RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 PEF1Q9UBV8 284 aaKnown RBP4.22□□□□□ -1.73
VAPA-203ENST00000577539 OR2J3O76001 311 aa4.21□□□□□ -1.74
VAPA-203ENST00000577539 HLA-DRB1P01911 266 aa4.21□□□□□ -1.74
VAPA-203ENST00000577539 MYCNOSP40205 109 aa4.21□□□□□ -1.74
VAPA-203ENST00000577539 LDLRAD2Q5SZI1 272 aa4.21□□□□□ -1.74
VAPA-203ENST00000577539 Q86TA4 180 aa4.21□□□□□ -1.74
VAPA-203ENST00000577539 GTSF1Q8WW33 167 aa4.21□□□□□ -1.74
VAPA-203ENST00000577539 UQCR10Q9UDW1 63 aa4.21□□□□□ -1.74
VAPA-203ENST00000577539 I3L2K1 104 aa4.21□□□□□ -1.74
VAPA-203ENST00000577539 CRYGBP07316 175 aa4.21□□□□□ -1.74
VAPA-203ENST00000577539 HINT1P49773 126 aaPredicted RBP4.21□□□□□ -1.74
VAPA-203ENST00000577539 PRR25Q96S07 402 aa4.21□□□□□ -1.74
VAPA-203ENST00000577539 CITED1Q99966 193 aa4.21□□□□□ -1.74
VAPA-203ENST00000577539 MCRIP2Q9BUT9 160 aaKnown RBP4.21□□□□□ -1.74
VAPA-203ENST00000577539 AAMDCQ9H7C9 122 aa4.21□□□□□ -1.74
VAPA-203ENST00000577539 DCHS1Q96JQ0 3298 aa4.21□□□□□ -1.74
VAPA-203ENST00000577539 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.2□□□□□ -1.74
VAPA-203ENST00000577539 FAM181BA6NEQ2 426 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 K7EIM0 57 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 BRI3O95415 125 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 CSN1S1P47710 185 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 CDSNQ15517 529 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 RASL11AQ6T310 242 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 SIRPDQ9H106 197 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 MRPL27Q9P0M9 148 aaKnown RBP4.2□□□□□ -1.74
VAPA-203ENST00000577539 PSG8Q9UQ74 426 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 KLF12Q9Y4X4 402 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 LEPROTL1O95214 131 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 LTAP01374 205 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 IGFL4Q6B9Z1 124 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 EBLN2Q6P2I7 272 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 ATP5L2Q7Z4Y8 100 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 DTX2Q86UW9 622 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 WIPF2Q8TF74 440 aaPredicted RBP4.2□□□□□ -1.74
VAPA-203ENST00000577539 PMCHL2Q9BQD1 86 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 MLST8Q9BVC4 326 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 LPAR2Q9HBW0 351 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 HIVEP3Q5T1R4 2406 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 IGHV3OR16-13A0A075B7E8 117 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 IGHV3-74A0A0B4J1X5 117 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 C20orf202A1L168 122 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 OR2T8A6NH00 312 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 NDUFS7O75251 213 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 SLURP1P55000 103 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 ECSCRQ19T08 205 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 C5orf64Q2M2E5 130 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 BEAN1Q3B7T3 259 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 LINC00173Q6ZV60 143 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 ZNF491Q8N8L2 437 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 Q8N976 141 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 SHANK2-AS3Q9BTD1 123 aa4.2□□□□□ -1.74
VAPA-203ENST00000577539 TRBV19A0A075B6N1 114 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 LOC389332A0A1B0GUA5 103 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 A0A1B0GUT8 65 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 ARMS2P0C7Q2 107 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 IGLC2P0DOY2 106 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 IGLC3P0DOY3 106 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 PLP1P60201 277 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 RIGQ13278 110 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 COL5A1-AS1Q5SY13 56 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 FAM162BQ5T6X4 162 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 PVRIGQ6DKI7 326 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 PRSS3P2Q8NHM4 247 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 ARPC1AQ92747 370 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 ZC2HC1AQ96GY0 325 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 TMEM70Q9BUB7 260 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 C21orf62Q9NYP8 219 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 ZNF492Q9P255 531 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 OR4C46A6NHA9 309 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 FA2HQ7L5A8 372 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 S100A7AQ86SG5 101 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 RNF5Q99942 180 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 UBTD1Q9HAC8 227 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 LAMTOR2Q9Y2Q5 125 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 SMG1Q96Q15 3661 aaKnown RBP4.19□□□□□ -1.74
VAPA-203ENST00000577539 IGKV2-40A0A087WW87 121 aaPredicted RBP4.19□□□□□ -1.74
VAPA-203ENST00000577539 IGHV3-66A0A0C4DH42 116 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 A0A1B0GXF2 115 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 C19orf71A6NCJ1 209 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 NDUFB8O95169 186 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 IGKV2D-40P01614 121 aaPredicted RBP4.19□□□□□ -1.74
VAPA-203ENST00000577539 LINC00614P0C842 121 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 C8orf49Q96NF6 230 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 TMEM208Q9BTX3 173 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 PRSS22Q9GZN4 317 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 THYN1Q9P016 225 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 GOLT1BQ9Y3E0 138 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 SPENQ96T58 3664 aaKnown RBP4.19□□□□□ -1.74
VAPA-203ENST00000577539 TACC2O95359 2948 aa4.19□□□□□ -1.74
VAPA-203ENST00000577539 TRAV9-2A0A087WT02 112 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 LOC102724200A0A096LPH7 203 aaPredicted RBP4.18□□□□□ -1.74
VAPA-203ENST00000577539 IGHV3-49A0A0A0MS15 119 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 A0A0U1RRA0 63 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 H3BRN7 92 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 PRTN3P24158 256 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 TCTAP57738 103 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 KLRB1Q12918 225 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 VMO1Q7Z5L0 202 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 Q8TAT8 98 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 SMIM12Q96EX1 92 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms