RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	PSMG3	Q9BT73	122 aa	Predicted RBP	0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	PDCD10	Q9BUL8	212 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	SHANK3	Q9BYB0	1731 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	BCL2L10	Q9HD36	194 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	XAGE1A	Q9HD64	81 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	TXNL4B	Q9NX01	149 aa	Known RBP	0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	LSM2	Q9Y333	95 aa	Known RBP	0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	TENM3	Q9P273	2699 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	MRC2	Q9UBG0	1479 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	DLC1	Q96QB1	1528 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	MALRD1	Q5VYJ5	2156 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	OBSL1	O75147	1896 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	FRMPD1	Q5SYB0	1578 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	MYH7	P12883	1935 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	GREB1	Q4ZG55	1949 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	RGS12	O14924	1447 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	TRGV10	A0A0A0MS01	117 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	TRGV5	A0A0B4J1U4	118 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243		A0A0J9YX75	114 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243		A0A1B0GU33	70 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	C7orf71	A4D174	169 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	MEIS3P1	A6NDR6	274 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	BBIP1	A8MTZ0	92 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243		H3BPC8	53 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243		H7C2G1	150 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	CCL25	O15444	150 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	GNRH2	O43555	120 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	PITX3	O75364	302 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	ZNF737	O75373	536 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	IGLV1-51	P01701	117 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	CD3D	P04234	171 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	IFNA4	P05014	189 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	S100A8	P05109	93 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	CTSD	P07339	412 aa	Predicted RBP	0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	SLC25A4	P12235	298 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	HLA-DRB4	P13762	266 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	GNG2	P59768	71 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	PCBD1	P61457	104 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	PPP3R1	P63098	170 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	MRPS10	P82664	201 aa	Known RBP	0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	QRFP	P83859	136 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	PLGLB1	Q02325	96 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	CATR1	Q13166	79 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	NNAT	Q16517	81 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	MIC13	Q5XKP0	118 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	IZUMO2	Q6UXV1	221 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	TMEM91	Q6ZNR0	172 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243		Q6ZQT0	140 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	SLC35E3	Q7Z769	313 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	RPS19BP1	Q86WX3	136 aa	Known RBP	0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	MMGT1	Q8N4V1	131 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	FAM216B	Q8N7L0	139 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	OR5D16	Q8NGK9	328 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	PP6455	Q8WZ26	134 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	POP5	Q969H6	163 aa	Known RBP	0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	DIRC1	Q969H9	104 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	MAGOHB	Q96A72	148 aa	Known RBP	0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	MRPS24	Q96EL2	167 aa	Known RBP	0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	PPP3R2	Q96LZ3	170 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	OR4C12	Q96R67	309 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	HIGD2A	Q9BW72	106 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	ZNF471	Q9BX82	626 aa	Predicted RBP	0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	SEC11C	Q9BY50	192 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	BOK	Q9UMX3	212 aa	Predicted RBP	0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	TIMM9	Q9Y5J7	89 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	DNAJC15	Q9Y5T4	150 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	HSPE1-MOB4	S4R3N1	261 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	HLA-DRB4	X5D2U9	266 aa		0.84	□□□□□ -2.27
UBR1-209	ENST00000569243	ZFC3H1	O60293	1989 aa	Known RBP	0.84	□□□□□ -2.28
UBR1-209	ENST00000569243	GRIN2A	Q12879	1464 aa		0.84	□□□□□ -2.28
UBR1-209	ENST00000569243	ARHGEF11	O15085	1522 aa		0.84	□□□□□ -2.28
UBR1-209	ENST00000569243	FAM135A	Q9P2D6	1515 aa		0.84	□□□□□ -2.28
UBR1-209	ENST00000569243	ARHGEF28	Q8N1W1	1705 aa	Known RBP	0.84	□□□□□ -2.28
UBR1-209	ENST00000569243	EIF4G3	O43432	1585 aa	Known RBP	0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	MYOM3	Q5VTT5	1437 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	NUP98	P52948	1817 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	FANCM	Q8IYD8	2048 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	IGHV1-18	A0A0C4DH31	117 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	LOC107984156	A0A0G2JMH3	177 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	TRBV10-2	A0A0K0K1G8	114 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	TMEM218	A2RU14	115 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	TMEM235	A6NFC5	223 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	FNDC10	F2Z333	226 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	C5orf67	F2Z3F1	127 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	SDCBP	O00560	298 aa	Predicted RBP	0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	UQCRQ	O14949	82 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	APOD	P05090	189 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	ZNF705B	P0CI00	300 aa	Predicted RBP	0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	TPT1	P13693	172 aa	Known RBP	0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	FABP4	P15090	132 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	CD24	P25063	80 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	PEBP1	P30086	187 aa	Known RBP	0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	ZNF93	P35789	620 aa	Predicted RBP	0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	GNG4	P50150	75 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	S100A10	P60903	97 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	BLCAP	P62952	87 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	CIRBP	Q14011	172 aa	Known RBP	0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	ESRG	Q1W209	222 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	DEFB113	Q30KQ7	82 aa		0.83	□□□□□ -2.28

Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms