RNA–Protein interactions for RNA: ENST00000579344.1

CCR7-203, Transcript of C-C motif chemokine receptor 7, humanhuman

TSL 1 (best) BASIC

Gene CCR7, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7-203ENST00000579344 LYRM7Q5U5X0 104 aa12.53□□□□□ -0.4
CCR7-203ENST00000579344 GTSCR1Q86UQ5 136 aa12.53□□□□□ -0.4
CCR7-203ENST00000579344 RASL11BQ9BPW5 248 aa12.53□□□□□ -0.4
CCR7-203ENST00000579344 TMEM133Q9H2Q1 129 aa12.53□□□□□ -0.4
CCR7-203ENST00000579344 IGLV2-18A0A075B6J9 118 aa12.53□□□□□ -0.4
CCR7-203ENST00000579344 A0A087WX48 190 aa12.53□□□□□ -0.4
CCR7-203ENST00000579344 TRAV12-1A0A0B4J245 112 aa12.53□□□□□ -0.4
CCR7-203ENST00000579344 LAMTOR5O43504 91 aa12.53□□□□□ -0.4
CCR7-203ENST00000579344 IGKV1-17P01599 117 aa12.53□□□□□ -0.4
CCR7-203ENST00000579344 HCP5Q6MZN7 132 aa12.53□□□□□ -0.4
CCR7-203ENST00000579344 MORN3Q6PF18 240 aaPredicted RBP12.53□□□□□ -0.4
CCR7-203ENST00000579344 SYT8Q8NBV8 401 aa12.53□□□□□ -0.4
CCR7-203ENST00000579344 PPDPFLQ8WWR9 84 aa12.53□□□□□ -0.4
CCR7-203ENST00000579344 C8orf49Q96NF6 230 aa12.53□□□□□ -0.4
CCR7-203ENST00000579344 FOXC2Q99958 501 aa12.53□□□□□ -0.4
CCR7-203ENST00000579344 DNAJC13O75165 2243 aa12.52□□□□□ -0.4
CCR7-203ENST00000579344 PCNX2A6NKB5 2137 aa12.52□□□□□ -0.4
CCR7-203ENST00000579344 DSCAMO60469 2012 aa12.52□□□□□ -0.41
CCR7-203ENST00000579344 NCBP2LA6PVI3 153 aaKnown RBP12.52□□□□□ -0.41
CCR7-203ENST00000579344 SPRY3O43610 288 aa12.52□□□□□ -0.41
CCR7-203ENST00000579344 TNFRSF6BO95407 300 aa12.52□□□□□ -0.41
CCR7-203ENST00000579344 FXYD7P58549 80 aa12.52□□□□□ -0.41
CCR7-203ENST00000579344 FAM201AQ5SY85 155 aa12.52□□□□□ -0.41
CCR7-203ENST00000579344 SBSPONQ8IVN8 264 aa12.52□□□□□ -0.41
CCR7-203ENST00000579344 MAPKAPK5-AS1Q8N8E1 139 aa12.52□□□□□ -0.41
CCR7-203ENST00000579344 CNEP1R1Q8N9A8 125 aa12.52□□□□□ -0.41
CCR7-203ENST00000579344 HIST1H4GQ99525 98 aa12.52□□□□□ -0.41
CCR7-203ENST00000579344 TTTY13Q9BZ97 58 aa12.52□□□□□ -0.41
CCR7-203ENST00000579344 AAMDCQ9H7C9 122 aa12.52□□□□□ -0.41
CCR7-203ENST00000579344 M0QXV9 152 aa12.51□□□□□ -0.41
CCR7-203ENST00000579344 TNFAIP6P98066 277 aaPredicted RBP12.51□□□□□ -0.41
CCR7-203ENST00000579344 CFAP161Q6P656 301 aa12.51□□□□□ -0.41
CCR7-203ENST00000579344 CFIP05156 583 aa12.51□□□□□ -0.41
CCR7-203ENST00000579344 AMTNQ6UX39 209 aa12.51□□□□□ -0.41
CCR7-203ENST00000579344 TPSG1Q9NRR2 321 aa12.51□□□□□ -0.41
CCR7-203ENST00000579344 TEX22C9J3V5 150 aa12.5□□□□□ -0.41
CCR7-203ENST00000579344 HOXA3O43365 443 aaPredicted RBP12.5□□□□□ -0.41
CCR7-203ENST00000579344 IGHV1-46P01743 117 aa12.5□□□□□ -0.41
CCR7-203ENST00000579344 SMCPP49901 116 aaPredicted RBP12.5□□□□□ -0.41
CCR7-203ENST00000579344 C9orf106Q8NAJ2 232 aa12.5□□□□□ -0.41
CCR7-203ENST00000579344 PRR25Q96S07 402 aa12.5□□□□□ -0.41
CCR7-203ENST00000579344 PGPEP1Q9NXJ5 209 aa12.5□□□□□ -0.41
CCR7-203ENST00000579344 COL6A3P12111 3177 aa12.49□□□□□ -0.41
CCR7-203ENST00000579344 MYMXA0A1B0GTQ4 84 aa12.49□□□□□ -0.41
CCR7-203ENST00000579344 SMKR1H3BMG3 65 aa12.49□□□□□ -0.41
CCR7-203ENST00000579344 ZNF474Q6S9Z5 364 aaPredicted RBP12.49□□□□□ -0.41
CCR7-203ENST00000579344 RPEQ96AT9 228 aa12.49□□□□□ -0.41
CCR7-203ENST00000579344 SPANXA1Q9NS26 97 aa12.49□□□□□ -0.41
CCR7-203ENST00000579344 SIGLEC9Q9Y336 463 aa12.49□□□□□ -0.41
CCR7-203ENST00000579344 TMEM262E9PQX1 116 aa12.48□□□□□ -0.41
CCR7-203ENST00000579344 IL4P05112 153 aa12.48□□□□□ -0.41
CCR7-203ENST00000579344 EGR2P11161 476 aaPredicted RBP12.48□□□□□ -0.41
CCR7-203ENST00000579344 UBE2D3P61077 147 aa12.48□□□□□ -0.41
CCR7-203ENST00000579344 UBE2D2P62837 147 aa12.48□□□□□ -0.41
CCR7-203ENST00000579344 GAGE5Q13069 117 aa12.48□□□□□ -0.41
CCR7-203ENST00000579344 GAGE6Q13070 117 aa12.48□□□□□ -0.41
CCR7-203ENST00000579344 PRR14LQ5THK1 2151 aa12.48□□□□□ -0.41
CCR7-203ENST00000579344 TMEM200BQ69YZ2 307 aa12.48□□□□□ -0.41
CCR7-203ENST00000579344 TEN1Q86WV5 123 aa12.48□□□□□ -0.41
CCR7-203ENST00000579344 MYOZ3Q8TDC0 251 aa12.48□□□□□ -0.41
CCR7-203ENST00000579344 C17orf77Q96MU5 243 aa12.48□□□□□ -0.41
CCR7-203ENST00000579344 MRPL35Q9NZE8 188 aaKnown RBP12.48□□□□□ -0.41
CCR7-203ENST00000579344 TRAV40A0A0B4J280 105 aa12.48□□□□□ -0.41
CCR7-203ENST00000579344 MT-ATP8P03928 68 aa12.48□□□□□ -0.41
CCR7-203ENST00000579344 UBE2D1P51668 147 aa12.48□□□□□ -0.41
CCR7-203ENST00000579344 XGP55808 180 aa12.48□□□□□ -0.41
CCR7-203ENST00000579344 ZNF491Q8N8L2 437 aa12.48□□□□□ -0.41
CCR7-203ENST00000579344 OR11H6Q8NGC7 330 aa12.48□□□□□ -0.41
CCR7-203ENST00000579344 PROCRQ9UNN8 238 aa12.48□□□□□ -0.41
CCR7-203ENST00000579344 ZNF672Q499Z4 452 aaPredicted RBP12.47□□□□□ -0.41
CCR7-203ENST00000579344 NFE4Q86UQ8 179 aa12.47□□□□□ -0.41
CCR7-203ENST00000579344 ZNF575Q86XF7 245 aa12.47□□□□□ -0.41
CCR7-203ENST00000579344 WFDC3Q8IUB2 231 aa12.47□□□□□ -0.41
CCR7-203ENST00000579344 RNF125Q96EQ8 232 aa12.47□□□□□ -0.41
CCR7-203ENST00000579344 RNF5Q99942 180 aa12.47□□□□□ -0.41
CCR7-203ENST00000579344 RAB1BQ9H0U4 201 aa12.47□□□□□ -0.41
CCR7-203ENST00000579344 TRBV20-1A0A075B6N2 111 aa12.46□□□□□ -0.41
CCR7-203ENST00000579344 DLX6P56179 175 aa12.46□□□□□ -0.41
CCR7-203ENST00000579344 IL17RELQ6ZVW7 336 aa12.46□□□□□ -0.41
CCR7-203ENST00000579344 DEFB108BQ8NET1 73 aa12.46□□□□□ -0.41
CCR7-203ENST00000579344 TMEM160Q9NX00 188 aa12.46□□□□□ -0.41
CCR7-203ENST00000579344 F8VRH5 84 aa12.46□□□□□ -0.42
CCR7-203ENST00000579344 H7C1H1 209 aa12.46□□□□□ -0.42
CCR7-203ENST00000579344 DIAPH2-AS1Q14236 149 aa12.46□□□□□ -0.42
CCR7-203ENST00000579344 LAGE3Q14657 143 aa12.46□□□□□ -0.42
CCR7-203ENST00000579344 RNF183Q96D59 192 aa12.46□□□□□ -0.42
CCR7-203ENST00000579344 RAI1Q7Z5J4 1906 aaPredicted RBP12.45□□□□□ -0.42
CCR7-203ENST00000579344 M0R3E3 92 aa12.45□□□□□ -0.42
CCR7-203ENST00000579344 TNFRSF13BO14836 293 aaPredicted RBP12.45□□□□□ -0.42
CCR7-203ENST00000579344 CCL3L1P16619 93 aa12.45□□□□□ -0.42
CCR7-203ENST00000579344 CACNA1GO43497 2377 aa12.45□□□□□ -0.42
CCR7-203ENST00000579344 TMSB15BA0A087X1C1 80 aa12.44□□□□□ -0.42
CCR7-203ENST00000579344 K7EMI3 77 aa12.44□□□□□ -0.42
CCR7-203ENST00000579344 SLC25A16P16260 332 aa12.44□□□□□ -0.42
CCR7-203ENST00000579344 SRD5A1P18405 259 aa12.44□□□□□ -0.42
CCR7-203ENST00000579344 FHL3Q13643 280 aa12.44□□□□□ -0.42
CCR7-203ENST00000579344 KNTC1P50748 2209 aa12.44□□□□□ -0.42
CCR7-203ENST00000579344 K7EIM0 57 aa12.44□□□□□ -0.42
CCR7-203ENST00000579344 RBP4P02753 201 aa12.44□□□□□ -0.42
CCR7-203ENST00000579344 ZFAND6Q6FIF0 208 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms