RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 ZNF586Q9NXT0 402 aa5.66□□□□□ -1.5
SMG6-211ENST00000572369 TMEM14CQ9P0S9 112 aa5.66□□□□□ -1.5
SMG6-211ENST00000572369 GOLT1BQ9Y3E0 138 aa5.66□□□□□ -1.5
SMG6-211ENST00000572369 TRBV19A0A075B6N1 114 aa5.65□□□□□ -1.5
SMG6-211ENST00000572369 IGHV4-28A0A0C4DH34 117 aa5.65□□□□□ -1.5
SMG6-211ENST00000572369 BOLA2-SMG1P6H3BVE0 249 aa5.65□□□□□ -1.5
SMG6-211ENST00000572369 M0R2Z0 102 aa5.65□□□□□ -1.5
SMG6-211ENST00000572369 ARPC5O15511 151 aa5.65□□□□□ -1.5
SMG6-211ENST00000572369 ZNF253O75346 499 aa5.65□□□□□ -1.5
SMG6-211ENST00000572369 NBEAP1P0C6P0 100 aa5.65□□□□□ -1.5
SMG6-211ENST00000572369 M6PRP20645 277 aa5.65□□□□□ -1.5
SMG6-211ENST00000572369 UBE2L3P68036 154 aaKnown RBP5.65□□□□□ -1.5
SMG6-211ENST00000572369 SPINK13Q1W4C9 94 aa5.65□□□□□ -1.5
SMG6-211ENST00000572369 FAM122CQ6P4D5 195 aa5.65□□□□□ -1.5
SMG6-211ENST00000572369 CSNK1G2-AS1Q8NCQ2 148 aa5.65□□□□□ -1.5
SMG6-211ENST00000572369 OR10G4Q8NGN3 311 aa5.65□□□□□ -1.5
SMG6-211ENST00000572369 OR10G9Q8NGN4 311 aa5.65□□□□□ -1.5
SMG6-211ENST00000572369 OR10G7Q8NGN6 311 aa5.65□□□□□ -1.5
SMG6-211ENST00000572369 C11orf45Q8TAV5 145 aa5.65□□□□□ -1.5
SMG6-211ENST00000572369 C11orf68Q9H3H3 251 aaKnown RBP5.65□□□□□ -1.5
SMG6-211ENST00000572369 TNFSF18Q9UNG2 199 aa5.65□□□□□ -1.5
SMG6-211ENST00000572369 RFNGQ9Y644 331 aa5.65□□□□□ -1.5
SMG6-211ENST00000572369 ZNF705EA8MWA4 302 aaPredicted RBP5.64□□□□□ -1.51
SMG6-211ENST00000572369 SMLR1H3BR10 107 aa5.64□□□□□ -1.51
SMG6-211ENST00000572369 INSP01308 110 aa5.64□□□□□ -1.51
SMG6-211ENST00000572369 HBE1P02100 147 aa5.64□□□□□ -1.51
SMG6-211ENST00000572369 MED14OSP0DP75 135 aa5.64□□□□□ -1.51
SMG6-211ENST00000572369 ATP6V0CP27449 155 aa5.64□□□□□ -1.51
SMG6-211ENST00000572369 TSPOP30536 169 aa5.64□□□□□ -1.51
SMG6-211ENST00000572369 RAB2AP61019 212 aa5.64□□□□□ -1.51
SMG6-211ENST00000572369 PDE6HQ13956 83 aa5.64□□□□□ -1.51
SMG6-211ENST00000572369 ICAM4Q14773 271 aa5.64□□□□□ -1.51
SMG6-211ENST00000572369 RNF141Q8WVD5 230 aa5.64□□□□□ -1.51
SMG6-211ENST00000572369 SAT2Q96F10 170 aaPredicted RBP5.64□□□□□ -1.51
SMG6-211ENST00000572369 PRELID1Q9Y255 219 aa5.64□□□□□ -1.51
SMG6-211ENST00000572369 X6R8D5 127 aa5.64□□□□□ -1.51
SMG6-211ENST00000572369 MUC4Q99102 2169 aa5.63□□□□□ -1.51
SMG6-211ENST00000572369 TRAV12-2A0A075B6T6 113 aa5.63□□□□□ -1.51
SMG6-211ENST00000572369 NUPR2A6NF83 97 aa5.63□□□□□ -1.51
SMG6-211ENST00000572369 SMIM9A6NGZ8 99 aa5.63□□□□□ -1.51
SMG6-211ENST00000572369 J3KRW8 73 aa5.63□□□□□ -1.51
SMG6-211ENST00000572369 HMGB3O15347 200 aaKnown RBP5.63□□□□□ -1.51
SMG6-211ENST00000572369 MBP02144 154 aa5.63□□□□□ -1.51
SMG6-211ENST00000572369 CDKN1BP46527 198 aa5.63□□□□□ -1.51
SMG6-211ENST00000572369 CSN1S1P47710 185 aa5.63□□□□□ -1.51
SMG6-211ENST00000572369 CDC34P49427 236 aaPredicted RBP5.63□□□□□ -1.51
SMG6-211ENST00000572369 EMP1P54849 157 aa5.63□□□□□ -1.51
SMG6-211ENST00000572369 NANOS2P60321 138 aaKnown RBP5.63□□□□□ -1.51
SMG6-211ENST00000572369 RANP62826 216 aaKnown RBP5.63□□□□□ -1.51
SMG6-211ENST00000572369 RRN3P1Q2M238 152 aa5.63□□□□□ -1.51
SMG6-211ENST00000572369 FAM74A1Q5RGS3 127 aa5.63□□□□□ -1.51
SMG6-211ENST00000572369 RPL7L1Q6DKI1 246 aaKnown RBP5.63□□□□□ -1.51
SMG6-211ENST00000572369 AMTNQ6UX39 209 aa5.63□□□□□ -1.51
SMG6-211ENST00000572369 BAP18Q8IXM2 172 aa5.63□□□□□ -1.51
SMG6-211ENST00000572369 EXOC3-AS1Q8N2X6 119 aa5.63□□□□□ -1.51
SMG6-211ENST00000572369 Q8NAQ8 132 aa5.63□□□□□ -1.51
SMG6-211ENST00000572369 OR2G3Q8NGZ4 309 aa5.63□□□□□ -1.51
SMG6-211ENST00000572369 GNPNAT1Q96EK6 184 aaPredicted RBP5.63□□□□□ -1.51
SMG6-211ENST00000572369 FAM167A-AS1Q96KT0 104 aa5.63□□□□□ -1.51
SMG6-211ENST00000572369 IGF2BP2-AS1Q96M15 143 aa5.63□□□□□ -1.51
SMG6-211ENST00000572369 PSMG3Q9BT73 122 aaPredicted RBP5.63□□□□□ -1.51
SMG6-211ENST00000572369 KLK5Q9Y337 293 aaPredicted RBP5.63□□□□□ -1.51
SMG6-211ENST00000572369 TMEM189A5PLL7 270 aa5.62□□□□□ -1.51
SMG6-211ENST00000572369 RNF222A6NCQ9 220 aa5.62□□□□□ -1.51
SMG6-211ENST00000572369 A8MTW9 85 aa5.62□□□□□ -1.51
SMG6-211ENST00000572369 PRAC2D3DTV9 90 aa5.62□□□□□ -1.51
SMG6-211ENST00000572369 M0R3E3 92 aa5.62□□□□□ -1.51
SMG6-211ENST00000572369 TAAR5O14804 337 aa5.62□□□□□ -1.51
SMG6-211ENST00000572369 EIF3GO75821 320 aaKnown RBP eCLIP5.62□□□□□ -1.51
SMG6-211ENST00000572369 NDUFB4O95168 129 aa5.62□□□□□ -1.51
SMG6-211ENST00000572369 RBMY1A1P0DJD3 496 aaKnown RBP5.62□□□□□ -1.51
SMG6-211ENST00000572369 RBMY1CP0DJD4 496 aa5.62□□□□□ -1.51
SMG6-211ENST00000572369 HTN1P15515 57 aa5.62□□□□□ -1.51
SMG6-211ENST00000572369 LEPP41159 167 aa5.62□□□□□ -1.51
SMG6-211ENST00000572369 SERF2P84101 59 aa5.62□□□□□ -1.51
SMG6-211ENST00000572369 RBMY1FQ15415 496 aaKnown RBP5.62□□□□□ -1.51
SMG6-211ENST00000572369 TMEM78Q5T7P6 136 aa5.62□□□□□ -1.51
SMG6-211ENST00000572369 ZNF705AQ6ZN79 300 aaPredicted RBP5.62□□□□□ -1.51
SMG6-211ENST00000572369 PQLC2Q6ZP29 291 aa5.62□□□□□ -1.51
SMG6-211ENST00000572369 IQCF2Q8IXL9 164 aa5.62□□□□□ -1.51
SMG6-211ENST00000572369 RPP25LQ8N5L8 163 aaKnown RBP5.62□□□□□ -1.51
SMG6-211ENST00000572369 PHLDA1Q8WV24 401 aaPredicted RBP5.62□□□□□ -1.51
SMG6-211ENST00000572369 FXYD5Q96DB9 178 aa5.62□□□□□ -1.51
SMG6-211ENST00000572369 MRPL53Q96EL3 112 aaKnown RBP5.62□□□□□ -1.51
SMG6-211ENST00000572369 PHYHIPLQ96FC7 376 aa5.62□□□□□ -1.51
SMG6-211ENST00000572369 HYLS1Q96M11 299 aa5.62□□□□□ -1.51
SMG6-211ENST00000572369 LINC01587Q99440 93 aa5.62□□□□□ -1.51
SMG6-211ENST00000572369 NEU1Q99519 415 aa5.62□□□□□ -1.51
SMG6-211ENST00000572369 SH3BGRL3Q9H299 93 aa5.62□□□□□ -1.51
SMG6-211ENST00000572369 RPH3ALQ9UNE2 315 aa5.62□□□□□ -1.51
SMG6-211ENST00000572369 LOC102723971A0A1B0GUV8 181 aa5.61□□□□□ -1.51
SMG6-211ENST00000572369 KANTRA0A1W2PQU2 76 aa5.61□□□□□ -1.51
SMG6-211ENST00000572369 ZNF705GA8MUZ8 300 aaPredicted RBP5.61□□□□□ -1.51
SMG6-211ENST00000572369 NPIPB6E9PJ23 425 aa5.61□□□□□ -1.51
SMG6-211ENST00000572369 PFDN1O60925 122 aa5.61□□□□□ -1.51
SMG6-211ENST00000572369 ERCC8Q13216 396 aa5.61□□□□□ -1.51
SMG6-211ENST00000572369 AKR1C8PQ5T2L2 129 aa5.61□□□□□ -1.51
SMG6-211ENST00000572369 CEMP1Q6PRD7 247 aaPredicted RBP5.61□□□□□ -1.51
SMG6-211ENST00000572369 C1orf158Q8N1D5 194 aa5.61□□□□□ -1.51
SMG6-211ENST00000572369 LYPD1Q8N2G4 141 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms