RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 ZNF331Q9NQX6 463 aaPredicted RBP8.52□□□□□ -1.05
CCDC40-208ENST00000572270 HSPB7Q9UBY9 170 aa8.52□□□□□ -1.05
CCDC40-208ENST00000572270 LINC00854A0A1B0GVQ3 168 aa8.51□□□□□ -1.05
CCDC40-208ENST00000572270 SFTA3P0C7M3 94 aa8.51□□□□□ -1.05
CCDC40-208ENST00000572270 CT45A10P0DMU9 189 aa8.51□□□□□ -1.05
CCDC40-208ENST00000572270 ANXA7P20073 488 aaKnown RBP8.51□□□□□ -1.05
CCDC40-208ENST00000572270 TIRAPP58753 221 aa8.51□□□□□ -1.05
CCDC40-208ENST00000572270 TMEM182Q6ZP80 229 aaPredicted RBP8.51□□□□□ -1.05
CCDC40-208ENST00000572270 IQCF2Q8IXL9 164 aa8.51□□□□□ -1.05
CCDC40-208ENST00000572270 Q8N976 141 aa8.51□□□□□ -1.05
CCDC40-208ENST00000572270 NHLRC2Q8NBF2 726 aa8.51□□□□□ -1.05
CCDC40-208ENST00000572270 HSD17B11Q8NBQ5 300 aa8.51□□□□□ -1.05
CCDC40-208ENST00000572270 LOC100506127A0A0U1RQW1 187 aa8.5□□□□□ -1.05
CCDC40-208ENST00000572270 PMS2P5A8MQ11 134 aa8.5□□□□□ -1.05
CCDC40-208ENST00000572270 PRAC2D3DTV9 90 aa8.5□□□□□ -1.05
CCDC40-208ENST00000572270 HYPMO75409 117 aa8.5□□□□□ -1.05
CCDC40-208ENST00000572270 OR5G3P0C626 314 aa8.5□□□□□ -1.05
CCDC40-208ENST00000572270 AKR1C1Q04828 323 aa8.5□□□□□ -1.05
CCDC40-208ENST00000572270 SNX29P2Q8IUI4 249 aa8.5□□□□□ -1.05
CCDC40-208ENST00000572270 BAALCQ8WXS3 180 aa8.5□□□□□ -1.05
CCDC40-208ENST00000572270 ARPC5LQ9BPX5 153 aa8.5□□□□□ -1.05
CCDC40-208ENST00000572270 NAA60Q9H7X0 242 aa8.5□□□□□ -1.05
CCDC40-208ENST00000572270 C14orf166Q9Y224 244 aaKnown RBP8.5□□□□□ -1.05
CCDC40-208ENST00000572270 RNF24Q9Y225 148 aa8.5□□□□□ -1.05
CCDC40-208ENST00000572270 TRAV8-3A0A0A6YYJ7 113 aa8.49□□□□□ -1.05
CCDC40-208ENST00000572270 MPDU1O75352 247 aa8.49□□□□□ -1.05
CCDC40-208ENST00000572270 CCR6P51684 374 aa8.49□□□□□ -1.05
CCDC40-208ENST00000572270 SMCO1Q147U7 214 aa8.49□□□□□ -1.05
CCDC40-208ENST00000572270 SCGB2B2Q4G0G5 96 aa8.49□□□□□ -1.05
CCDC40-208ENST00000572270 LELP1Q5T871 98 aa8.49□□□□□ -1.05
CCDC40-208ENST00000572270 CROCCP3Q8IVE0 287 aa8.49□□□□□ -1.05
CCDC40-208ENST00000572270 ATP6V0E2Q8NHE4 81 aa8.49□□□□□ -1.05
CCDC40-208ENST00000572270 ZNF479Q96JC4 524 aa8.49□□□□□ -1.05
CCDC40-208ENST00000572270 RPH3ALQ9UNE2 315 aa8.49□□□□□ -1.05
CCDC40-208ENST00000572270 COX11Q9Y6N1 276 aa8.49□□□□□ -1.05
CCDC40-208ENST00000572270 SMIM31A0A1B0GVY4 71 aa8.48□□□□□ -1.05
CCDC40-208ENST00000572270 RGS13O14921 159 aa8.48□□□□□ -1.05
CCDC40-208ENST00000572270 IL5P05113 134 aa8.48□□□□□ -1.05
CCDC40-208ENST00000572270 AKR1C4P17516 323 aa8.48□□□□□ -1.05
CCDC40-208ENST00000572270 AQP4P55087 323 aa8.48□□□□□ -1.05
CCDC40-208ENST00000572270 BTN1A1Q13410 526 aa8.48□□□□□ -1.05
CCDC40-208ENST00000572270 TERB2Q8NHR7 220 aa8.48□□□□□ -1.05
CCDC40-208ENST00000572270 MARCH1Q8TCQ1 289 aa8.48□□□□□ -1.05
CCDC40-208ENST00000572270 A0A0U1RQV1 116 aa8.47□□□□□ -1.05
CCDC40-208ENST00000572270 SNRPCP09234 159 aaKnown RBP8.47□□□□□ -1.05
CCDC40-208ENST00000572270 LINC00869P0C866 280 aa8.47□□□□□ -1.05
CCDC40-208ENST00000572270 TOR2AQ5JU69 321 aa8.47□□□□□ -1.05
CCDC40-208ENST00000572270 CYP2G1PQ6ZSU1 146 aa8.47□□□□□ -1.05
CCDC40-208ENST00000572270 ACOT7LQ6ZUV0 252 aa8.47□□□□□ -1.05
CCDC40-208ENST00000572270 OR10G4Q8NGN3 311 aa8.47□□□□□ -1.05
CCDC40-208ENST00000572270 TP53TG3Q9ULZ0 132 aa8.47□□□□□ -1.05
CCDC40-208ENST00000572270 PXMP4Q9Y6I8 212 aa8.47□□□□□ -1.05
CCDC40-208ENST00000572270 A0A0D9SG52 128 aa8.46□□□□□ -1.06
CCDC40-208ENST00000572270 LOC100131303A0A0U1RQF7 123 aa8.46□□□□□ -1.06
CCDC40-208ENST00000572270 CD3DP04234 171 aa8.46□□□□□ -1.06
CCDC40-208ENST00000572270 IAPPP10997 89 aa8.46□□□□□ -1.06
CCDC40-208ENST00000572270 RNASE4P34096 147 aaKnown RBP8.46□□□□□ -1.06
CCDC40-208ENST00000572270 RPP30P78346 268 aaKnown RBP8.46□□□□□ -1.06
CCDC40-208ENST00000572270 CD300CQ08708 224 aa8.46□□□□□ -1.06
CCDC40-208ENST00000572270 FFAR4Q5NUL3 377 aa8.46□□□□□ -1.06
CCDC40-208ENST00000572270 OR10P1Q8NGE3 313 aa8.46□□□□□ -1.06
CCDC40-208ENST00000572270 RNF222A6NCQ9 220 aa8.45□□□□□ -1.06
CCDC40-208ENST00000572270 KLLNB2CW77 178 aa8.45□□□□□ -1.06
CCDC40-208ENST00000572270 SLC17A3O00476 420 aa8.45□□□□□ -1.06
CCDC40-208ENST00000572270 MRPS12O15235 138 aaKnown RBP8.45□□□□□ -1.06
CCDC40-208ENST00000572270 TBPP20226 339 aa8.45□□□□□ -1.06
CCDC40-208ENST00000572270 PLP1P60201 277 aa8.45□□□□□ -1.06
CCDC40-208ENST00000572270 ODF1Q14990 250 aa8.45□□□□□ -1.06
CCDC40-208ENST00000572270 RMI2Q96E14 147 aa8.45□□□□□ -1.06
CCDC40-208ENST00000572270 IGHV1OR15-1A0A075B7D0 117 aa8.44□□□□□ -1.06
CCDC40-208ENST00000572270 SMCO3A2RU48 225 aa8.44□□□□□ -1.06
CCDC40-208ENST00000572270 H3BTX0 84 aa8.44□□□□□ -1.06
CCDC40-208ENST00000572270 GPX1P07203 203 aa8.44□□□□□ -1.06
CCDC40-208ENST00000572270 PFN1P07737 140 aaKnown RBP8.44□□□□□ -1.06
CCDC40-208ENST00000572270 FAM122CQ6P4D5 195 aa8.44□□□□□ -1.06
CCDC40-208ENST00000572270 BPIFA4PQ86YQ2 179 aa8.44□□□□□ -1.06
CCDC40-208ENST00000572270 RTBDNQ9BSG5 229 aaPredicted RBP8.44□□□□□ -1.06
CCDC40-208ENST00000572270 ARL6Q9H0F7 186 aa8.44□□□□□ -1.06
CCDC40-208ENST00000572270 FABP12A6NFH5 140 aa8.43□□□□□ -1.06
CCDC40-208ENST00000572270 GGTLC3B5MD39 225 aa8.43□□□□□ -1.06
CCDC40-208ENST00000572270 OR4E1P0C645 316 aa8.43□□□□□ -1.06
CCDC40-208ENST00000572270 GABARAPL2P60520 117 aa8.43□□□□□ -1.06
CCDC40-208ENST00000572270 SELENOTP62341 195 aa8.43□□□□□ -1.06
CCDC40-208ENST00000572270 OPCMLQ14982 345 aa8.43□□□□□ -1.06
CCDC40-208ENST00000572270 OR4D10Q8NGI6 311 aa8.43□□□□□ -1.06
CCDC40-208ENST00000572270 CNBD2Q96M20 576 aa8.43□□□□□ -1.06
CCDC40-208ENST00000572270 ARV1Q9H2C2 271 aa8.43□□□□□ -1.06
CCDC40-208ENST00000572270 TRAV8-1A0A0A6YYK1 113 aa8.42□□□□□ -1.06
CCDC40-208ENST00000572270 TRAV4A0A0B4J268 109 aa8.42□□□□□ -1.06
CCDC40-208ENST00000572270 A0A0B4J2A0 478 aa8.42□□□□□ -1.06
CCDC40-208ENST00000572270 PRSS46E5RG02 174 aa8.42□□□□□ -1.06
CCDC40-208ENST00000572270 OR4C5Q8NGB2 326 aa8.42□□□□□ -1.06
CCDC40-208ENST00000572270 LINC01600Q96MT4 127 aa8.42□□□□□ -1.06
CCDC40-208ENST00000572270 CIB3Q96Q77 187 aaPredicted RBP8.42□□□□□ -1.06
CCDC40-208ENST00000572270 PRR13Q9NZ81 148 aa8.42□□□□□ -1.06
CCDC40-208ENST00000572270 SHPKQ9UHJ6 478 aa8.42□□□□□ -1.06
CCDC40-208ENST00000572270 KCNIP3Q9Y2W7 256 aa8.42□□□□□ -1.06
CCDC40-208ENST00000572270 FAT4Q6V0I7 4981 aa8.42□□□□□ -1.06
CCDC40-208ENST00000572270 LPAP08519 4548 aa8.41□□□□□ -1.06
CCDC40-208ENST00000572270 MED6O75586 246 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms