RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 APC2O95996 2303 aa12.16□□□□□ -0.46
SMG6-207ENST00000570756 CCL11P51671 97 aa12.16□□□□□ -0.46
SMG6-207ENST00000570756 PHLDA1Q8WV24 401 aaPredicted RBP12.16□□□□□ -0.46
SMG6-207ENST00000570756 AAMDCQ9H7C9 122 aa12.16□□□□□ -0.46
SMG6-207ENST00000570756 VSTM5A8MXK1 200 aa12.15□□□□□ -0.46
SMG6-207ENST00000570756 S100A7AQ86SG5 101 aa12.15□□□□□ -0.46
SMG6-207ENST00000570756 CEND1Q8N111 149 aa12.15□□□□□ -0.46
SMG6-207ENST00000570756 ATP6V0BQ99437 205 aa12.15□□□□□ -0.46
SMG6-207ENST00000570756 SPANXB1Q9NS25 103 aaPredicted RBP12.15□□□□□ -0.46
SMG6-207ENST00000570756 NHP2Q9NX24 153 aaKnown RBP12.15□□□□□ -0.46
SMG6-207ENST00000570756 SIGLEC9Q9Y336 463 aa12.15□□□□□ -0.46
SMG6-207ENST00000570756 PPIAL4EA0A075B759 164 aa12.15□□□□□ -0.47
SMG6-207ENST00000570756 IGHV3-72A0A0B4J1Y9 119 aa12.15□□□□□ -0.47
SMG6-207ENST00000570756 K7ERJ3 54 aa12.15□□□□□ -0.47
SMG6-207ENST00000570756 NDUFB3O43676 98 aa12.15□□□□□ -0.47
SMG6-207ENST00000570756 SH2D1AO60880 128 aa12.15□□□□□ -0.47
SMG6-207ENST00000570756 IGKCP01834 107 aa12.15□□□□□ -0.47
SMG6-207ENST00000570756 PPIAL4FP0DN26 164 aa12.15□□□□□ -0.47
SMG6-207ENST00000570756 HLA-DRB4P13762 266 aa12.15□□□□□ -0.47
SMG6-207ENST00000570756 CCL8P80075 99 aa12.15□□□□□ -0.47
SMG6-207ENST00000570756 SRSF1Q07955 248 aaKnown RBP eCLIP12.15□□□□□ -0.47
SMG6-207ENST00000570756 ODF1Q14990 250 aa12.15□□□□□ -0.47
SMG6-207ENST00000570756 TWIST1Q15672 202 aa12.15□□□□□ -0.47
SMG6-207ENST00000570756 C18orf15Q96N68 181 aa12.15□□□□□ -0.47
SMG6-207ENST00000570756 HHLA3Q9XRX5 114 aa12.15□□□□□ -0.47
SMG6-207ENST00000570756 HLA-DRB4X5D2U9 266 aa12.15□□□□□ -0.47
SMG6-207ENST00000570756 ACACAQ13085 2346 aa12.14□□□□□ -0.47
SMG6-207ENST00000570756 TRBV25-1A0A075B6N4 114 aa12.14□□□□□ -0.47
SMG6-207ENST00000570756 IGKV2D-26A0A0A0MRZ7 120 aa12.14□□□□□ -0.47
SMG6-207ENST00000570756 TRAV17A0A0B4J275 112 aa12.14□□□□□ -0.47
SMG6-207ENST00000570756 MBD3L4A6NDZ8 208 aaPredicted RBP12.14□□□□□ -0.47
SMG6-207ENST00000570756 MBD3L3A6NE82 208 aaPredicted RBP12.14□□□□□ -0.47
SMG6-207ENST00000570756 MBD3L5A6NJ08 208 aaPredicted RBP12.14□□□□□ -0.47
SMG6-207ENST00000570756 E9PLD3 99 aa12.14□□□□□ -0.47
SMG6-207ENST00000570756 I3L2K1 104 aa12.14□□□□□ -0.47
SMG6-207ENST00000570756 IGKV1-17P01599 117 aa12.14□□□□□ -0.47
SMG6-207ENST00000570756 CRYGBP07316 175 aa12.14□□□□□ -0.47
SMG6-207ENST00000570756 EVI2AP22794 236 aa12.14□□□□□ -0.47
SMG6-207ENST00000570756 PDE6HQ13956 83 aa12.14□□□□□ -0.47
SMG6-207ENST00000570756 WFDC3Q8IUB2 231 aa12.14□□□□□ -0.47
SMG6-207ENST00000570756 SVIPQ8NHG7 77 aa12.14□□□□□ -0.47
SMG6-207ENST00000570756 MBD3L2Q8NHZ7 208 aaPredicted RBP12.14□□□□□ -0.47
SMG6-207ENST00000570756 SPATA25Q9BR10 227 aa12.14□□□□□ -0.47
SMG6-207ENST00000570756 ANKRD11Q6UB99 2663 aaPredicted RBP12.14□□□□□ -0.47
SMG6-207ENST00000570756 A0A1W2PRD5 423 aa12.13□□□□□ -0.47
SMG6-207ENST00000570756 A0A1W2PRF3 423 aa12.13□□□□□ -0.47
SMG6-207ENST00000570756 A0A1W2PRM7 423 aa12.13□□□□□ -0.47
SMG6-207ENST00000570756 LINC01546A6NGU7 62 aa12.13□□□□□ -0.47
SMG6-207ENST00000570756 TEX22C9J3V5 150 aa12.13□□□□□ -0.47
SMG6-207ENST00000570756 SMKR1H3BMG3 65 aa12.13□□□□□ -0.47
SMG6-207ENST00000570756 PLCE1Q9P212 2302 aa12.13□□□□□ -0.47
SMG6-207ENST00000570756 M0R3E3 92 aa12.13□□□□□ -0.47
SMG6-207ENST00000570756 CEACAM4O75871 244 aa12.13□□□□□ -0.47
SMG6-207ENST00000570756 PRSS1P07477 247 aa12.13□□□□□ -0.47
SMG6-207ENST00000570756 FCER1GP30273 86 aa12.13□□□□□ -0.47
SMG6-207ENST00000570756 ZNF474Q6S9Z5 364 aaPredicted RBP12.13□□□□□ -0.47
SMG6-207ENST00000570756 ZNF562Q6V9R5 426 aa12.13□□□□□ -0.47
SMG6-207ENST00000570756 PPP1R27Q86WC6 154 aa12.13□□□□□ -0.47
SMG6-207ENST00000570756 NXT2Q9NPJ8 142 aaKnown RBP12.13□□□□□ -0.47
SMG6-207ENST00000570756 LEPP41159 167 aa12.12□□□□□ -0.47
SMG6-207ENST00000570756 ATP5LO75964 103 aa12.12□□□□□ -0.47
SMG6-207ENST00000570756 DPM2O94777 84 aa12.12□□□□□ -0.47
SMG6-207ENST00000570756 TAL2Q16559 108 aa12.12□□□□□ -0.47
SMG6-207ENST00000570756 SEM1Q6ZVN7 128 aa12.12□□□□□ -0.47
SMG6-207ENST00000570756 RNF125Q96EQ8 232 aa12.12□□□□□ -0.47
SMG6-207ENST00000570756 ZNF479Q96JC4 524 aa12.12□□□□□ -0.47
SMG6-207ENST00000570756 IGLL5B9A064 214 aa12.11□□□□□ -0.47
SMG6-207ENST00000570756 CNTFRP26992 372 aa12.11□□□□□ -0.47
SMG6-207ENST00000570756 KLF17Q5JT82 389 aaPredicted RBP12.11□□□□□ -0.47
SMG6-207ENST00000570756 COX8CQ7Z4L0 72 aa12.11□□□□□ -0.47
SMG6-207ENST00000570756 FDCSPQ8NFU4 85 aa12.11□□□□□ -0.47
SMG6-207ENST00000570756 SPENQ96T58 3664 aaKnown RBP12.11□□□□□ -0.47
SMG6-207ENST00000570756 MRPS12O15235 138 aaKnown RBP12.11□□□□□ -0.47
SMG6-207ENST00000570756 FCN3O75636 299 aa12.11□□□□□ -0.47
SMG6-207ENST00000570756 WFDC2Q14508 124 aa12.11□□□□□ -0.47
SMG6-207ENST00000570756 SVILO95425 2214 aa12.11□□□□□ -0.47
SMG6-207ENST00000570756 IL4P05112 153 aa12.1□□□□□ -0.47
SMG6-207ENST00000570756 IGHV1-8P0DP01 117 aa12.1□□□□□ -0.47
SMG6-207ENST00000570756 ZNF491Q8N8L2 437 aa12.1□□□□□ -0.47
SMG6-207ENST00000570756 TTTY13Q9BZ97 58 aa12.1□□□□□ -0.47
SMG6-207ENST00000570756 ABCA1O95477 2261 aa12.1□□□□□ -0.47
SMG6-207ENST00000570756 CACNA1AO00555 2505 aa12.1□□□□□ -0.47
SMG6-207ENST00000570756 WT1P19544 449 aaPredicted RBP12.1□□□□□ -0.47
SMG6-207ENST00000570756 CD40P25942 277 aa12.1□□□□□ -0.47
SMG6-207ENST00000570756 DLX6P56179 175 aa12.1□□□□□ -0.47
SMG6-207ENST00000570756 ZC2HC1BQ5TFG8 222 aa12.1□□□□□ -0.47
SMG6-207ENST00000570756 NUP37Q8NFH4 326 aa12.1□□□□□ -0.47
SMG6-207ENST00000570756 SRSF8Q9BRL6 282 aaKnown RBP12.1□□□□□ -0.47
SMG6-207ENST00000570756 C17orf100A8MU93 164 aa12.09□□□□□ -0.47
SMG6-207ENST00000570756 FOXC1Q12948 553 aa12.09□□□□□ -0.47
SMG6-207ENST00000570756 TMEM155Q4W5P6 130 aa12.09□□□□□ -0.47
SMG6-207ENST00000570756 GTSCR1Q86UQ5 136 aa12.09□□□□□ -0.47
SMG6-207ENST00000570756 ZNF502Q8TBZ5 544 aa12.09□□□□□ -0.47
SMG6-207ENST00000570756 FOXC2Q99958 501 aa12.09□□□□□ -0.47
SMG6-207ENST00000570756 NPIPB5A8MRT5 1133 aa12.09□□□□□ -0.47
SMG6-207ENST00000570756 IGLC6P0CF74 106 aa12.09□□□□□ -0.47
SMG6-207ENST00000570756 PRB4P10163 310 aaPredicted RBP12.09□□□□□ -0.47
SMG6-207ENST00000570756 CCDC144NLQ6NUI1 221 aa12.09□□□□□ -0.47
SMG6-207ENST00000570756 TMEM178BH3BS89 294 aa12.08□□□□□ -0.48
SMG6-207ENST00000570756 EGR2P11161 476 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms