RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 ANKHD1Q8IWZ3 2542 aaKnown RBP4.21□□□□□ -1.74
NF1-219ENST00000579081 ZNF883P0CG24 379 aa4.21□□□□□ -1.74
NF1-219ENST00000579081 IGLV3-21P80748 117 aaPredicted RBP4.21□□□□□ -1.74
NF1-219ENST00000579081 HAMPP81172 84 aa4.21□□□□□ -1.74
NF1-219ENST00000579081 LGALS9BQ3B8N2 356 aa4.21□□□□□ -1.74
NF1-219ENST00000579081 LGALS9CQ6DKI2 356 aa4.21□□□□□ -1.74
NF1-219ENST00000579081 C20orf204Q6ZNR8 217 aa4.21□□□□□ -1.74
NF1-219ENST00000579081 CSTL1Q9H114 145 aa4.21□□□□□ -1.74
NF1-219ENST00000579081 ZNF138P52744 262 aa4.21□□□□□ -1.74
NF1-219ENST00000579081 UBE2BP63146 152 aa4.21□□□□□ -1.74
NF1-219ENST00000579081 C1QTNF5Q9BXJ0 243 aa4.21□□□□□ -1.74
NF1-219ENST00000579081 H3BUX3 64 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 UBR3Q6ZT12 1888 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 H2BFSP57053 126 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 C9orf153Q5TBE3 101 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 UBL5Q9BZL1 73 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 MBNL3Q9NUK0 354 aaKnown RBP4.2□□□□□ -1.74
NF1-219ENST00000579081 NOTCH3Q9UM47 2321 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 hADV29S1A0JD25 119 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 TCRAP04437 139 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 TIMP3P35625 211 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 FAM90A2PQ658T7 463 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 PLAC1Q9HBJ0 212 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 TEX48A0A1B0GUV7 120 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 RPL15P61313 204 aaKnown RBP4.2□□□□□ -1.74
NF1-219ENST00000579081 ZNF672Q499Z4 452 aaPredicted RBP4.2□□□□□ -1.74
NF1-219ENST00000579081 MDS2Q8NDY4 140 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 C20orf78Q9BR46 151 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 TPTE2P1Q5T6R2 138 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 MINOS1Q5TGZ0 78 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 ARFGEF3Q5TH69 2177 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 MINOS1-NBL1R4GNA1 71 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 PTPRFP10586 1907 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 A0A1B0GX51 115 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 C15orf32Q32M92 178 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 CLUHP3Q96NS8 147 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 IGKV1-8A0A0C4DH67 115 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 JMJD7-PLA2G4BH0Y9G9 81 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 GATA4P43694 442 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 SUPT4H1P63272 117 aaKnown RBP4.2□□□□□ -1.74
NF1-219ENST00000579081 ID3Q02535 119 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 CFHR1Q03591 330 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 LYZL1Q6UWQ5 148 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 TEN1Q86WV5 123 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 MRPL53Q96EL3 112 aaKnown RBP4.2□□□□□ -1.74
NF1-219ENST00000579081 ACACAQ13085 2346 aa4.2□□□□□ -1.74
NF1-219ENST00000579081 TRBV7-1A0A0A6YYK4 115 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 CSRP1P21291 193 aaKnown RBP4.19□□□□□ -1.74
NF1-219ENST00000579081 D6R8Y8 96 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 CELA3BP08861 270 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 PRB4P10163 310 aaPredicted RBP4.19□□□□□ -1.74
NF1-219ENST00000579081 IGHV2-26A0A0B4J1V2 119 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 A0A1W2PR77 199 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 UQCRQO14949 82 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 GNLYP22749 145 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 C16orf54Q6UWD8 224 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 ZCCHC24Q8N2G6 241 aaKnown RBP4.19□□□□□ -1.74
NF1-219ENST00000579081 USMG5Q96IX5 58 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 ZMAT4Q9H898 229 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 TRBV25-1A0A075B6N4 114 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 C9JQL5 133 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 DEFB131AP59861 70 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 LCN12Q6JVE5 192 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 LRRC75A-AS1Q8N1F1 130 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 NAA38Q9BRA0 125 aaKnown RBP4.19□□□□□ -1.74
NF1-219ENST00000579081 CHCHD2Q9Y6H1 151 aaPredicted RBP4.19□□□□□ -1.74
NF1-219ENST00000579081 SBF1O95248 1867 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 PFN2P35080 140 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 NDPQ00604 133 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 BRD3OSQ6XYD6 125 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 SCRT2Q9NQ03 307 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 MSRB2Q9Y3D2 182 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 SH2D1AO60880 128 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 PRR30Q53SZ7 412 aaPredicted RBP4.19□□□□□ -1.74
NF1-219ENST00000579081 BVES-AS1Q5T3Y7 98 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 LINC01590Q5TEZ4 76 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 SH2D6Q7Z4S9 175 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 OCC1Q8TAD7 63 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 MCRIP2Q9BUT9 160 aaKnown RBP4.19□□□□□ -1.74
NF1-219ENST00000579081 SCRT1Q9BWW7 348 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 TMEM14CQ9P0S9 112 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 PMS2P5A8MQ11 134 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 C9JAW5 83 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 CRLF1O75462 422 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 TRPT1Q86TN4 253 aaKnown RBP4.19□□□□□ -1.74
NF1-219ENST00000579081 C14orf178Q8N769 122 aaPredicted RBP4.19□□□□□ -1.74
NF1-219ENST00000579081 BMPERQ8N8U9 685 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 LINC01356Q8N9X3 169 aa4.19□□□□□ -1.74
NF1-219ENST00000579081 FAM110DQ8TAY7 271 aaPredicted RBP4.19□□□□□ -1.74
NF1-219ENST00000579081 FAM223BA6NKX1 122 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 IGHV1-46P01743 117 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 SMIM10L1P0DMW3 83 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 CFHR3Q02985 330 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 LHFPL1Q86WI0 220 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 FAM223AQ8IWN6 122 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 TMEM256Q8N2U0 113 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 SMIM10Q96HG1 83 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 MLST8Q9BVC4 326 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 IGHV1-18A0A0C4DH31 117 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 RBAKDNA6NC62 111 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms