RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 LOC105371242A0A075B767 164 aa10.84□□□□□ -0.67
NDEL1-204ENST00000578172 TRAV8-6A0A0B4J262 113 aa10.84□□□□□ -0.67
NDEL1-204ENST00000578172 RNF182Q8N6D2 247 aa10.84□□□□□ -0.67
NDEL1-204ENST00000578172 TMEM189A5PLL7 270 aa10.83□□□□□ -0.68
NDEL1-204ENST00000578172 NDPQ00604 133 aa10.83□□□□□ -0.68
NDEL1-204ENST00000578172 A0A1B0GUT8 65 aa10.83□□□□□ -0.68
NDEL1-204ENST00000578172 H3BVH4 76 aa10.83□□□□□ -0.68
NDEL1-204ENST00000578172 ITGB1BP1O14713 200 aa10.83□□□□□ -0.68
NDEL1-204ENST00000578172 PSG9Q00887 426 aa10.83□□□□□ -0.68
NDEL1-204ENST00000578172 LY6EQ16553 131 aa10.83□□□□□ -0.68
NDEL1-204ENST00000578172 ABCA2Q9BZC7 2435 aa10.83□□□□□ -0.68
NDEL1-204ENST00000578172 IGLC1P0CG04 106 aa10.83□□□□□ -0.68
NDEL1-204ENST00000578172 ERCC8Q13216 396 aa10.83□□□□□ -0.68
NDEL1-204ENST00000578172 RIGQ13278 110 aa10.83□□□□□ -0.68
NDEL1-204ENST00000578172 LOC107984156A0A0G2JMH3 177 aa10.82□□□□□ -0.68
NDEL1-204ENST00000578172 A1L4Q6 167 aa10.82□□□□□ -0.68
NDEL1-204ENST00000578172 NBR2O15453 112 aa10.82□□□□□ -0.68
NDEL1-204ENST00000578172 CEACAM4O75871 244 aa10.82□□□□□ -0.68
NDEL1-204ENST00000578172 PAX1P15863 534 aa10.82□□□□□ -0.68
NDEL1-204ENST00000578172 TMEM249Q2WGJ8 235 aa10.82□□□□□ -0.68
NDEL1-204ENST00000578172 IGFL3Q6UXB1 125 aa10.82□□□□□ -0.68
NDEL1-204ENST00000578172 SPATA12Q7Z6I5 190 aa10.82□□□□□ -0.68
NDEL1-204ENST00000578172 ARL17AQ8IVW1 177 aa10.82□□□□□ -0.68
NDEL1-204ENST00000578172 OR10AG1Q8NH19 301 aa10.82□□□□□ -0.68
NDEL1-204ENST00000578172 FAM106CPP0CH98 169 aa10.82□□□□□ -0.68
NDEL1-204ENST00000578172 SCGB1C2P0DMR2 95 aa10.82□□□□□ -0.68
NDEL1-204ENST00000578172 FAM106AQ4KMX7 169 aa10.82□□□□□ -0.68
NDEL1-204ENST00000578172 Q86TA4 180 aa10.82□□□□□ -0.68
NDEL1-204ENST00000578172 OR2K2Q8NGT1 345 aa10.82□□□□□ -0.68
NDEL1-204ENST00000578172 TRAV9-1A0A075B6T8 112 aa10.82□□□□□ -0.68
NDEL1-204ENST00000578172 TRAV30A0A087WSZ9 112 aa10.82□□□□□ -0.68
NDEL1-204ENST00000578172 SAP30O75446 220 aa10.82□□□□□ -0.68
NDEL1-204ENST00000578172 TGFAP01135 160 aa10.82□□□□□ -0.68
NDEL1-204ENST00000578172 IGKV1-17P01599 117 aa10.82□□□□□ -0.68
NDEL1-204ENST00000578172 CKS2P33552 79 aa10.82□□□□□ -0.68
NDEL1-204ENST00000578172 SAMD13Q5VXD3 122 aa10.82□□□□□ -0.68
NDEL1-204ENST00000578172 D6R8Y8 96 aa10.81□□□□□ -0.68
NDEL1-204ENST00000578172 CIDEAO60543 219 aa10.81□□□□□ -0.68
NDEL1-204ENST00000578172 IFI27P40305 119 aaPredicted RBP10.81□□□□□ -0.68
NDEL1-204ENST00000578172 LY96Q9Y6Y9 160 aa10.81□□□□□ -0.68
NDEL1-204ENST00000578172 IGHV1-24A0A0C4DH33 117 aa10.81□□□□□ -0.68
NDEL1-204ENST00000578172 CACNG7P62955 275 aa10.81□□□□□ -0.68
NDEL1-204ENST00000578172 LYZL1Q6UWQ5 148 aa10.81□□□□□ -0.68
NDEL1-204ENST00000578172 CLEC19AQ6UXS0 136 aa10.81□□□□□ -0.68
NDEL1-204ENST00000578172 CLEC3BP05452 202 aa10.81□□□□□ -0.68
NDEL1-204ENST00000578172 TMEM97Q5BJF2 176 aa10.81□□□□□ -0.68
NDEL1-204ENST00000578172 GLMPQ8WWB7 406 aa10.81□□□□□ -0.68
NDEL1-204ENST00000578172 G3V318 75 aa10.8□□□□□ -0.68
NDEL1-204ENST00000578172 FMC1Q96HJ9 113 aa10.8□□□□□ -0.68
NDEL1-204ENST00000578172 TRGV9Q99603 122 aa10.8□□□□□ -0.68
NDEL1-204ENST00000578172 C21orf62Q9NYP8 219 aa10.8□□□□□ -0.68
NDEL1-204ENST00000578172 NDUFB8O95169 186 aa10.8□□□□□ -0.68
NDEL1-204ENST00000578172 IGHV3-11P01762 117 aa10.8□□□□□ -0.68
NDEL1-204ENST00000578172 SRD5A1P18405 259 aa10.8□□□□□ -0.68
NDEL1-204ENST00000578172 OR1N2Q8NGR9 330 aa10.8□□□□□ -0.68
NDEL1-204ENST00000578172 NHP2Q9NX24 153 aaKnown RBP10.8□□□□□ -0.68
NDEL1-204ENST00000578172 DEFB1P60022 68 aa10.8□□□□□ -0.68
NDEL1-204ENST00000578172 PRSS57Q6UWY2 283 aa10.8□□□□□ -0.68
NDEL1-204ENST00000578172 SCGB1D4Q6XE38 83 aa10.8□□□□□ -0.68
NDEL1-204ENST00000578172 SYS1-DBNDD2H3BUS1 97 aa10.79□□□□□ -0.68
NDEL1-204ENST00000578172 MFAP4P55083 255 aa10.79□□□□□ -0.68
NDEL1-204ENST00000578172 ARPC1AQ92747 370 aa10.79□□□□□ -0.68
NDEL1-204ENST00000578172 CELSR1Q9NYQ6 3014 aa10.79□□□□□ -0.68
NDEL1-204ENST00000578172 PSMB11A5LHX3 300 aa10.79□□□□□ -0.68
NDEL1-204ENST00000578172 FAM231BA6NCW3 169 aa10.79□□□□□ -0.68
NDEL1-204ENST00000578172 GP9P14770 177 aa10.79□□□□□ -0.68
NDEL1-204ENST00000578172 CEACAM3P40198 252 aa10.79□□□□□ -0.68
NDEL1-204ENST00000578172 MBD6Q96DN6 1003 aa10.79□□□□□ -0.68
NDEL1-204ENST00000578172 K7EMI3 77 aa10.79□□□□□ -0.68
NDEL1-204ENST00000578172 LCNL1Q6ZST4 164 aa10.79□□□□□ -0.68
NDEL1-204ENST00000578172 OTORQ9NRC9 128 aa10.79□□□□□ -0.68
NDEL1-204ENST00000578172 MSRB1Q9NZV6 116 aa10.79□□□□□ -0.68
NDEL1-204ENST00000578172 LOXL1Q08397 574 aaPredicted RBP10.78□□□□□ -0.68
NDEL1-204ENST00000578172 FAM120AOSQ5T036 256 aa10.78□□□□□ -0.68
NDEL1-204ENST00000578172 BRD3OSQ6XYD6 125 aa10.78□□□□□ -0.68
NDEL1-204ENST00000578172 ZNF414Q96IQ9 312 aa10.78□□□□□ -0.68
NDEL1-204ENST00000578172 TOMM40O96008 361 aa10.78□□□□□ -0.68
NDEL1-204ENST00000578172 TMEM160Q9NX00 188 aa10.78□□□□□ -0.68
NDEL1-204ENST00000578172 TEX22C9J3V5 150 aa10.78□□□□□ -0.68
NDEL1-204ENST00000578172 H7C2G1 150 aa10.78□□□□□ -0.68
NDEL1-204ENST00000578172 PRELID3AQ96N28 172 aa10.78□□□□□ -0.68
NDEL1-204ENST00000578172 SRSF9Q13242 221 aaKnown RBP eCLIP10.78□□□□□ -0.68
NDEL1-204ENST00000578172 VMO1Q7Z5L0 202 aa10.78□□□□□ -0.68
NDEL1-204ENST00000578172 VGLL1Q99990 258 aa10.78□□□□□ -0.68
NDEL1-204ENST00000578172 MRPS16Q9Y3D3 137 aaKnown RBP10.78□□□□□ -0.68
NDEL1-204ENST00000578172 FNDC10F2Z333 226 aa10.77□□□□□ -0.69
NDEL1-204ENST00000578172 ATP5IP56385 69 aaPredicted RBP10.77□□□□□ -0.69
NDEL1-204ENST00000578172 JKAMPQ9P055 326 aa10.77□□□□□ -0.69
NDEL1-204ENST00000578172 GATA1P15976 413 aaPredicted RBP10.77□□□□□ -0.69
NDEL1-204ENST00000578172 THAP8Q8NA92 274 aa10.77□□□□□ -0.69
NDEL1-204ENST00000578172 NAV2Q8IVL1 2488 aa10.77□□□□□ -0.69
NDEL1-204ENST00000578172 K7EIM0 57 aa10.77□□□□□ -0.69
NDEL1-204ENST00000578172 DYNAPQ8N1N2 210 aa10.77□□□□□ -0.69
NDEL1-204ENST00000578172 Q8N976 141 aa10.77□□□□□ -0.69
NDEL1-204ENST00000578172 HIST1H4GQ99525 98 aa10.77□□□□□ -0.69
NDEL1-204ENST00000578172 ST20Q9HBF5 79 aa10.77□□□□□ -0.69
NDEL1-204ENST00000578172 A0A0G2JLM5 398 aa10.76□□□□□ -0.69
NDEL1-204ENST00000578172 IGKV3-20P01619 116 aa10.76□□□□□ -0.69
NDEL1-204ENST00000578172 RPL7P18124 248 aaKnown RBP10.76□□□□□ -0.69
NDEL1-204ENST00000578172 ZNF491Q8N8L2 437 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms