RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 SNURFLB1AK76 121 aa8.17□□□□□ -1.1
CDH8-202ENST00000577228 FNDC10F2Z333 226 aa8.17□□□□□ -1.1
CDH8-202ENST00000577228 K7EPK0 472 aa8.17□□□□□ -1.1
CDH8-202ENST00000577228 SNRPCP09234 159 aaKnown RBP8.17□□□□□ -1.1
CDH8-202ENST00000577228 METTL15P1P0C7V9 234 aa8.17□□□□□ -1.1
CDH8-202ENST00000577228 HOXA5P20719 270 aa8.17□□□□□ -1.1
CDH8-202ENST00000577228 DEFA1P59665 94 aa8.17□□□□□ -1.1
CDH8-202ENST00000577228 DEFA3P59666 94 aa8.17□□□□□ -1.1
CDH8-202ENST00000577228 UBE2MP61081 183 aaKnown RBP8.17□□□□□ -1.1
CDH8-202ENST00000577228 ESRGQ1W209 222 aa8.17□□□□□ -1.1
CDH8-202ENST00000577228 PXDC1Q5TGL8 231 aa8.17□□□□□ -1.1
CDH8-202ENST00000577228 GFI1BQ5VTD9 330 aa8.17□□□□□ -1.1
CDH8-202ENST00000577228 SMIM8Q96KF7 97 aa8.17□□□□□ -1.1
CDH8-202ENST00000577228 NPVFQ9HCQ7 196 aa8.17□□□□□ -1.1
CDH8-202ENST00000577228 NUDT15Q9NV35 164 aa8.17□□□□□ -1.1
CDH8-202ENST00000577228 ZNF586Q9NXT0 402 aa8.17□□□□□ -1.1
CDH8-202ENST00000577228 MGAT4CQ9UBM8 478 aa8.17□□□□□ -1.1
CDH8-202ENST00000577228 APOBP04114 4563 aaKnown RBP8.16□□□□□ -1.1
CDH8-202ENST00000577228 H3BNG1 76 aa8.16□□□□□ -1.1
CDH8-202ENST00000577228 GOSR2O14653 212 aa8.16□□□□□ -1.1
CDH8-202ENST00000577228 H2AFB2P0C5Z0 115 aa8.16□□□□□ -1.1
CDH8-202ENST00000577228 TEPPQ6URK8 271 aa8.16□□□□□ -1.1
CDH8-202ENST00000577228 TMEM14EPQ6UXP3 125 aa8.16□□□□□ -1.1
CDH8-202ENST00000577228 LINC00305Q7Z4B0 112 aa8.16□□□□□ -1.1
CDH8-202ENST00000577228 ZNF546Q86UE3 836 aa8.16□□□□□ -1.1
CDH8-202ENST00000577228 OR10P1Q8NGE3 313 aa8.16□□□□□ -1.1
CDH8-202ENST00000577228 ENKURQ8TC29 256 aa8.16□□□□□ -1.1
CDH8-202ENST00000577228 C9orf170A2RU37 121 aa8.15□□□□□ -1.1
CDH8-202ENST00000577228 PRAC2D3DTV9 90 aa8.15□□□□□ -1.1
CDH8-202ENST00000577228 H3BTX0 84 aa8.15□□□□□ -1.1
CDH8-202ENST00000577228 J3KRW8 73 aa8.15□□□□□ -1.1
CDH8-202ENST00000577228 SLC17A3O00476 420 aa8.15□□□□□ -1.1
CDH8-202ENST00000577228 OR4E1P0C645 316 aa8.15□□□□□ -1.1
CDH8-202ENST00000577228 LEPP41159 167 aa8.15□□□□□ -1.1
CDH8-202ENST00000577228 BPIFA4PQ86YQ2 179 aa8.15□□□□□ -1.1
CDH8-202ENST00000577228 TMPRSS5Q9H3S3 457 aa8.15□□□□□ -1.1
CDH8-202ENST00000577228 PXMP4Q9Y6I8 212 aa8.15□□□□□ -1.1
CDH8-202ENST00000577228 DNAH5Q8TE73 4624 aa8.14□□□□□ -1.11
CDH8-202ENST00000577228 AGPAT2O15120 278 aa8.14□□□□□ -1.11
CDH8-202ENST00000577228 COX7A2P2O60397 106 aa8.14□□□□□ -1.11
CDH8-202ENST00000577228 SCGB1D2O95969 90 aa8.14□□□□□ -1.11
CDH8-202ENST00000577228 LINC00315P59091 139 aa8.14□□□□□ -1.11
CDH8-202ENST00000577228 C4orf46Q504U0 113 aa8.14□□□□□ -1.11
CDH8-202ENST00000577228 SEC22CQ9BRL7 303 aa8.14□□□□□ -1.11
CDH8-202ENST00000577228 TRAV12-3A0A0B4J271 114 aa8.13□□□□□ -1.11
CDH8-202ENST00000577228 TSC22D2O75157 780 aa8.13□□□□□ -1.11
CDH8-202ENST00000577228 PTTG1O95997 202 aa8.13□□□□□ -1.11
CDH8-202ENST00000577228 CT45A10P0DMU9 189 aa8.13□□□□□ -1.11
CDH8-202ENST00000577228 TAS2R30P59541 319 aa8.13□□□□□ -1.11
CDH8-202ENST00000577228 DAZ2Q13117 558 aaKnown RBP8.13□□□□□ -1.11
CDH8-202ENST00000577228 OPCMLQ14982 345 aa8.13□□□□□ -1.11
CDH8-202ENST00000577228 Q6ZTI0 123 aa8.13□□□□□ -1.11
CDH8-202ENST00000577228 ZBTB8BQ8NAP8 495 aaPredicted RBP8.13□□□□□ -1.11
CDH8-202ENST00000577228 ODF3Q96PU9 254 aa8.13□□□□□ -1.11
CDH8-202ENST00000577228 PYGO2Q9BRQ0 406 aa8.13□□□□□ -1.11
CDH8-202ENST00000577228 MARVELD1Q9BSK0 173 aa8.13□□□□□ -1.11
CDH8-202ENST00000577228 TRGV2A0A075B6R0 118 aa8.12□□□□□ -1.11
CDH8-202ENST00000577228 A0A096LPF7 62 aa8.12□□□□□ -1.11
CDH8-202ENST00000577228 EPM2AB3EWF7 344 aa8.12□□□□□ -1.11
CDH8-202ENST00000577228 NPIPB6E9PJ23 425 aa8.12□□□□□ -1.11
CDH8-202ENST00000577228 INMT-MINDY4F8WBC2 141 aa8.12□□□□□ -1.11
CDH8-202ENST00000577228 H3BQ15 152 aa8.12□□□□□ -1.11
CDH8-202ENST00000577228 IGLC2P0DOY2 106 aa8.12□□□□□ -1.11
CDH8-202ENST00000577228 ARL16Q0P5N6 197 aa8.12□□□□□ -1.11
CDH8-202ENST00000577228 IAH1Q2TAA2 248 aaPredicted RBP8.12□□□□□ -1.11
CDH8-202ENST00000577228 MORN5Q5VZ52 161 aa8.12□□□□□ -1.11
CDH8-202ENST00000577228 C10orf113Q5VZT2 155 aa8.12□□□□□ -1.11
CDH8-202ENST00000577228 Q6ZRN7 208 aaPredicted RBP8.12□□□□□ -1.11
CDH8-202ENST00000577228 TMEM37Q8WXS4 190 aa8.12□□□□□ -1.11
CDH8-202ENST00000577228 VSIG2Q96IQ7 327 aa8.12□□□□□ -1.11
CDH8-202ENST00000577228 MGST2Q99735 147 aa8.12□□□□□ -1.11
CDH8-202ENST00000577228 GGACTQ9BVM4 153 aa8.12□□□□□ -1.11
CDH8-202ENST00000577228 RCL1Q9Y2P8 373 aaKnown RBP8.12□□□□□ -1.11
CDH8-202ENST00000577228 EREGO14944 169 aa8.11□□□□□ -1.11
CDH8-202ENST00000577228 SIVA1O15304 175 aa8.11□□□□□ -1.11
CDH8-202ENST00000577228 GUK1Q16774 197 aa8.11□□□□□ -1.11
CDH8-202ENST00000577228 RGS21Q2M5E4 152 aa8.11□□□□□ -1.11
CDH8-202ENST00000577228 ZNF680Q8NEM1 530 aa8.11□□□□□ -1.11
CDH8-202ENST00000577228 ZNF431Q8TF32 576 aaPredicted RBP8.11□□□□□ -1.11
CDH8-202ENST00000577228 MITD1Q8WV92 249 aa8.11□□□□□ -1.11
CDH8-202ENST00000577228 SAT2Q96F10 170 aaPredicted RBP8.11□□□□□ -1.11
CDH8-202ENST00000577228 GSN-AS1Q9NRJ2 163 aa8.11□□□□□ -1.11
CDH8-202ENST00000577228 GSKIPQ9P0R6 139 aa8.11□□□□□ -1.11
CDH8-202ENST00000577228 TRGV1A0A0A0MS02 117 aa8.1□□□□□ -1.11
CDH8-202ENST00000577228 C7orf71A4D174 169 aa8.1□□□□□ -1.11
CDH8-202ENST00000577228 SLC25A5P05141 298 aaKnown RBP8.1□□□□□ -1.11
CDH8-202ENST00000577228 ERVFC1-1P60608 527 aa8.1□□□□□ -1.11
CDH8-202ENST00000577228 C11orf72Q8NBR9 251 aa8.1□□□□□ -1.11
CDH8-202ENST00000577228 C18orf15Q96N68 181 aa8.1□□□□□ -1.11
CDH8-202ENST00000577228 DNAJC4Q9NNZ3 241 aa8.1□□□□□ -1.11
CDH8-202ENST00000577228 PGPEP1Q9NXJ5 209 aa8.1□□□□□ -1.11
CDH8-202ENST00000577228 FUT9Q9Y231 359 aa8.1□□□□□ -1.11
CDH8-202ENST00000577228 TRAV5A0A0B4J249 113 aa8.09□□□□□ -1.11
CDH8-202ENST00000577228 C7orf66A4D0T2 115 aa8.09□□□□□ -1.11
CDH8-202ENST00000577228 L7N2F9 121 aa8.09□□□□□ -1.11
CDH8-202ENST00000577228 NXPH4O95158 308 aa8.09□□□□□ -1.11
CDH8-202ENST00000577228 MBPP02686 304 aaPredicted RBP8.09□□□□□ -1.11
CDH8-202ENST00000577228 FUSP35637 526 aaKnown RBP eCLIP8.09□□□□□ -1.11
CDH8-202ENST00000577228 CAMLGP49069 296 aa8.09□□□□□ -1.11
CDH8-202ENST00000577228 VAMP2P63027 116 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms