RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 LAGE3Q14657 143 aa4.12□□□□□ -1.75
TVP23B-210ENST00000582288 SMCO1Q147U7 214 aa4.12□□□□□ -1.75
TVP23B-210ENST00000582288 SURF2Q15527 256 aaPredicted RBP4.12□□□□□ -1.75
TVP23B-210ENST00000582288 LCN15Q6UWW0 184 aa4.12□□□□□ -1.75
TVP23B-210ENST00000582288 OR13C8Q8NGS7 320 aa4.12□□□□□ -1.75
TVP23B-210ENST00000582288 LRRC20Q8TCA0 184 aa4.12□□□□□ -1.75
TVP23B-210ENST00000582288 TXNDC17Q9BRA2 123 aa4.12□□□□□ -1.75
TVP23B-210ENST00000582288 SLC50A1Q9BRV3 221 aa4.12□□□□□ -1.75
TVP23B-210ENST00000582288 TM2D2Q9BX73 214 aa4.12□□□□□ -1.75
TVP23B-210ENST00000582288 RBKSQ9H477 322 aa4.12□□□□□ -1.75
TVP23B-210ENST00000582288 NAA60Q9H7X0 242 aa4.12□□□□□ -1.75
TVP23B-210ENST00000582288 ZNF331Q9NQX6 463 aaPredicted RBP4.12□□□□□ -1.75
TVP23B-210ENST00000582288 TRAV12-3A0A0B4J271 114 aa4.11□□□□□ -1.75
TVP23B-210ENST00000582288 A0A0B4J2A0 478 aa4.11□□□□□ -1.75
TVP23B-210ENST00000582288 LOC100506127A0A0U1RQW1 187 aa4.11□□□□□ -1.75
TVP23B-210ENST00000582288 CRYM-AS1A6NIL9 109 aa4.11□□□□□ -1.75
TVP23B-210ENST00000582288 HYPMO75409 117 aa4.11□□□□□ -1.75
TVP23B-210ENST00000582288 IGLV2-11P01706 119 aa4.11□□□□□ -1.75
TVP23B-210ENST00000582288 SLC25A5P05141 298 aaKnown RBP4.11□□□□□ -1.75
TVP23B-210ENST00000582288 RPP30P78346 268 aaKnown RBP4.11□□□□□ -1.75
TVP23B-210ENST00000582288 EIF4E3Q8N5X7 224 aaKnown RBP4.11□□□□□ -1.75
TVP23B-210ENST00000582288 CIRBP-AS1Q8TBR5 109 aa4.11□□□□□ -1.75
TVP23B-210ENST00000582288 ZNF431Q8TF32 576 aaPredicted RBP4.11□□□□□ -1.75
TVP23B-210ENST00000582288 PCNPQ8WW12 178 aaKnown RBP4.11□□□□□ -1.75
TVP23B-210ENST00000582288 RTBDNQ9BSG5 229 aaPredicted RBP4.11□□□□□ -1.75
TVP23B-210ENST00000582288 GSN-AS1Q9NRJ2 163 aa4.11□□□□□ -1.75
TVP23B-210ENST00000582288 SHPKQ9UHJ6 478 aa4.11□□□□□ -1.75
TVP23B-210ENST00000582288 C14orf166Q9Y224 244 aaKnown RBP4.11□□□□□ -1.75
TVP23B-210ENST00000582288 HIGD1AQ9Y241 93 aa4.11□□□□□ -1.75
TVP23B-210ENST00000582288 PMS2P5A8MQ11 134 aa4.1□□□□□ -1.75
TVP23B-210ENST00000582288 KLLNB2CW77 178 aa4.1□□□□□ -1.75
TVP23B-210ENST00000582288 C9JCJ5 164 aa4.1□□□□□ -1.75
TVP23B-210ENST00000582288 PRSS46E5RG02 174 aa4.1□□□□□ -1.75
TVP23B-210ENST00000582288 MRPS12O15235 138 aaKnown RBP4.1□□□□□ -1.75
TVP23B-210ENST00000582288 CD3DP04234 171 aa4.1□□□□□ -1.75
TVP23B-210ENST00000582288 NMBP08949 121 aa4.1□□□□□ -1.75
TVP23B-210ENST00000582288 TNFSF8P32971 234 aa4.1□□□□□ -1.75
TVP23B-210ENST00000582288 SELENOTP62341 195 aa4.1□□□□□ -1.75
TVP23B-210ENST00000582288 PXDC1Q5TGL8 231 aa4.1□□□□□ -1.75
TVP23B-210ENST00000582288 TEPPQ6URK8 271 aa4.1□□□□□ -1.75
TVP23B-210ENST00000582288 TMEM182Q6ZP80 229 aaPredicted RBP4.1□□□□□ -1.75
TVP23B-210ENST00000582288 Q6ZRU5 148 aa4.1□□□□□ -1.75
TVP23B-210ENST00000582288 SNX29P2Q8IUI4 249 aa4.1□□□□□ -1.75
TVP23B-210ENST00000582288 TMEM229BQ8NBD8 167 aa4.1□□□□□ -1.75
TVP23B-210ENST00000582288 MARCH1Q8TCQ1 289 aa4.1□□□□□ -1.75
TVP23B-210ENST00000582288 TMEM37Q8WXS4 190 aa4.1□□□□□ -1.75
TVP23B-210ENST00000582288 C8orf49Q96NF6 230 aa4.1□□□□□ -1.75
TVP23B-210ENST00000582288 CIB3Q96Q77 187 aaPredicted RBP4.1□□□□□ -1.75
TVP23B-210ENST00000582288 MTFP1Q9UDX5 166 aa4.1□□□□□ -1.75
TVP23B-210ENST00000582288 KCNIP3Q9Y2W7 256 aa4.1□□□□□ -1.75
TVP23B-210ENST00000582288 PXMP4Q9Y6I8 212 aa4.1□□□□□ -1.75
TVP23B-210ENST00000582288 TRGV4A0A0C4DH28 118 aa4.09□□□□□ -1.75
TVP23B-210ENST00000582288 DUXBA0A1W2PPF3 345 aa4.09□□□□□ -1.75
TVP23B-210ENST00000582288 C7orf71A4D174 169 aa4.09□□□□□ -1.75
TVP23B-210ENST00000582288 K7EPK0 472 aa4.09□□□□□ -1.75
TVP23B-210ENST00000582288 PITX3O75364 302 aa4.09□□□□□ -1.75
TVP23B-210ENST00000582288 MED6O75586 246 aa4.09□□□□□ -1.75
TVP23B-210ENST00000582288 IL5P05113 134 aa4.09□□□□□ -1.75
TVP23B-210ENST00000582288 CT45A10P0DMU9 189 aa4.09□□□□□ -1.75
TVP23B-210ENST00000582288 GYPEP15421 78 aa4.09□□□□□ -1.75
TVP23B-210ENST00000582288 ANXA7P20073 488 aaKnown RBP4.09□□□□□ -1.75
TVP23B-210ENST00000582288 GATA2P23769 480 aaPredicted RBP4.09□□□□□ -1.75
TVP23B-210ENST00000582288 RPS19P39019 145 aaKnown RBP4.09□□□□□ -1.75
TVP23B-210ENST00000582288 TAS2R19P59542 299 aa4.09□□□□□ -1.75
TVP23B-210ENST00000582288 RPL37AP61513 92 aaKnown RBP4.09□□□□□ -1.75
TVP23B-210ENST00000582288 POLR2GP62487 172 aaKnown RBP eCLIP4.09□□□□□ -1.75
TVP23B-210ENST00000582288 SRPXP78539 464 aa4.09□□□□□ -1.75
TVP23B-210ENST00000582288 SSBP1Q04837 148 aaKnown RBP4.09□□□□□ -1.75
TVP23B-210ENST00000582288 OR10G4Q8NGN3 311 aa4.09□□□□□ -1.75
TVP23B-210ENST00000582288 C15orf40Q8WUR7 153 aa4.09□□□□□ -1.75
TVP23B-210ENST00000582288 NRG4Q8WWG1 115 aa4.09□□□□□ -1.75
TVP23B-210ENST00000582288 DAZAP1Q96EP5 407 aaKnown RBP4.09□□□□□ -1.75
TVP23B-210ENST00000582288 CNBD2Q96M20 576 aa4.09□□□□□ -1.75
TVP23B-210ENST00000582288 PAXXQ9BUH6 204 aa4.09□□□□□ -1.75
TVP23B-210ENST00000582288 PARD6GQ9BYG4 376 aaPredicted RBP4.09□□□□□ -1.75
TVP23B-210ENST00000582288 SLC25A31Q9H0C2 315 aa4.09□□□□□ -1.75
TVP23B-210ENST00000582288 VCX3BQ9H321 246 aa4.09□□□□□ -1.75
TVP23B-210ENST00000582288 GPR132Q9UNW8 380 aa4.09□□□□□ -1.75
TVP23B-210ENST00000582288 KLF12Q9Y4X4 402 aa4.09□□□□□ -1.75
TVP23B-210ENST00000582288 COX11Q9Y6N1 276 aa4.09□□□□□ -1.75
TVP23B-210ENST00000582288 TRAV8-3A0A0A6YYJ7 113 aa4.08□□□□□ -1.76
TVP23B-210ENST00000582288 TRAV8-6A0A0B4J262 113 aa4.08□□□□□ -1.76
TVP23B-210ENST00000582288 PRAC2D3DTV9 90 aa4.08□□□□□ -1.76
TVP23B-210ENST00000582288 E5RGE8 158 aa4.08□□□□□ -1.76
TVP23B-210ENST00000582288 MPDU1O75352 247 aa4.08□□□□□ -1.76
TVP23B-210ENST00000582288 RAB3DO95716 219 aa4.08□□□□□ -1.76
TVP23B-210ENST00000582288 IGHV3-53P01767 116 aa4.08□□□□□ -1.76
TVP23B-210ENST00000582288 LINC00869P0C866 280 aa4.08□□□□□ -1.76
TVP23B-210ENST00000582288 SLC25A6P12236 298 aa4.08□□□□□ -1.76
TVP23B-210ENST00000582288 CRISP2P16562 243 aa4.08□□□□□ -1.76
TVP23B-210ENST00000582288 ASIPP42127 132 aa4.08□□□□□ -1.76
TVP23B-210ENST00000582288 AKR1C1Q04828 323 aa4.08□□□□□ -1.76
TVP23B-210ENST00000582288 ZNF846Q147U1 533 aa4.08□□□□□ -1.76
TVP23B-210ENST00000582288 GUK1Q16774 197 aa4.08□□□□□ -1.76
TVP23B-210ENST00000582288 SCGB2B2Q4G0G5 96 aa4.08□□□□□ -1.76
TVP23B-210ENST00000582288 CYP2G1PQ6ZSU1 146 aa4.08□□□□□ -1.76
TVP23B-210ENST00000582288 BPIFA4PQ86YQ2 179 aa4.08□□□□□ -1.76
TVP23B-210ENST00000582288 Q8N976 141 aa4.08□□□□□ -1.76
TVP23B-210ENST00000582288 OR4D10Q8NGI6 311 aa4.08□□□□□ -1.76
TVP23B-210ENST00000582288 OR51S1Q8NGJ8 323 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms