RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 ZNF586Q9NXT0 402 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 CLEC5AQ9NY25 188 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 PKD1L1Q8TDX9 2849 aa6.02□□□□□ -1.45
COPS3-215ENST00000578317 A0A1W2PRE2 83 aa6.02□□□□□ -1.45
COPS3-215ENST00000578317 PGPEP1LA6NFU8 196 aa6.02□□□□□ -1.45
COPS3-215ENST00000578317 TSPAN4O14817 238 aa6.02□□□□□ -1.45
COPS3-215ENST00000578317 NDUFS6O75380 124 aaKnown RBP6.02□□□□□ -1.45
COPS3-215ENST00000578317 EIF3GO75821 320 aaKnown RBP eCLIP6.02□□□□□ -1.45
COPS3-215ENST00000578317 IGLV1-51P01701 117 aa6.02□□□□□ -1.45
COPS3-215ENST00000578317 PYYP10082 97 aa6.02□□□□□ -1.45
COPS3-215ENST00000578317 FGF8P55075 233 aaPredicted RBP6.02□□□□□ -1.45
COPS3-215ENST00000578317 UBE2L3P68036 154 aaKnown RBP6.02□□□□□ -1.45
COPS3-215ENST00000578317 ARL6IP6Q8N6S5 226 aa6.02□□□□□ -1.45
COPS3-215ENST00000578317 TXNDC17Q9BRA2 123 aa6.02□□□□□ -1.45
COPS3-215ENST00000578317 TMPRSS5Q9H3S3 457 aa6.02□□□□□ -1.45
COPS3-215ENST00000578317 NRN1Q9NPD7 142 aa6.02□□□□□ -1.45
COPS3-215ENST00000578317 NDUFB4O95168 129 aa6.01□□□□□ -1.45
COPS3-215ENST00000578317 PAFAH1B2P68402 229 aa6.01□□□□□ -1.45
COPS3-215ENST00000578317 C9orf66Q5T8R8 295 aa6.01□□□□□ -1.45
COPS3-215ENST00000578317 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.01□□□□□ -1.45
COPS3-215ENST00000578317 DYNLRB2Q8TF09 96 aa6.01□□□□□ -1.45
COPS3-215ENST00000578317 DCANP1Q8TF63 244 aa6.01□□□□□ -1.45
COPS3-215ENST00000578317 SMDT1Q9H4I9 107 aa6.01□□□□□ -1.45
COPS3-215ENST00000578317 MANBALQ9NQG1 85 aa6.01□□□□□ -1.45
COPS3-215ENST00000578317 LINC00862A6NCI5 91 aa6□□□□□ -1.45
COPS3-215ENST00000578317 FAM74A7A6NL05 159 aa6□□□□□ -1.45
COPS3-215ENST00000578317 ISLRO14498 428 aa6□□□□□ -1.45
COPS3-215ENST00000578317 SOCS3O14543 225 aa6□□□□□ -1.45
COPS3-215ENST00000578317 SAP30O75446 220 aa6□□□□□ -1.45
COPS3-215ENST00000578317 OR10J4P0C629 311 aa6□□□□□ -1.45
COPS3-215ENST00000578317 FAM3BP58499 235 aaPredicted RBP6□□□□□ -1.45
COPS3-215ENST00000578317 PSG9Q00887 426 aa6□□□□□ -1.45
COPS3-215ENST00000578317 BEAN1Q3B7T3 259 aa6□□□□□ -1.45
COPS3-215ENST00000578317 RBPMS2Q6ZRY4 209 aaKnown RBP6□□□□□ -1.45
COPS3-215ENST00000578317 SPAG8Q99932 426 aaPredicted RBP6□□□□□ -1.45
COPS3-215ENST00000578317 TCEAL7Q9BRU2 100 aa6□□□□□ -1.45
COPS3-215ENST00000578317 SLC50A1Q9BRV3 221 aa6□□□□□ -1.45
COPS3-215ENST00000578317 KRTAP9-2Q9BYQ4 174 aa6□□□□□ -1.45
COPS3-215ENST00000578317 GPR61Q9BZJ8 451 aa6□□□□□ -1.45
COPS3-215ENST00000578317 MS4A6AQ9H2W1 248 aa6□□□□□ -1.45
COPS3-215ENST00000578317 ZNF331Q9NQX6 463 aaPredicted RBP6□□□□□ -1.45
COPS3-215ENST00000578317 NOTCH3Q9UM47 2321 aa6□□□□□ -1.45
COPS3-215ENST00000578317 RAB19A4D1S5 217 aa5.99□□□□□ -1.45
COPS3-215ENST00000578317 K7EQG2 157 aa5.99□□□□□ -1.45
COPS3-215ENST00000578317 IFNA1P01562 189 aa5.99□□□□□ -1.45
COPS3-215ENST00000578317 RANP62826 216 aaKnown RBP5.99□□□□□ -1.45
COPS3-215ENST00000578317 TMEM61Q8N0U2 210 aa5.99□□□□□ -1.45
COPS3-215ENST00000578317 EIF4E3Q8N5X7 224 aaKnown RBP5.99□□□□□ -1.45
COPS3-215ENST00000578317 BLNKQ8WV28 456 aa5.99□□□□□ -1.45
COPS3-215ENST00000578317 PCNPQ8WW12 178 aaKnown RBP5.99□□□□□ -1.45
COPS3-215ENST00000578317 MRPL53Q96EL3 112 aaKnown RBP5.99□□□□□ -1.45
COPS3-215ENST00000578317 FAM210AQ96ND0 272 aa5.99□□□□□ -1.45
COPS3-215ENST00000578317 GNG13Q9P2W3 67 aa5.99□□□□□ -1.45
COPS3-215ENST00000578317 VAX2Q9UIW0 290 aa5.99□□□□□ -1.45
COPS3-215ENST00000578317 PRELID1Q9Y255 219 aa5.99□□□□□ -1.45
COPS3-215ENST00000578317 TRAV8-2A0A0B4J237 113 aa5.99□□□□□ -1.45
COPS3-215ENST00000578317 A0A1B0GV50 99 aa5.99□□□□□ -1.45
COPS3-215ENST00000578317 RBFOX3A6NFN3 312 aa5.99□□□□□ -1.45
COPS3-215ENST00000578317 PAGE4O60829 102 aa5.99□□□□□ -1.45
COPS3-215ENST00000578317 BCL2P10415 239 aa5.99□□□□□ -1.45
COPS3-215ENST00000578317 ID1P41134 155 aa5.99□□□□□ -1.45
COPS3-215ENST00000578317 PCP4P48539 62 aa5.99□□□□□ -1.45
COPS3-215ENST00000578317 KRTAP19-4Q3LI73 84 aa5.99□□□□□ -1.45
COPS3-215ENST00000578317 ZNF506Q5JVG8 444 aa5.99□□□□□ -1.45
COPS3-215ENST00000578317 LCN12Q6JVE5 192 aa5.99□□□□□ -1.45
COPS3-215ENST00000578317 IQCF2Q8IXL9 164 aa5.99□□□□□ -1.45
COPS3-215ENST00000578317 FAM110AQ9BQ89 295 aa5.99□□□□□ -1.45
COPS3-215ENST00000578317 AAMDCQ9H7C9 122 aa5.99□□□□□ -1.45
COPS3-215ENST00000578317 OTORQ9NRC9 128 aa5.99□□□□□ -1.45
COPS3-215ENST00000578317 ZNF256Q9Y2P7 627 aaPredicted RBP5.99□□□□□ -1.45
COPS3-215ENST00000578317 YTHDF2Q9Y5A9 579 aaKnown RBP5.99□□□□□ -1.45
COPS3-215ENST00000578317 PGPA6NDG6 321 aa5.98□□□□□ -1.45
COPS3-215ENST00000578317 OR4C46A6NHA9 309 aa5.98□□□□□ -1.45
COPS3-215ENST00000578317 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.98□□□□□ -1.45
COPS3-215ENST00000578317 GGTLC3B5MD39 225 aa5.98□□□□□ -1.45
COPS3-215ENST00000578317 DNASE2O00115 360 aaPredicted RBP5.98□□□□□ -1.45
COPS3-215ENST00000578317 SLC17A3O00476 420 aa5.98□□□□□ -1.45
COPS3-215ENST00000578317 SPRY2O43597 315 aa5.98□□□□□ -1.45
COPS3-215ENST00000578317 SNRPCP09234 159 aaKnown RBP5.98□□□□□ -1.45
COPS3-215ENST00000578317 CMC4P56277 68 aaPredicted RBP5.98□□□□□ -1.45
COPS3-215ENST00000578317 SUMO2P61956 95 aaKnown RBP5.98□□□□□ -1.45
COPS3-215ENST00000578317 MEF2BQ02080 365 aaPredicted RBP5.98□□□□□ -1.45
COPS3-215ENST00000578317 RXFP4Q8TDU9 374 aa5.98□□□□□ -1.45
COPS3-215ENST00000578317 HIST1H2BAQ96A08 127 aa5.98□□□□□ -1.45
COPS3-215ENST00000578317 Q9H3A6 140 aa5.98□□□□□ -1.45
COPS3-215ENST00000578317 AURKAIP1Q9NWT8 199 aaPredicted RBP5.98□□□□□ -1.45
COPS3-215ENST00000578317 ZMAT5Q9UDW3 170 aaKnown RBP5.98□□□□□ -1.45
COPS3-215ENST00000578317 IZUMO1RA6ND01 250 aa5.97□□□□□ -1.45
COPS3-215ENST00000578317 C11orf94C9JXX5 98 aa5.97□□□□□ -1.45
COPS3-215ENST00000578317 H3BTX0 84 aa5.97□□□□□ -1.45
COPS3-215ENST00000578317 PDE6DO43924 150 aa5.97□□□□□ -1.45
COPS3-215ENST00000578317 IGLL1P15814 213 aa5.97□□□□□ -1.45
COPS3-215ENST00000578317 CD81P60033 236 aa5.97□□□□□ -1.45
COPS3-215ENST00000578317 UBE2G2P60604 165 aa5.97□□□□□ -1.45
COPS3-215ENST00000578317 SNRPD3P62318 126 aaKnown RBP5.97□□□□□ -1.45
COPS3-215ENST00000578317 ICAM4Q14773 271 aa5.97□□□□□ -1.45
COPS3-215ENST00000578317 PEA15Q15121 130 aa5.97□□□□□ -1.45
COPS3-215ENST00000578317 PSG3Q16557 428 aa5.97□□□□□ -1.45
COPS3-215ENST00000578317 NDUFA5Q16718 116 aa5.97□□□□□ -1.45
COPS3-215ENST00000578317 HAGHQ16775 308 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms