RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 MUC21A0A0G2JKD1 596 aa3.34□□□□□ -1.87
TOPBP1-210ENST00000572787 PINLYPA6NC86 204 aa3.34□□□□□ -1.87
TOPBP1-210ENST00000572787 K7EP34 96 aa3.34□□□□□ -1.87
TOPBP1-210ENST00000572787 SHBGP04278 402 aa3.34□□□□□ -1.87
TOPBP1-210ENST00000572787 CFC1P0CG37 223 aa3.34□□□□□ -1.87
TOPBP1-210ENST00000572787 COX7CP15954 63 aa3.34□□□□□ -1.87
TOPBP1-210ENST00000572787 PEBP1P30086 187 aaKnown RBP3.34□□□□□ -1.87
TOPBP1-210ENST00000572787 ASIPP42127 132 aa3.34□□□□□ -1.87
TOPBP1-210ENST00000572787 RPL28P46779 137 aaKnown RBP3.34□□□□□ -1.87
TOPBP1-210ENST00000572787 ATP5EP56381 51 aaPredicted RBP3.34□□□□□ -1.87
TOPBP1-210ENST00000572787 RPL26P61254 145 aaKnown RBP3.34□□□□□ -1.87
TOPBP1-210ENST00000572787 LPAL2Q16609 132 aa3.34□□□□□ -1.87
TOPBP1-210ENST00000572787 C2orf83Q53S99 150 aa3.34□□□□□ -1.87
TOPBP1-210ENST00000572787 SPRNQ5BIV9 151 aa3.34□□□□□ -1.87
TOPBP1-210ENST00000572787 Q8NDZ9 215 aa3.34□□□□□ -1.87
TOPBP1-210ENST00000572787 VSTM2AQ8TAG5 236 aa3.34□□□□□ -1.87
TOPBP1-210ENST00000572787 AQP3Q92482 292 aa3.34□□□□□ -1.87
TOPBP1-210ENST00000572787 TMEM242Q9NWH2 141 aa3.34□□□□□ -1.87
TOPBP1-210ENST00000572787 MYH6P13533 1939 aa3.34□□□□□ -1.88
TOPBP1-210ENST00000572787 EML6Q6ZMW3 1958 aa3.34□□□□□ -1.88
TOPBP1-210ENST00000572787 ERVK-7P63135 1459 aa3.34□□□□□ -1.88
TOPBP1-210ENST00000572787 SCAF11Q99590 1463 aaKnown RBP3.34□□□□□ -1.88
TOPBP1-210ENST00000572787 KIF13AQ9H1H9 1805 aa3.33□□□□□ -1.88
TOPBP1-210ENST00000572787 DSCAMO60469 2012 aa3.33□□□□□ -1.88
TOPBP1-210ENST00000572787 FAM168BA1KXE4 195 aa3.33□□□□□ -1.88
TOPBP1-210ENST00000572787 TMEM235A6NFC5 223 aa3.33□□□□□ -1.88
TOPBP1-210ENST00000572787 A6NN06 94 aa3.33□□□□□ -1.88
TOPBP1-210ENST00000572787 COLCA2A8K830 154 aa3.33□□□□□ -1.88
TOPBP1-210ENST00000572787 J3QLW9 94 aa3.33□□□□□ -1.88
TOPBP1-210ENST00000572787 K7EM74 188 aa3.33□□□□□ -1.88
TOPBP1-210ENST00000572787 CPSF4O95639 269 aaKnown RBP3.33□□□□□ -1.88
TOPBP1-210ENST00000572787 GYPAP02724 150 aa3.33□□□□□ -1.88
TOPBP1-210ENST00000572787 FXYD2P54710 66 aa3.33□□□□□ -1.88
TOPBP1-210ENST00000572787 FUT5Q11128 374 aa3.33□□□□□ -1.88
TOPBP1-210ENST00000572787 IGFL3Q6UXB1 125 aa3.33□□□□□ -1.88
TOPBP1-210ENST00000572787 FP248Q71RG6 208 aaPredicted RBP3.33□□□□□ -1.88
TOPBP1-210ENST00000572787 TSKUQ8WUA8 353 aa3.33□□□□□ -1.88
TOPBP1-210ENST00000572787 POP5Q969H6 163 aaKnown RBP3.33□□□□□ -1.88
TOPBP1-210ENST00000572787 IMMP1LQ96LU5 166 aa3.33□□□□□ -1.88
TOPBP1-210ENST00000572787 RETNLBQ9BQ08 111 aa3.33□□□□□ -1.88
TOPBP1-210ENST00000572787 NABP2Q9BQ15 211 aa3.33□□□□□ -1.88
TOPBP1-210ENST00000572787 RPRD2Q5VT52 1461 aaKnown RBP3.33□□□□□ -1.88
TOPBP1-210ENST00000572787 PLEKHH2Q8IVE3 1493 aa3.33□□□□□ -1.88
TOPBP1-210ENST00000572787 PCNX3Q9H6A9 2034 aa3.32□□□□□ -1.88
TOPBP1-210ENST00000572787 MDFIC2A0A1B0GVS7 189 aa3.32□□□□□ -1.88
TOPBP1-210ENST00000572787 A8MUU9 505 aa3.32□□□□□ -1.88
TOPBP1-210ENST00000572787 C17orf112F2Z3M2 114 aa3.32□□□□□ -1.88
TOPBP1-210ENST00000572787 F8W1H4 67 aa3.32□□□□□ -1.88
TOPBP1-210ENST00000572787 PROSCO94903 275 aa3.32□□□□□ -1.88
TOPBP1-210ENST00000572787 IGKV2-30P06310 120 aa3.32□□□□□ -1.88
TOPBP1-210ENST00000572787 SNCAP37840 140 aa3.32□□□□□ -1.88
TOPBP1-210ENST00000572787 ZNF117Q03924 483 aa3.32□□□□□ -1.88
TOPBP1-210ENST00000572787 ZC2HC1BQ5TFG8 222 aa3.32□□□□□ -1.88
TOPBP1-210ENST00000572787 UNQ5815/PRO19632Q6UWF5 114 aa3.32□□□□□ -1.88
TOPBP1-210ENST00000572787 C10orf105Q8TEF2 133 aa3.32□□□□□ -1.88
TOPBP1-210ENST00000572787 SPTSSAQ969W0 71 aa3.32□□□□□ -1.88
TOPBP1-210ENST00000572787 DSCR8Q96T75 97 aa3.32□□□□□ -1.88
TOPBP1-210ENST00000572787 REG4Q9BYZ8 158 aa3.32□□□□□ -1.88
TOPBP1-210ENST00000572787 SMCO4Q9NRQ5 59 aa3.32□□□□□ -1.88
TOPBP1-210ENST00000572787 TIMM9Q9Y5J7 89 aa3.32□□□□□ -1.88
TOPBP1-210ENST00000572787 COL3A1P02461 1466 aaPredicted RBP3.32□□□□□ -1.88
TOPBP1-210ENST00000572787 CCDC88AQ3V6T2 1871 aa3.32□□□□□ -1.88
TOPBP1-210ENST00000572787 DOCK8Q8NF50 2099 aa3.31□□□□□ -1.88
TOPBP1-210ENST00000572787 ALPK3Q96L96 1907 aa3.31□□□□□ -1.88
TOPBP1-210ENST00000572787 PSME4Q14997 1843 aa3.31□□□□□ -1.88
TOPBP1-210ENST00000572787 ADAMTS12P58397 1594 aa3.31□□□□□ -1.88
TOPBP1-210ENST00000572787 FANCAO15360 1455 aa3.31□□□□□ -1.88
TOPBP1-210ENST00000572787 EEA1Q15075 1411 aa3.31□□□□□ -1.88
TOPBP1-210ENST00000572787 IGKV1D-37A0A075B6S9 117 aa3.31□□□□□ -1.88
TOPBP1-210ENST00000572787 A0A0J9YWU9 116 aa3.31□□□□□ -1.88
TOPBP1-210ENST00000572787 E7EQL1 145 aa3.31□□□□□ -1.88
TOPBP1-210ENST00000572787 H3BPC8 53 aa3.31□□□□□ -1.88
TOPBP1-210ENST00000572787 LINC01565O15544 149 aa3.31□□□□□ -1.88
TOPBP1-210ENST00000572787 MRPS14O60783 128 aaKnown RBP3.31□□□□□ -1.88
TOPBP1-210ENST00000572787 IL5P05113 134 aa3.31□□□□□ -1.88
TOPBP1-210ENST00000572787 IGLV3-21P80748 117 aaPredicted RBP3.31□□□□□ -1.88
TOPBP1-210ENST00000572787 C15orf32Q32M92 178 aa3.31□□□□□ -1.88
TOPBP1-210ENST00000572787 SBSPONQ8IVN8 264 aa3.31□□□□□ -1.88
TOPBP1-210ENST00000572787 TYMSOSQ8TAI1 123 aa3.31□□□□□ -1.88
TOPBP1-210ENST00000572787 UQCR10Q9UDW1 63 aa3.31□□□□□ -1.88
TOPBP1-210ENST00000572787 LY96Q9Y6Y9 160 aa3.31□□□□□ -1.88
TOPBP1-210ENST00000572787 TRAV7A0A075B6U4 112 aa3.3□□□□□ -1.88
TOPBP1-210ENST00000572787 PIGBOS1A0A0B4J2F0 54 aa3.3□□□□□ -1.88
TOPBP1-210ENST00000572787 IGHV1-24A0A0C4DH33 117 aa3.3□□□□□ -1.88
TOPBP1-210ENST00000572787 TRBV10-2A0A0K0K1G8 114 aa3.3□□□□□ -1.88
TOPBP1-210ENST00000572787 UBE2L5PA0A1B0GUS4 154 aa3.3□□□□□ -1.88
TOPBP1-210ENST00000572787 hDV103S1A0JD37 113 aa3.3□□□□□ -1.88
TOPBP1-210ENST00000572787 RBAKDNA6NC62 111 aa3.3□□□□□ -1.88
TOPBP1-210ENST00000572787 C17orf98A8MV24 154 aa3.3□□□□□ -1.88
TOPBP1-210ENST00000572787 H3BQ85 93 aa3.3□□□□□ -1.88
TOPBP1-210ENST00000572787 GNRH2O43555 120 aa3.3□□□□□ -1.88
TOPBP1-210ENST00000572787 CYB5AP00167 134 aa3.3□□□□□ -1.88
TOPBP1-210ENST00000572787 APOC3P02656 99 aa3.3□□□□□ -1.88
TOPBP1-210ENST00000572787 DNAH10OSP0CZ25 163 aa3.3□□□□□ -1.88
TOPBP1-210ENST00000572787 PIPP12273 146 aaPredicted RBP3.3□□□□□ -1.88
TOPBP1-210ENST00000572787 RPS10P46783 165 aaKnown RBP3.3□□□□□ -1.88
TOPBP1-210ENST00000572787 UBE2L3P68036 154 aaKnown RBP3.3□□□□□ -1.88
TOPBP1-210ENST00000572787 ESRGQ1W209 222 aa3.3□□□□□ -1.88
TOPBP1-210ENST00000572787 Q6P435 159 aa3.3□□□□□ -1.88
TOPBP1-210ENST00000572787 LYZL1Q6UWQ5 148 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms