
PPP4R1-222ENST00000582594 IGKCP01834 107 aa7.47□□□□□ -1.21
PPP4R1-222ENST00000582594 ERCC8Q13216 396 aa7.47□□□□□ -1.21
PPP4R1-222ENST00000582594 WFDC2Q14508 124 aa7.47□□□□□ -1.21
PPP4R1-222ENST00000582594 ZC2HC1BQ5TFG8 222 aa7.47□□□□□ -1.21
PPP4R1-222ENST00000582594 HHLA3Q9XRX5 114 aa7.47□□□□□ -1.21
PPP4R1-222ENST00000582594 GVINP1Q7Z2Y8 2422 aa7.47□□□□□ -1.21
PPP4R1-222ENST00000582594 A0A0G2JNJ9 132 aa7.46□□□□□ -1.21
PPP4R1-222ENST00000582594 FCER1GP30273 86 aa7.46□□□□□ -1.21
PPP4R1-222ENST00000582594 Q9UFV3 132 aa7.46□□□□□ -1.21
PPP4R1-222ENST00000582594 TSSC4Q9Y5U2 329 aaPredicted RBP7.46□□□□□ -1.21
PPP4R1-222ENST00000582594 TMEM8BA6NDV4 472 aa7.46□□□□□ -1.22
PPP4R1-222ENST00000582594 TNFRSF6BO95407 300 aa7.46□□□□□ -1.22
PPP4R1-222ENST00000582594 AMTNQ6UX39 209 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms