RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 BMI1P35226 326 aa12.97□□□□□ -0.33
SREBF1-218ENST00000578469 RPEL1Q2QD12 228 aa12.97□□□□□ -0.33
SREBF1-218ENST00000578469 UNQ9165/PRO28630Q6UXU0 137 aa12.97□□□□□ -0.33
SREBF1-218ENST00000578469 Q6ZSV7 163 aa12.97□□□□□ -0.33
SREBF1-218ENST00000578469 GOLT1AQ6ZVE7 132 aa12.97□□□□□ -0.33
SREBF1-218ENST00000578469 KLHDC1Q8N7A1 406 aa12.97□□□□□ -0.33
SREBF1-218ENST00000578469 BTF3L4Q96K17 158 aa12.97□□□□□ -0.33
SREBF1-218ENST00000578469 OSTCQ9NRP0 149 aa12.97□□□□□ -0.33
SREBF1-218ENST00000578469 UFC1Q9Y3C8 167 aa12.97□□□□□ -0.33
SREBF1-218ENST00000578469 IGHV3OR16-13A0A075B7E8 117 aa12.96□□□□□ -0.33
SREBF1-218ENST00000578469 IGHV3-74A0A0B4J1X5 117 aa12.96□□□□□ -0.33
SREBF1-218ENST00000578469 FBLL1A6NHQ2 334 aaKnown RBP12.96□□□□□ -0.33
SREBF1-218ENST00000578469 DIRC3C9JPN6 131 aa12.96□□□□□ -0.33
SREBF1-218ENST00000578469 PFN1P07737 140 aaKnown RBP12.96□□□□□ -0.33
SREBF1-218ENST00000578469 RNASE1P07998 156 aaKnown RBP12.96□□□□□ -0.33
SREBF1-218ENST00000578469 OR5I1Q13606 314 aa12.96□□□□□ -0.33
SREBF1-218ENST00000578469 TMEM75Q8N9X5 138 aa12.96□□□□□ -0.33
SREBF1-218ENST00000578469 ESM1Q9NQ30 184 aa12.96□□□□□ -0.33
SREBF1-218ENST00000578469 ZNF331Q9NQX6 463 aaPredicted RBP12.96□□□□□ -0.33
SREBF1-218ENST00000578469 CLEC5AQ9NY25 188 aa12.96□□□□□ -0.33
SREBF1-218ENST00000578469 MLXQ9UH92 298 aa12.96□□□□□ -0.33
SREBF1-218ENST00000578469 TRBV24-1A0A075B6N3 115 aa12.95□□□□□ -0.34
SREBF1-218ENST00000578469 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.95□□□□□ -0.34
SREBF1-218ENST00000578469 GLMPQ8WWB7 406 aa12.95□□□□□ -0.34
SREBF1-218ENST00000578469 FAM210BQ96KR6 192 aa12.95□□□□□ -0.34
SREBF1-218ENST00000578469 DAZ1Q9NQZ3 744 aaKnown RBP12.95□□□□□ -0.34
SREBF1-218ENST00000578469 TGIF2-C20orf24A0A0A6YYL0 155 aa12.94□□□□□ -0.34
SREBF1-218ENST00000578469 IGHV7-4-1A0A0J9YVY3 117 aa12.94□□□□□ -0.34
SREBF1-218ENST00000578469 C1orf196B1AJZ1 125 aa12.94□□□□□ -0.34
SREBF1-218ENST00000578469 LTAP01374 205 aa12.94□□□□□ -0.34
SREBF1-218ENST00000578469 CXCL1P09341 107 aa12.94□□□□□ -0.34
SREBF1-218ENST00000578469 FLI1Q01543 452 aaPredicted RBP12.94□□□□□ -0.34
SREBF1-218ENST00000578469 PRR31Q5SQ13 230 aa12.94□□□□□ -0.34
SREBF1-218ENST00000578469 IBA57Q5T440 356 aaKnown RBP12.94□□□□□ -0.34
SREBF1-218ENST00000578469 PRNTQ86SH4 94 aa12.94□□□□□ -0.34
SREBF1-218ENST00000578469 Q86TA4 180 aa12.94□□□□□ -0.34
SREBF1-218ENST00000578469 NHLRC2Q8NBF2 726 aa12.94□□□□□ -0.34
SREBF1-218ENST00000578469 SGK494Q96LW2 274 aa12.94□□□□□ -0.34
SREBF1-218ENST00000578469 ZFP30Q9Y2G7 519 aa12.94□□□□□ -0.34
SREBF1-218ENST00000578469 PKD1L1Q8TDX9 2849 aa12.94□□□□□ -0.34
SREBF1-218ENST00000578469 M0R3E3 92 aa12.93□□□□□ -0.34
SREBF1-218ENST00000578469 RPS10P46783 165 aaKnown RBP12.93□□□□□ -0.34
SREBF1-218ENST00000578469 RAB5BP61020 215 aa12.93□□□□□ -0.34
SREBF1-218ENST00000578469 FOXL1Q12952 345 aa12.93□□□□□ -0.34
SREBF1-218ENST00000578469 PSG3Q16557 428 aa12.93□□□□□ -0.34
SREBF1-218ENST00000578469 FAM231DQ6ZW35 169 aa12.93□□□□□ -0.34
SREBF1-218ENST00000578469 PYGO2Q9BRQ0 406 aa12.93□□□□□ -0.34
SREBF1-218ENST00000578469 IL36BQ9NZH7 164 aa12.93□□□□□ -0.34
SREBF1-218ENST00000578469 SMPXQ9UHP9 88 aa12.93□□□□□ -0.34
SREBF1-218ENST00000578469 PSG8Q9UQ74 426 aa12.93□□□□□ -0.34
SREBF1-218ENST00000578469 TGP01266 2768 aa12.92□□□□□ -0.34
SREBF1-218ENST00000578469 CDX1P47902 265 aaPredicted RBP12.92□□□□□ -0.34
SREBF1-218ENST00000578469 TM4SF20Q53R12 229 aa12.92□□□□□ -0.34
SREBF1-218ENST00000578469 SHISA2Q6UWI4 295 aa12.92□□□□□ -0.34
SREBF1-218ENST00000578469 REC114Q7Z4M0 266 aa12.92□□□□□ -0.34
SREBF1-218ENST00000578469 TMEM183AQ8IXX5 376 aa12.92□□□□□ -0.34
SREBF1-218ENST00000578469 MRPL53Q96EL3 112 aaKnown RBP12.92□□□□□ -0.34
SREBF1-218ENST00000578469 MLST8Q9BVC4 326 aa12.92□□□□□ -0.34
SREBF1-218ENST00000578469 RHPN1-AS1Q9BWJ2 59 aa12.92□□□□□ -0.34
SREBF1-218ENST00000578469 TRAV9-1A0A075B6T8 112 aa12.91□□□□□ -0.34
SREBF1-218ENST00000578469 A0A1W2PPQ1 181 aa12.91□□□□□ -0.34
SREBF1-218ENST00000578469 LGALS9O00182 355 aa12.91□□□□□ -0.34
SREBF1-218ENST00000578469 CHEK1O14757 476 aa12.91□□□□□ -0.34
SREBF1-218ENST00000578469 GATCO43716 136 aaKnown RBP12.91□□□□□ -0.34
SREBF1-218ENST00000578469 RPL19P84098 196 aaKnown RBP12.91□□□□□ -0.34
SREBF1-218ENST00000578469 LCN12Q6JVE5 192 aa12.91□□□□□ -0.34
SREBF1-218ENST00000578469 C8orf86Q6ZUL3 223 aa12.91□□□□□ -0.34
SREBF1-218ENST00000578469 WFDC12Q8WWY7 111 aa12.91□□□□□ -0.34
SREBF1-218ENST00000578469 C16orf92Q96LL3 132 aa12.91□□□□□ -0.34
SREBF1-218ENST00000578469 RNASE7Q9H1E1 156 aaKnown RBP12.91□□□□□ -0.34
SREBF1-218ENST00000578469 C16orf95Q9H693 158 aa12.91□□□□□ -0.34
SREBF1-218ENST00000578469 ZNF492Q9P255 531 aa12.91□□□□□ -0.34
SREBF1-218ENST00000578469 V9GYV3 84 aa12.91□□□□□ -0.34
SREBF1-218ENST00000578469 IGHV4OR15-8A0A075B7B6 117 aa12.9□□□□□ -0.34
SREBF1-218ENST00000578469 A0A087WW49 117 aa12.9□□□□□ -0.34
SREBF1-218ENST00000578469 TRAV8-1A0A0A6YYK1 113 aa12.9□□□□□ -0.34
SREBF1-218ENST00000578469 ZNF705GA8MUZ8 300 aaPredicted RBP12.9□□□□□ -0.34
SREBF1-218ENST00000578469 IGLV2-11P01706 119 aa12.9□□□□□ -0.34
SREBF1-218ENST00000578469 KHDC1LQ5JSQ8 128 aa12.9□□□□□ -0.34
SREBF1-218ENST00000578469 PRR27Q6MZM9 219 aa12.9□□□□□ -0.34
SREBF1-218ENST00000578469 C1QL4Q86Z23 238 aa12.9□□□□□ -0.34
SREBF1-218ENST00000578469 DPF1Q92782 380 aa12.9□□□□□ -0.34
SREBF1-218ENST00000578469 DAZAP1Q96EP5 407 aaKnown RBP12.9□□□□□ -0.34
SREBF1-218ENST00000578469 ZNF747Q9BV97 191 aa12.9□□□□□ -0.34
SREBF1-218ENST00000578469 FAM3BP58499 235 aaPredicted RBP12.89□□□□□ -0.35
SREBF1-218ENST00000578469 RPL11P62913 178 aaKnown RBP12.89□□□□□ -0.35
SREBF1-218ENST00000578469 SAPCD1Q5SSQ6 148 aa12.89□□□□□ -0.35
SREBF1-218ENST00000578469 SAMD13Q5VXD3 122 aa12.89□□□□□ -0.35
SREBF1-218ENST00000578469 IGFL4Q6B9Z1 124 aa12.89□□□□□ -0.35
SREBF1-218ENST00000578469 NUDT10Q8NFP7 164 aa12.89□□□□□ -0.35
SREBF1-218ENST00000578469 C4orf3Q8WVX3 66 aa12.89□□□□□ -0.35
SREBF1-218ENST00000578469 NUDT11Q96G61 164 aa12.89□□□□□ -0.35
SREBF1-218ENST00000578469 SRD5A3Q9H8P0 318 aa12.89□□□□□ -0.35
SREBF1-218ENST00000578469 IGKV2-40A0A087WW87 121 aaPredicted RBP12.88□□□□□ -0.35
SREBF1-218ENST00000578469 RBAKDNA6NC62 111 aa12.88□□□□□ -0.35
SREBF1-218ENST00000578469 A8MWP6 167 aa12.88□□□□□ -0.35
SREBF1-218ENST00000578469 IGKV2D-40P01614 121 aaPredicted RBP12.88□□□□□ -0.35
SREBF1-218ENST00000578469 HLA-DMBP28068 263 aa12.88□□□□□ -0.35
SREBF1-218ENST00000578469 HOXD3P31249 432 aaPredicted RBP12.88□□□□□ -0.35
SREBF1-218ENST00000578469 GBGT1Q8N5D6 347 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms