RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 MRPL54Q6P161 138 aaKnown RBP17.51■□□□□ 0.39
CCDC47-204ENST00000582252 OR5R1Q8NH85 324 aa17.51■□□□□ 0.39
CCDC47-204ENST00000582252 FAM231BA6NCW3 169 aa17.5■□□□□ 0.39
CCDC47-204ENST00000582252 ZNF785A8K8V0 405 aa17.5■□□□□ 0.39
CCDC47-204ENST00000582252 TMEM136Q6ZRR5 245 aa17.5■□□□□ 0.39
CCDC47-204ENST00000582252 NUP35Q8NFH5 326 aa17.5■□□□□ 0.39
CCDC47-204ENST00000582252 NEU1Q99519 415 aa17.5■□□□□ 0.39
CCDC47-204ENST00000582252 HIST1H2BLQ99880 126 aa17.5■□□□□ 0.39
CCDC47-204ENST00000582252 M0R3E3 92 aa17.5■□□□□ 0.39
CCDC47-204ENST00000582252 ARL3P36405 182 aa17.5■□□□□ 0.39
CCDC47-204ENST00000582252 RAB4BP61018 213 aa17.5■□□□□ 0.39
CCDC47-204ENST00000582252 DEFB112Q30KQ8 113 aa17.5■□□□□ 0.39
CCDC47-204ENST00000582252 TMEM18Q96B42 140 aa17.5■□□□□ 0.39
CCDC47-204ENST00000582252 PACRGQ96M98 296 aaPredicted RBP17.5■□□□□ 0.39
CCDC47-204ENST00000582252 SLC50A1Q9BRV3 221 aa17.5■□□□□ 0.39
CCDC47-204ENST00000582252 SMAD5-AS1Q9Y6J3 95 aa17.5■□□□□ 0.39
CCDC47-204ENST00000582252 MXRA5Q9NR99 2828 aa17.49■□□□□ 0.39
CCDC47-204ENST00000582252 A0A0G2JLM5 398 aa17.49■□□□□ 0.39
CCDC47-204ENST00000582252 HIGD1CA8MV81 97 aa17.49■□□□□ 0.39
CCDC47-204ENST00000582252 NPIPB6E9PJ23 425 aa17.49■□□□□ 0.39
CCDC47-204ENST00000582252 CRISP2P16562 243 aa17.49■□□□□ 0.39
CCDC47-204ENST00000582252 SLC35B1P78383 322 aa17.49■□□□□ 0.39
CCDC47-204ENST00000582252 KRTAP1-1Q07627 177 aa17.49■□□□□ 0.39
CCDC47-204ENST00000582252 C9orf139Q6ZV77 190 aa17.49■□□□□ 0.39
CCDC47-204ENST00000582252 ZFHX3Q15911 3703 aa17.48■□□□□ 0.39
CCDC47-204ENST00000582252 IGHV3OR16-8A0A075B7F1 116 aa17.48■□□□□ 0.39
CCDC47-204ENST00000582252 CT45A10P0DMU9 189 aa17.48■□□□□ 0.39
CCDC47-204ENST00000582252 BLCAPP62952 87 aa17.48■□□□□ 0.39
CCDC47-204ENST00000582252 CLPSL1A2RUU4 121 aa17.47■□□□□ 0.39
CCDC47-204ENST00000582252 LINC00322Q6ZN03 302 aaPredicted RBP17.47■□□□□ 0.39
CCDC47-204ENST00000582252 NOL4LQ96MY1 436 aaPredicted RBP17.47■□□□□ 0.39
CCDC47-204ENST00000582252 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.47■□□□□ 0.39
CCDC47-204ENST00000582252 PF4V1P10720 104 aa17.47■□□□□ 0.39
CCDC47-204ENST00000582252 SAPCD1Q5SSQ6 148 aa17.47■□□□□ 0.39
CCDC47-204ENST00000582252 NIT2Q9NQR4 276 aa17.47■□□□□ 0.39
CCDC47-204ENST00000582252 NDUFA4O00483 81 aa17.46■□□□□ 0.39
CCDC47-204ENST00000582252 CHEK1O14757 476 aa17.46■□□□□ 0.39
CCDC47-204ENST00000582252 S100A12P80511 92 aa17.46■□□□□ 0.39
CCDC47-204ENST00000582252 FAM209BQ5JX69 171 aa17.46■□□□□ 0.39
CCDC47-204ENST00000582252 U3KQE9 123 aa17.46■□□□□ 0.39
CCDC47-204ENST00000582252 SETXQ7Z333 2677 aaKnown RBP17.46■□□□□ 0.39
CCDC47-204ENST00000582252 IGHV4-59P01825 116 aa17.45■□□□□ 0.38
CCDC47-204ENST00000582252 AMBPP02760 352 aa17.45■□□□□ 0.38
CCDC47-204ENST00000582252 ZC2HC1AQ96GY0 325 aa17.45■□□□□ 0.38
CCDC47-204ENST00000582252 IGLV1-40P01703 118 aa17.44■□□□□ 0.38
CCDC47-204ENST00000582252 APCSP02743 223 aa17.44■□□□□ 0.38
CCDC47-204ENST00000582252 Q0VG73 95 aa17.44■□□□□ 0.38
CCDC47-204ENST00000582252 RBPMS2Q6ZRY4 209 aaKnown RBP17.44■□□□□ 0.38
CCDC47-204ENST00000582252 OR2D3Q8NGH3 330 aa17.44■□□□□ 0.38
CCDC47-204ENST00000582252 ANK3Q12955 4377 aaKnown RBP17.44■□□□□ 0.38
CCDC47-204ENST00000582252 PCP4L1A6NKN8 68 aa17.44■□□□□ 0.38
CCDC47-204ENST00000582252 FRMD6-AS1P0C7T7 363 aa17.44■□□□□ 0.38
CCDC47-204ENST00000582252 DNLZQ5SXM8 178 aa17.44■□□□□ 0.38
CCDC47-204ENST00000582252 C16orf54Q6UWD8 224 aa17.44■□□□□ 0.38
CCDC47-204ENST00000582252 YAE1D1Q9NRH1 226 aa17.44■□□□□ 0.38
CCDC47-204ENST00000582252 CLEC5AQ9NY25 188 aa17.44■□□□□ 0.38
CCDC47-204ENST00000582252 HIVEP2P31629 2446 aa17.43■□□□□ 0.38
CCDC47-204ENST00000582252 MTORP42345 2549 aa17.43■□□□□ 0.38
CCDC47-204ENST00000582252 CFHR3Q02985 330 aa17.43■□□□□ 0.38
CCDC47-204ENST00000582252 PYY3Q5JQD4 70 aa17.43■□□□□ 0.38
CCDC47-204ENST00000582252 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.43■□□□□ 0.38
CCDC47-204ENST00000582252 TCF24Q7RTU0 167 aa17.43■□□□□ 0.38
CCDC47-204ENST00000582252 HBBP68871 147 aa17.42■□□□□ 0.38
CCDC47-204ENST00000582252 OR10J3Q5JRS4 329 aa17.42■□□□□ 0.38
CCDC47-204ENST00000582252 COX8CQ7Z4L0 72 aa17.42■□□□□ 0.38
CCDC47-204ENST00000582252 MRPL53Q96EL3 112 aaKnown RBP17.42■□□□□ 0.38
CCDC47-204ENST00000582252 NDFIP1Q9BT67 221 aa17.42■□□□□ 0.38
CCDC47-204ENST00000582252 TMEM89A2RUT3 159 aa17.41■□□□□ 0.38
CCDC47-204ENST00000582252 GRIFINA4D1Z8 144 aa17.41■□□□□ 0.38
CCDC47-204ENST00000582252 LCN12Q6JVE5 192 aa17.41■□□□□ 0.38
CCDC47-204ENST00000582252 BAGE3Q86Y29 109 aa17.41■□□□□ 0.38
CCDC47-204ENST00000582252 VPREB3Q9UKI3 123 aa17.41■□□□□ 0.38
CCDC47-204ENST00000582252 IGKV2-40A0A087WW87 121 aaPredicted RBP17.41■□□□□ 0.38
CCDC47-204ENST00000582252 A0A1B0GXF2 115 aa17.41■□□□□ 0.38
CCDC47-204ENST00000582252 RBAKDNA6NC62 111 aa17.41■□□□□ 0.38
CCDC47-204ENST00000582252 IGKV2D-40P01614 121 aaPredicted RBP17.41■□□□□ 0.38
CCDC47-204ENST00000582252 Q6AWC8 147 aa17.41■□□□□ 0.38
CCDC47-204ENST00000582252 OR4X2Q8NGF9 303 aa17.41■□□□□ 0.38
CCDC47-204ENST00000582252 IGHV3-66A0A0C4DH42 116 aa17.4■□□□□ 0.38
CCDC47-204ENST00000582252 A0A1W2PS18 150 aa17.4■□□□□ 0.38
CCDC47-204ENST00000582252 ZNF207O43670 478 aaKnown RBP17.4■□□□□ 0.38
CCDC47-204ENST00000582252 ESDP10768 282 aa17.4■□□□□ 0.38
CCDC47-204ENST00000582252 Q6ZS46 218 aa17.4■□□□□ 0.38
CCDC47-204ENST00000582252 GTSF1Q8WW33 167 aa17.4■□□□□ 0.38
CCDC47-204ENST00000582252 FOXA3P55318 350 aaPredicted RBP17.39■□□□□ 0.37
CCDC47-204ENST00000582252 Q6YL49 198 aa17.39■□□□□ 0.37
CCDC47-204ENST00000582252 PGLYRP4Q96LB8 373 aa17.39■□□□□ 0.37
CCDC47-204ENST00000582252 PRR25Q96S07 402 aa17.39■□□□□ 0.37
CCDC47-204ENST00000582252 TMEM160Q9NX00 188 aa17.39■□□□□ 0.37
CCDC47-204ENST00000582252 APOHP02749 345 aaPredicted RBP17.38■□□□□ 0.37
CCDC47-204ENST00000582252 PAFAH1B2P68402 229 aa17.38■□□□□ 0.37
CCDC47-204ENST00000582252 FAM162BQ5T6X4 162 aa17.38■□□□□ 0.37
CCDC47-204ENST00000582252 TMEM256Q8N2U0 113 aa17.38■□□□□ 0.37
CCDC47-204ENST00000582252 KLK15Q9H2R5 256 aa17.38■□□□□ 0.37
CCDC47-204ENST00000582252 PRDM13Q9H4Q3 707 aa17.38■□□□□ 0.37
CCDC47-204ENST00000582252 HIVEP1P15822 2718 aa17.38■□□□□ 0.37
CCDC47-204ENST00000582252 IGHV3-11P01762 117 aa17.38■□□□□ 0.37
CCDC47-204ENST00000582252 IGHG4P01861 327 aa17.38■□□□□ 0.37
CCDC47-204ENST00000582252 BMI1P35226 326 aa17.38■□□□□ 0.37
CCDC47-204ENST00000582252 CAMPP49913 170 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms