RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 H2AFB2P0C5Z0 115 aa10.2□□□□□ -0.78
SMARCE1-216ENST00000580419 MED14OSP0DP75 135 aa10.2□□□□□ -0.78
SMARCE1-216ENST00000580419 CAV2P51636 162 aa10.2□□□□□ -0.78
SMARCE1-216ENST00000580419 STX12Q86Y82 276 aa10.2□□□□□ -0.78
SMARCE1-216ENST00000580419 PRELID1Q9Y255 219 aa10.2□□□□□ -0.78
SMARCE1-216ENST00000580419 DYNC1H1Q14204 4646 aaKnown RBP10.19□□□□□ -0.78
SMARCE1-216ENST00000580419 TRAV12-2A0A075B6T6 113 aa10.19□□□□□ -0.78
SMARCE1-216ENST00000580419 C5orf51A6NDU8 294 aa10.19□□□□□ -0.78
SMARCE1-216ENST00000580419 PRSS29PA6NIE9 313 aa10.19□□□□□ -0.78
SMARCE1-216ENST00000580419 NPIPB6E9PJ23 425 aa10.19□□□□□ -0.78
SMARCE1-216ENST00000580419 H3BNG1 76 aa10.19□□□□□ -0.78
SMARCE1-216ENST00000580419 NMBP08949 121 aa10.19□□□□□ -0.78
SMARCE1-216ENST00000580419 AZU1P20160 251 aa10.19□□□□□ -0.78
SMARCE1-216ENST00000580419 MZT2BQ6NZ67 158 aa10.19□□□□□ -0.78
SMARCE1-216ENST00000580419 TMEM252Q8N6L7 170 aa10.19□□□□□ -0.78
SMARCE1-216ENST00000580419 S100ZQ8WXG8 99 aa10.19□□□□□ -0.78
SMARCE1-216ENST00000580419 TRAV6A0A075B6T7 132 aa10.18□□□□□ -0.78
SMARCE1-216ENST00000580419 FAM240BA0A1B0GVZ2 78 aa10.18□□□□□ -0.78
SMARCE1-216ENST00000580419 H3BQ15 152 aa10.18□□□□□ -0.78
SMARCE1-216ENST00000580419 CCSO14618 274 aa10.18□□□□□ -0.78
SMARCE1-216ENST00000580419 CST7O76096 145 aa10.18□□□□□ -0.78
SMARCE1-216ENST00000580419 BCAP31P51572 246 aa10.18□□□□□ -0.78
SMARCE1-216ENST00000580419 DAZ2Q13117 558 aaKnown RBP10.18□□□□□ -0.78
SMARCE1-216ENST00000580419 ASAH1Q13510 395 aa10.18□□□□□ -0.78
SMARCE1-216ENST00000580419 C18orf15Q96N68 181 aa10.18□□□□□ -0.78
SMARCE1-216ENST00000580419 PYGO2Q9BRQ0 406 aa10.18□□□□□ -0.78
SMARCE1-216ENST00000580419 LINC00467Q9BRT7 94 aa10.18□□□□□ -0.78
SMARCE1-216ENST00000580419 SLC39A9Q9NUM3 307 aa10.18□□□□□ -0.78
SMARCE1-216ENST00000580419 LSM5Q9Y4Y9 91 aaKnown RBP10.18□□□□□ -0.78
SMARCE1-216ENST00000580419 FAM25EA8MYX2 175 aa10.17□□□□□ -0.78
SMARCE1-216ENST00000580419 SLC17A3O00476 420 aa10.17□□□□□ -0.78
SMARCE1-216ENST00000580419 DEFB130BP0DP73 79 aa10.17□□□□□ -0.78
SMARCE1-216ENST00000580419 DEFB130AP0DP74 79 aa10.17□□□□□ -0.78
SMARCE1-216ENST00000580419 HTN3P15516 51 aa10.17□□□□□ -0.78
SMARCE1-216ENST00000580419 BTF3P20290 206 aaKnown RBP10.17□□□□□ -0.78
SMARCE1-216ENST00000580419 LEPP41159 167 aa10.17□□□□□ -0.78
SMARCE1-216ENST00000580419 MORN5Q5VZ52 161 aa10.17□□□□□ -0.78
SMARCE1-216ENST00000580419 CCDC28AQ8IWP9 274 aa10.17□□□□□ -0.78
SMARCE1-216ENST00000580419 SEC22CQ9BRL7 303 aa10.17□□□□□ -0.78
SMARCE1-216ENST00000580419 TRBV19A0A075B6N1 114 aa10.16□□□□□ -0.78
SMARCE1-216ENST00000580419 FAM24AA6NFZ4 105 aa10.16□□□□□ -0.78
SMARCE1-216ENST00000580419 SLC25A5P05141 298 aaKnown RBP10.16□□□□□ -0.78
SMARCE1-216ENST00000580419 HIST1H1EP10412 219 aaKnown RBP10.16□□□□□ -0.78
SMARCE1-216ENST00000580419 CCL18P55774 89 aa10.16□□□□□ -0.78
SMARCE1-216ENST00000580419 C1orf134Q5TEV5 83 aa10.16□□□□□ -0.78
SMARCE1-216ENST00000580419 GFI1BQ5VTD9 330 aa10.16□□□□□ -0.78
SMARCE1-216ENST00000580419 MIC13Q5XKP0 118 aa10.16□□□□□ -0.78
SMARCE1-216ENST00000580419 ZNRF2Q8NHG8 242 aa10.16□□□□□ -0.78
SMARCE1-216ENST00000580419 LINC00477Q96M19 166 aa10.16□□□□□ -0.78
SMARCE1-216ENST00000580419 KCNIP2Q9NS61 270 aa10.16□□□□□ -0.78
SMARCE1-216ENST00000580419 PCLOQ9Y6V0 5065 aa10.15□□□□□ -0.78
SMARCE1-216ENST00000580419 TRBV7-9A0A0J9YWB2 115 aa10.15□□□□□ -0.78
SMARCE1-216ENST00000580419 IGSF23A1L1A6 192 aa10.15□□□□□ -0.78
SMARCE1-216ENST00000580419 F5H768 121 aa10.15□□□□□ -0.78
SMARCE1-216ENST00000580419 PRAF2O60831 178 aa10.15□□□□□ -0.78
SMARCE1-216ENST00000580419 CYCSP99999 105 aaKnown RBP10.15□□□□□ -0.78
SMARCE1-216ENST00000580419 BAXQ07812 192 aa10.15□□□□□ -0.78
SMARCE1-216ENST00000580419 RAB32Q13637 225 aa10.15□□□□□ -0.78
SMARCE1-216ENST00000580419 ATG101Q9BSB4 218 aa10.15□□□□□ -0.78
SMARCE1-216ENST00000580419 NMES1Q9C002 83 aa10.15□□□□□ -0.78
SMARCE1-216ENST00000580419 GPN1Q9HCN4 374 aaPredicted RBP10.15□□□□□ -0.78
SMARCE1-216ENST00000580419 ZNF586Q9NXT0 402 aa10.15□□□□□ -0.78
SMARCE1-216ENST00000580419 KLLNB2CW77 178 aa10.14□□□□□ -0.79
SMARCE1-216ENST00000580419 PRAC2D3DTV9 90 aa10.14□□□□□ -0.79
SMARCE1-216ENST00000580419 E5RGE8 158 aa10.14□□□□□ -0.79
SMARCE1-216ENST00000580419 M0R2N4 97 aa10.14□□□□□ -0.79
SMARCE1-216ENST00000580419 RLN2P04090 185 aa10.14□□□□□ -0.79
SMARCE1-216ENST00000580419 PRM2P04554 102 aa10.14□□□□□ -0.79
SMARCE1-216ENST00000580419 CT45A10P0DMU9 189 aa10.14□□□□□ -0.79
SMARCE1-216ENST00000580419 ANXA2RQ3ZCQ2 193 aa10.14□□□□□ -0.79
SMARCE1-216ENST00000580419 C9orf47Q6ZRZ4 202 aa10.14□□□□□ -0.79
SMARCE1-216ENST00000580419 FAM19A4Q96LR4 140 aa10.14□□□□□ -0.79
SMARCE1-216ENST00000580419 NPCDR1Q9BY65 106 aa10.14□□□□□ -0.79
SMARCE1-216ENST00000580419 SLC25A31Q9H0C2 315 aa10.14□□□□□ -0.79
SMARCE1-216ENST00000580419 NOP10Q9NPE3 64 aaKnown RBP10.14□□□□□ -0.79
SMARCE1-216ENST00000580419 NBDYA0A0U1RRE5 68 aa10.13□□□□□ -0.79
SMARCE1-216ENST00000580419 UBE2L5PA0A1B0GUS4 154 aa10.13□□□□□ -0.79
SMARCE1-216ENST00000580419 CRISP2P16562 243 aa10.13□□□□□ -0.79
SMARCE1-216ENST00000580419 M6PRP20645 277 aa10.13□□□□□ -0.79
SMARCE1-216ENST00000580419 S100A10P60903 97 aa10.13□□□□□ -0.79
SMARCE1-216ENST00000580419 ZNF680Q8NEM1 530 aa10.13□□□□□ -0.79
SMARCE1-216ENST00000580419 RXFP4Q8TDU9 374 aa10.13□□□□□ -0.79
SMARCE1-216ENST00000580419 UPK3BQ9BT76 320 aa10.13□□□□□ -0.79
SMARCE1-216ENST00000580419 IGLV2-18A0A075B6J9 118 aa10.12□□□□□ -0.79
SMARCE1-216ENST00000580419 SNURFLB1AK76 121 aa10.12□□□□□ -0.79
SMARCE1-216ENST00000580419 NDUFB4O95168 129 aa10.12□□□□□ -0.79
SMARCE1-216ENST00000580419 FGF7P21781 194 aa10.12□□□□□ -0.79
SMARCE1-216ENST00000580419 AAMDCQ9H7C9 122 aa10.12□□□□□ -0.79
SMARCE1-216ENST00000580419 TRAV5A0A0B4J249 113 aa10.11□□□□□ -0.79
SMARCE1-216ENST00000580419 A0A1W2PPQ1 181 aa10.11□□□□□ -0.79
SMARCE1-216ENST00000580419 ZNF324O75467 553 aaPredicted RBP10.11□□□□□ -0.79
SMARCE1-216ENST00000580419 UPK1BO75841 260 aa10.11□□□□□ -0.79
SMARCE1-216ENST00000580419 KIR3DS1Q14943 382 aa10.11□□□□□ -0.79
SMARCE1-216ENST00000580419 FCN2Q15485 313 aa10.11□□□□□ -0.79
SMARCE1-216ENST00000580419 IBA57Q5T440 356 aaKnown RBP10.11□□□□□ -0.79
SMARCE1-216ENST00000580419 LYPD1Q8N2G4 141 aa10.11□□□□□ -0.79
SMARCE1-216ENST00000580419 RNF141Q8WVD5 230 aa10.11□□□□□ -0.79
SMARCE1-216ENST00000580419 MRPL32Q9BYC8 188 aaKnown RBP10.11□□□□□ -0.79
SMARCE1-216ENST00000580419 C7orf71A4D174 169 aa10.1□□□□□ -0.79
SMARCE1-216ENST00000580419 HTN1P15515 57 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms