RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 HOXD3P31249 432 aaPredicted RBP8.32□□□□□ -1.08
PDXDC1-216ENST00000569715 SYNJ2BPP57105 145 aa8.32□□□□□ -1.08
PDXDC1-216ENST00000569715 PSG9Q00887 426 aa8.32□□□□□ -1.08
PDXDC1-216ENST00000569715 FAM106AQ4KMX7 169 aa8.32□□□□□ -1.08
PDXDC1-216ENST00000569715 Q86TA4 180 aa8.32□□□□□ -1.08
PDXDC1-216ENST00000569715 LINC01006Q8NI28 216 aa8.32□□□□□ -1.08
PDXDC1-216ENST00000569715 IGKV2-40A0A087WW87 121 aaPredicted RBP8.32□□□□□ -1.08
PDXDC1-216ENST00000569715 TRAV8-2A0A0B4J237 113 aa8.32□□□□□ -1.08
PDXDC1-216ENST00000569715 IGKV2D-40P01614 121 aaPredicted RBP8.32□□□□□ -1.08
PDXDC1-216ENST00000569715 C8orf86Q6ZUL3 223 aa8.32□□□□□ -1.08
PDXDC1-216ENST00000569715 FMC1Q96HJ9 113 aa8.32□□□□□ -1.08
PDXDC1-216ENST00000569715 RHPN1-AS1Q9BWJ2 59 aa8.32□□□□□ -1.08
PDXDC1-216ENST00000569715 TMEM213A2RRL7 107 aa8.31□□□□□ -1.08
PDXDC1-216ENST00000569715 RPS10P46783 165 aaKnown RBP8.31□□□□□ -1.08
PDXDC1-216ENST00000569715 ANAPC16Q96DE5 110 aa8.31□□□□□ -1.08
PDXDC1-216ENST00000569715 CXorf65A6NEN9 183 aa8.31□□□□□ -1.08
PDXDC1-216ENST00000569715 ZNF253O75346 499 aa8.31□□□□□ -1.08
PDXDC1-216ENST00000569715 GCGP01275 180 aa8.31□□□□□ -1.08
PDXDC1-216ENST00000569715 LTAP01374 205 aa8.31□□□□□ -1.08
PDXDC1-216ENST00000569715 SLURP1P55000 103 aa8.31□□□□□ -1.08
PDXDC1-216ENST00000569715 PRNTQ86SH4 94 aa8.31□□□□□ -1.08
PDXDC1-216ENST00000569715 CHEK1O14757 476 aa8.31□□□□□ -1.08
PDXDC1-216ENST00000569715 CDX1P47902 265 aaPredicted RBP8.31□□□□□ -1.08
PDXDC1-216ENST00000569715 OR10G8Q8NGN5 311 aa8.31□□□□□ -1.08
PDXDC1-216ENST00000569715 SMPXQ9UHP9 88 aa8.31□□□□□ -1.08
PDXDC1-216ENST00000569715 C2CD3Q4AC94 2353 aa8.3□□□□□ -1.08
PDXDC1-216ENST00000569715 IGKV3-7A0A075B6H7 116 aa8.3□□□□□ -1.08
PDXDC1-216ENST00000569715 PRAC2D3DTV9 90 aa8.3□□□□□ -1.08
PDXDC1-216ENST00000569715 CD28P10747 220 aa8.3□□□□□ -1.08
PDXDC1-216ENST00000569715 ERVFC1-1P60608 527 aa8.3□□□□□ -1.08
PDXDC1-216ENST00000569715 PRR27Q6MZM9 219 aa8.3□□□□□ -1.08
PDXDC1-216ENST00000569715 C1QL4Q86Z23 238 aa8.3□□□□□ -1.08
PDXDC1-216ENST00000569715 KLHL30-AS1Q8NEE0 82 aa8.3□□□□□ -1.08
PDXDC1-216ENST00000569715 NIPBLQ6KC79 2804 aaeCLIP8.3□□□□□ -1.08
PDXDC1-216ENST00000569715 PFN1P07737 140 aaKnown RBP8.3□□□□□ -1.08
PDXDC1-216ENST00000569715 FOSL1P15407 271 aa8.3□□□□□ -1.08
PDXDC1-216ENST00000569715 PDZD11Q5EBL8 140 aa8.3□□□□□ -1.08
PDXDC1-216ENST00000569715 C4orf3Q8WVX3 66 aa8.3□□□□□ -1.08
PDXDC1-216ENST00000569715 MLST8Q9BVC4 326 aa8.3□□□□□ -1.08
PDXDC1-216ENST00000569715 C16orf95Q9H693 158 aa8.3□□□□□ -1.08
PDXDC1-216ENST00000569715 CYSRT1A8MQ03 144 aa8.3□□□□□ -1.08
PDXDC1-216ENST00000569715 HAX1O00165 279 aa8.3□□□□□ -1.08
PDXDC1-216ENST00000569715 LINC00322Q6ZN03 302 aaPredicted RBP8.3□□□□□ -1.08
PDXDC1-216ENST00000569715 TMEM75Q8N9X5 138 aa8.3□□□□□ -1.08
PDXDC1-216ENST00000569715 V9GYV3 84 aa8.3□□□□□ -1.08
PDXDC1-216ENST00000569715 A0A1W2PRX2 142 aa8.29□□□□□ -1.08
PDXDC1-216ENST00000569715 K7EMT4 169 aa8.29□□□□□ -1.08
PDXDC1-216ENST00000569715 RAB5AP20339 215 aa8.29□□□□□ -1.08
PDXDC1-216ENST00000569715 FAM3BP58499 235 aaPredicted RBP8.29□□□□□ -1.08
PDXDC1-216ENST00000569715 PSG3Q16557 428 aa8.29□□□□□ -1.08
PDXDC1-216ENST00000569715 OR11H1Q8NG94 326 aa8.29□□□□□ -1.08
PDXDC1-216ENST00000569715 UFC1Q9Y3C8 167 aa8.29□□□□□ -1.08
PDXDC1-216ENST00000569715 WNK1Q9H4A3 2382 aa8.29□□□□□ -1.08
PDXDC1-216ENST00000569715 A0A1W2PS18 150 aa8.29□□□□□ -1.08
PDXDC1-216ENST00000569715 RPL11P62913 178 aaKnown RBP8.29□□□□□ -1.08
PDXDC1-216ENST00000569715 FABP9Q0Z7S8 132 aa8.29□□□□□ -1.08
PDXDC1-216ENST00000569715 LCN12Q6JVE5 192 aa8.29□□□□□ -1.08
PDXDC1-216ENST00000569715 GRAMD2BQ96HH9 432 aa8.29□□□□□ -1.08
PDXDC1-216ENST00000569715 C20orf173Q96LM9 149 aa8.29□□□□□ -1.08
PDXDC1-216ENST00000569715 VGLL1Q99990 258 aa8.29□□□□□ -1.08
PDXDC1-216ENST00000569715 SLC50A1Q9BRV3 221 aa8.29□□□□□ -1.08
PDXDC1-216ENST00000569715 A8MWP6 167 aa8.28□□□□□ -1.08
PDXDC1-216ENST00000569715 CSN1S1P47710 185 aa8.28□□□□□ -1.08
PDXDC1-216ENST00000569715 REC114Q7Z4M0 266 aa8.28□□□□□ -1.08
PDXDC1-216ENST00000569715 Q8TAT8 98 aa8.28□□□□□ -1.08
PDXDC1-216ENST00000569715 PSG8Q9UQ74 426 aa8.28□□□□□ -1.08
PDXDC1-216ENST00000569715 SOCS3O14543 225 aa8.28□□□□□ -1.08
PDXDC1-216ENST00000569715 CA1P00915 261 aaPredicted RBP8.28□□□□□ -1.08
PDXDC1-216ENST00000569715 DEFA6Q01524 100 aa8.28□□□□□ -1.08
PDXDC1-216ENST00000569715 IBA57Q5T440 356 aaKnown RBP8.28□□□□□ -1.08
PDXDC1-216ENST00000569715 A0A1W2PPQ1 181 aa8.28□□□□□ -1.08
PDXDC1-216ENST00000569715 PPP1R2P9O14990 202 aa8.28□□□□□ -1.08
PDXDC1-216ENST00000569715 KLF5Q13887 457 aaPredicted RBP8.28□□□□□ -1.08
PDXDC1-216ENST00000569715 CITED2Q99967 270 aaPredicted RBP8.28□□□□□ -1.08
PDXDC1-216ENST00000569715 LINC01619G3V211 115 aa8.27□□□□□ -1.08
PDXDC1-216ENST00000569715 ERCC8Q13216 396 aa8.27□□□□□ -1.08
PDXDC1-216ENST00000569715 C16orf92Q96LL3 132 aa8.27□□□□□ -1.08
PDXDC1-216ENST00000569715 C8orf49Q96NF6 230 aa8.27□□□□□ -1.08
PDXDC1-216ENST00000569715 K7EQM0 130 aa8.27□□□□□ -1.09
PDXDC1-216ENST00000569715 LGALS9O00182 355 aa8.27□□□□□ -1.09
PDXDC1-216ENST00000569715 NDUFA6P56556 154 aa8.27□□□□□ -1.09
PDXDC1-216ENST00000569715 DEFB1P60022 68 aa8.27□□□□□ -1.09
PDXDC1-216ENST00000569715 ADAMTSL5Q6ZMM2 481 aa8.27□□□□□ -1.09
PDXDC1-216ENST00000569715 TCF24Q7RTU0 167 aa8.27□□□□□ -1.09
PDXDC1-216ENST00000569715 TMEM183AQ8IXX5 376 aa8.27□□□□□ -1.09
PDXDC1-216ENST00000569715 GBGT1Q8N5D6 347 aa8.27□□□□□ -1.09
PDXDC1-216ENST00000569715 OR1N2Q8NGR9 330 aa8.27□□□□□ -1.09
PDXDC1-216ENST00000569715 ZC2HC1AQ96GY0 325 aa8.27□□□□□ -1.09
PDXDC1-216ENST00000569715 NRN1Q9NPD7 142 aa8.27□□□□□ -1.09
PDXDC1-216ENST00000569715 OSTCQ9NRP0 149 aa8.27□□□□□ -1.09
PDXDC1-216ENST00000569715 NUDT10Q8NFP7 164 aa8.27□□□□□ -1.09
PDXDC1-216ENST00000569715 NUDT11Q96G61 164 aa8.27□□□□□ -1.09
PDXDC1-216ENST00000569715 JMJD8Q96S16 334 aa8.27□□□□□ -1.09
PDXDC1-216ENST00000569715 TRBV6-1A0A0K0K1D8 114 aa8.26□□□□□ -1.09
PDXDC1-216ENST00000569715 C2orf70A6NJV1 201 aa8.26□□□□□ -1.09
PDXDC1-216ENST00000569715 FAM210BQ96KR6 192 aa8.26□□□□□ -1.09
PDXDC1-216ENST00000569715 GPR61Q9BZJ8 451 aa8.26□□□□□ -1.09
PDXDC1-216ENST00000569715 RNF114Q9Y508 228 aa8.26□□□□□ -1.09
PDXDC1-216ENST00000569715 TEP1Q99973 2627 aaKnown RBP8.26□□□□□ -1.09
PDXDC1-216ENST00000569715 TCF21O43680 179 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms