RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 FAM106CPP0CH98 169 aa6.95□□□□□ -1.3
NCBP3-204ENST00000574911 FAM104BQ5XKR9 115 aa6.95□□□□□ -1.3
NCBP3-204ENST00000574911 FAM110DQ8TAY7 271 aaPredicted RBP6.95□□□□□ -1.3
NCBP3-204ENST00000574911 AP5S1Q9NUS5 200 aa6.95□□□□□ -1.3
NCBP3-204ENST00000574911 TMSB15BA0A087X1C1 80 aa6.95□□□□□ -1.3
NCBP3-204ENST00000574911 IGHV2-70DA0A0C4DH43 119 aa6.95□□□□□ -1.3
NCBP3-204ENST00000574911 TMEM213A2RRL7 107 aa6.95□□□□□ -1.3
NCBP3-204ENST00000574911 NDUFS7O75251 213 aa6.95□□□□□ -1.3
NCBP3-204ENST00000574911 UBE2E1P51965 193 aa6.95□□□□□ -1.3
NCBP3-204ENST00000574911 RPS20P60866 119 aaKnown RBP6.95□□□□□ -1.3
NCBP3-204ENST00000574911 LINC01545Q5VT33 79 aa6.95□□□□□ -1.3
NCBP3-204ENST00000574911 FA2HQ7L5A8 372 aa6.95□□□□□ -1.3
NCBP3-204ENST00000574911 ZNF575Q86XF7 245 aa6.95□□□□□ -1.3
NCBP3-204ENST00000574911 ZNF502Q8TBZ5 544 aa6.95□□□□□ -1.3
NCBP3-204ENST00000574911 PSMG3-AS1Q96PY0 264 aa6.95□□□□□ -1.3
NCBP3-204ENST00000574911 VGLL1Q99990 258 aa6.95□□□□□ -1.3
NCBP3-204ENST00000574911 ZNF747Q9BV97 191 aa6.95□□□□□ -1.3
NCBP3-204ENST00000574911 MAP1BP46821 2468 aaKnown RBP6.95□□□□□ -1.3
NCBP3-204ENST00000574911 J3KRW8 73 aa6.94□□□□□ -1.3
NCBP3-204ENST00000574911 HLA-DMBP28068 263 aa6.94□□□□□ -1.3
NCBP3-204ENST00000574911 S100A7P31151 101 aa6.94□□□□□ -1.3
NCBP3-204ENST00000574911 ZNF80P51504 273 aaPredicted RBP6.94□□□□□ -1.3
NCBP3-204ENST00000574911 SRSF2Q01130 221 aaKnown RBP6.94□□□□□ -1.3
NCBP3-204ENST00000574911 PRSS3P2Q8NHM4 247 aa6.94□□□□□ -1.3
NCBP3-204ENST00000574911 ORAOV1Q8WV07 137 aa6.94□□□□□ -1.3
NCBP3-204ENST00000574911 ZFAND3Q9H8U3 227 aa6.94□□□□□ -1.3
NCBP3-204ENST00000574911 SCRT2Q9NQ03 307 aa6.94□□□□□ -1.3
NCBP3-204ENST00000574911 A0A087X0K7 114 aa6.94□□□□□ -1.3
NCBP3-204ENST00000574911 D6R8Y8 96 aa6.94□□□□□ -1.3
NCBP3-204ENST00000574911 BMI1P35226 326 aa6.94□□□□□ -1.3
NCBP3-204ENST00000574911 IFI27P40305 119 aaPredicted RBP6.94□□□□□ -1.3
NCBP3-204ENST00000574911 OR10AG1Q8NH19 301 aa6.94□□□□□ -1.3
NCBP3-204ENST00000574911 MS4A6AQ9H2W1 248 aa6.94□□□□□ -1.3
NCBP3-204ENST00000574911 ARHGAP32A7KAX9 2087 aa6.94□□□□□ -1.3
NCBP3-204ENST00000574911 DCHS1Q96JQ0 3298 aa6.94□□□□□ -1.3
NCBP3-204ENST00000574911 DCHS2Q6V1P9 2916 aa6.94□□□□□ -1.3
NCBP3-204ENST00000574911 MUC6Q6W4X9 2439 aa6.93□□□□□ -1.3
NCBP3-204ENST00000574911 IGLC6P0CF74 106 aa6.93□□□□□ -1.3
NCBP3-204ENST00000574911 FAM106AQ4KMX7 169 aa6.93□□□□□ -1.3
NCBP3-204ENST00000574911 MRPL51Q4U2R6 128 aaKnown RBP6.93□□□□□ -1.3
NCBP3-204ENST00000574911 IGFL4Q6B9Z1 124 aa6.93□□□□□ -1.3
NCBP3-204ENST00000574911 AMN1Q8IY45 258 aa6.93□□□□□ -1.3
NCBP3-204ENST00000574911 Q8TAT8 98 aa6.93□□□□□ -1.3
NCBP3-204ENST00000574911 MCRIP2Q9BUT9 160 aaKnown RBP6.93□□□□□ -1.3
NCBP3-204ENST00000574911 SIGLEC8Q9NYZ4 499 aa6.93□□□□□ -1.3
NCBP3-204ENST00000574911 TP73-AS1Q9UF72 201 aa6.93□□□□□ -1.3
NCBP3-204ENST00000574911 A0A096LNJ9 63 aa6.93□□□□□ -1.3
NCBP3-204ENST00000574911 HSBP1L1C9JCN9 74 aa6.93□□□□□ -1.3
NCBP3-204ENST00000574911 GPR183P32249 361 aa6.93□□□□□ -1.3
NCBP3-204ENST00000574911 C15orf32Q32M92 178 aa6.93□□□□□ -1.3
NCBP3-204ENST00000574911 UNQ5815/PRO19632Q6UWF5 114 aa6.93□□□□□ -1.3
NCBP3-204ENST00000574911 ORMDL3Q8N138 153 aa6.93□□□□□ -1.3
NCBP3-204ENST00000574911 PRELID3AQ96N28 172 aa6.93□□□□□ -1.3
NCBP3-204ENST00000574911 ATP6V0E1O15342 81 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 EFNA4P52798 201 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 RHOGP84095 191 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 LOXL1Q08397 574 aaPredicted RBP6.92□□□□□ -1.3
NCBP3-204ENST00000574911 SLC25A34Q6PIV7 304 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 FER1L6-AS1Q8NA97 138 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 COX11Q9Y6N1 276 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 PTPRQQ9UMZ3 2332 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 IGHV3OR16-8A0A075B7F1 116 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 H0Y8G0 127 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 BUB3O43684 328 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 NCR2O95944 276 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 LRBAP50851 2863 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 RAB9AP51151 201 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 LMO4P61968 165 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 PAX8Q06710 450 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 ECSCRQ19T08 205 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 TIMM8BQ9Y5J9 83 aaPredicted RBP6.92□□□□□ -1.3
NCBP3-204ENST00000574911 IGHV3-35A0A0C4DH35 117 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 MUC21A0A0G2JKD1 596 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 MUC21A0A140T8X8 626 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 LOC389332A0A1B0GUA5 103 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 CLPSL1A2RUU4 121 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 PRAC2D3DTV9 90 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 CLEC3BP05452 202 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 SAA4P35542 130 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 ERCC8Q13216 396 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 MUC21Q5SSG8 566 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 UBTD1Q9HAC8 227 aa6.92□□□□□ -1.3
NCBP3-204ENST00000574911 ANKHD1Q8IWZ3 2542 aaKnown RBP6.91□□□□□ -1.3
NCBP3-204ENST00000574911 HRNRQ86YZ3 2850 aaPredicted RBP6.91□□□□□ -1.3
NCBP3-204ENST00000574911 CENPVL3A0A0U1RRI6 287 aa6.91□□□□□ -1.3
NCBP3-204ENST00000574911 RBAKDNA6NC62 111 aa6.91□□□□□ -1.3
NCBP3-204ENST00000574911 GOSR1O95249 250 aa6.91□□□□□ -1.3
NCBP3-204ENST00000574911 TWIST1Q15672 202 aa6.91□□□□□ -1.3
NCBP3-204ENST00000574911 Q6ZVH6 145 aa6.91□□□□□ -1.3
NCBP3-204ENST00000574911 CCDC140Q96MF4 163 aa6.91□□□□□ -1.3
NCBP3-204ENST00000574911 PMCHL2Q9BQD1 86 aa6.91□□□□□ -1.3
NCBP3-204ENST00000574911 CNFNQ9BYD5 112 aa6.91□□□□□ -1.3
NCBP3-204ENST00000574911 TLN1Q9Y490 2541 aaKnown RBP6.91□□□□□ -1.3
NCBP3-204ENST00000574911 LINC01548A6NM66 108 aa6.91□□□□□ -1.3
NCBP3-204ENST00000574911 FABP5P3A8MUU1 101 aa6.91□□□□□ -1.3
NCBP3-204ENST00000574911 MPV17L2Q567V2 206 aa6.91□□□□□ -1.3
NCBP3-204ENST00000574911 ZNF738Q8NE65 137 aa6.91□□□□□ -1.3
NCBP3-204ENST00000574911 SMKR1H3BMG3 65 aa6.9□□□□□ -1.3
NCBP3-204ENST00000574911 LINC01559Q495D7 138 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms