RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 KIR3DS1Q14943 382 aa10.44□□□□□ -0.74
RNF40-209ENST00000566703 GFI1BQ5VTD9 330 aa10.44□□□□□ -0.74
RNF40-209ENST00000566703 MORN5Q5VZ52 161 aa10.44□□□□□ -0.74
RNF40-209ENST00000566703 NRARPQ7Z6K4 114 aa10.44□□□□□ -0.74
RNF40-209ENST00000566703 CHAC2Q8WUX2 184 aa10.44□□□□□ -0.74
RNF40-209ENST00000566703 PFDN5Q99471 154 aa10.44□□□□□ -0.74
RNF40-209ENST00000566703 PYGO2Q9BRQ0 406 aa10.44□□□□□ -0.74
RNF40-209ENST00000566703 C20orf85Q9H1P6 137 aa10.44□□□□□ -0.74
RNF40-209ENST00000566703 C16orf90A8MZG2 172 aa10.43□□□□□ -0.74
RNF40-209ENST00000566703 SNURFLB1AK76 121 aa10.43□□□□□ -0.74
RNF40-209ENST00000566703 SLC17A3O00476 420 aa10.43□□□□□ -0.74
RNF40-209ENST00000566703 CDK2AP2O75956 126 aa10.43□□□□□ -0.74
RNF40-209ENST00000566703 RLN2P04090 185 aa10.43□□□□□ -0.74
RNF40-209ENST00000566703 SNRPCP09234 159 aaKnown RBP10.43□□□□□ -0.74
RNF40-209ENST00000566703 CT45A10P0DMU9 189 aa10.43□□□□□ -0.74
RNF40-209ENST00000566703 BTF3P20290 206 aaKnown RBP10.43□□□□□ -0.74
RNF40-209ENST00000566703 RPL29P47914 159 aaKnown RBP10.43□□□□□ -0.74
RNF40-209ENST00000566703 BCAP31P51572 246 aa10.43□□□□□ -0.74
RNF40-209ENST00000566703 DAZ2Q13117 558 aaKnown RBP10.43□□□□□ -0.74
RNF40-209ENST00000566703 OR5I1Q13606 314 aa10.43□□□□□ -0.74
RNF40-209ENST00000566703 TTC32Q5I0X7 151 aa10.43□□□□□ -0.74
RNF40-209ENST00000566703 MRPL53Q96EL3 112 aaKnown RBP10.43□□□□□ -0.74
RNF40-209ENST00000566703 C11orf1Q9H5F2 150 aa10.43□□□□□ -0.74
RNF40-209ENST00000566703 UQCC1Q9NVA1 299 aa10.43□□□□□ -0.74
RNF40-209ENST00000566703 WDR83OSQ9Y284 106 aa10.43□□□□□ -0.74
RNF40-209ENST00000566703 DNAH11Q96DT5 4516 aa10.42□□□□□ -0.74
RNF40-209ENST00000566703 PCLOQ9Y6V0 5065 aa10.42□□□□□ -0.74
RNF40-209ENST00000566703 TRAV26-1A0A087WT03 109 aa10.42□□□□□ -0.74
RNF40-209ENST00000566703 NPIPB6E9PJ23 425 aa10.42□□□□□ -0.74
RNF40-209ENST00000566703 PLA2G10O15496 165 aa10.42□□□□□ -0.74
RNF40-209ENST00000566703 PRB4P10163 310 aaPredicted RBP10.42□□□□□ -0.74
RNF40-209ENST00000566703 PVALBP20472 110 aaPredicted RBP10.42□□□□□ -0.74
RNF40-209ENST00000566703 S100A11P31949 105 aa10.42□□□□□ -0.74
RNF40-209ENST00000566703 CAV2P51636 162 aa10.42□□□□□ -0.74
RNF40-209ENST00000566703 VWC2Q2TAL6 325 aa10.42□□□□□ -0.74
RNF40-209ENST00000566703 MIC13Q5XKP0 118 aa10.42□□□□□ -0.74
RNF40-209ENST00000566703 ZNF431Q8TF32 576 aaPredicted RBP10.42□□□□□ -0.74
RNF40-209ENST00000566703 C2orf50Q96LR7 162 aa10.42□□□□□ -0.74
RNF40-209ENST00000566703 UPK3BQ9BT76 320 aa10.42□□□□□ -0.74
RNF40-209ENST00000566703 PARD6GQ9BYG4 376 aaPredicted RBP10.42□□□□□ -0.74
RNF40-209ENST00000566703 PRELID1Q9Y255 219 aa10.42□□□□□ -0.74
RNF40-209ENST00000566703 LSM5Q9Y4Y9 91 aaKnown RBP10.42□□□□□ -0.74
RNF40-209ENST00000566703 DYNC1H1Q14204 4646 aaKnown RBP10.42□□□□□ -0.74
RNF40-209ENST00000566703 A0A1W2PPQ1 181 aa10.41□□□□□ -0.74
RNF40-209ENST00000566703 GAGE12BA1L429 117 aa10.41□□□□□ -0.74
RNF40-209ENST00000566703 C5orf51A6NDU8 294 aa10.41□□□□□ -0.74
RNF40-209ENST00000566703 FAM24AA6NFZ4 105 aa10.41□□□□□ -0.74
RNF40-209ENST00000566703 H3BTX0 84 aa10.41□□□□□ -0.74
RNF40-209ENST00000566703 CCSO14618 274 aa10.41□□□□□ -0.74
RNF40-209ENST00000566703 LYRM1O43325 122 aa10.41□□□□□ -0.74
RNF40-209ENST00000566703 GAGE7O76087 117 aa10.41□□□□□ -0.74
RNF40-209ENST00000566703 CST7O76096 145 aa10.41□□□□□ -0.74
RNF40-209ENST00000566703 TCRBP04435 133 aa10.41□□□□□ -0.74
RNF40-209ENST00000566703 SLC25A5P05141 298 aaKnown RBP10.41□□□□□ -0.74
RNF40-209ENST00000566703 GAGE12FP0CL80 117 aa10.41□□□□□ -0.74
RNF40-209ENST00000566703 GAGE12GP0CL81 117 aa10.41□□□□□ -0.74
RNF40-209ENST00000566703 GAGE12IP0CL82 117 aa10.41□□□□□ -0.74
RNF40-209ENST00000566703 LINC00477Q96M19 166 aa10.41□□□□□ -0.74
RNF40-209ENST00000566703 C18orf15Q96N68 181 aa10.41□□□□□ -0.74
RNF40-209ENST00000566703 ZNF586Q9NXT0 402 aa10.41□□□□□ -0.74
RNF40-209ENST00000566703 TRAV5A0A0B4J249 113 aa10.4□□□□□ -0.74
RNF40-209ENST00000566703 TRAV12-3A0A0B4J271 114 aa10.4□□□□□ -0.74
RNF40-209ENST00000566703 FAM25EA8MYX2 175 aa10.4□□□□□ -0.74
RNF40-209ENST00000566703 ATP6V1FQ16864 119 aa10.4□□□□□ -0.74
RNF40-209ENST00000566703 ESRGQ1W209 222 aa10.4□□□□□ -0.74
RNF40-209ENST00000566703 LINC00467Q9BRT7 94 aa10.4□□□□□ -0.74
RNF40-209ENST00000566703 SLC39A9Q9NUM3 307 aa10.4□□□□□ -0.74
RNF40-209ENST00000566703 TMEM14CQ9P0S9 112 aa10.4□□□□□ -0.74
RNF40-209ENST00000566703 TRBV19A0A075B6N1 114 aa10.39□□□□□ -0.75
RNF40-209ENST00000566703 HIST1H1EP10412 219 aaKnown RBP10.39□□□□□ -0.75
RNF40-209ENST00000566703 HOXA5P20719 270 aa10.39□□□□□ -0.75
RNF40-209ENST00000566703 SULT1A1P50225 295 aa10.39□□□□□ -0.75
RNF40-209ENST00000566703 HBG1P69891 147 aa10.39□□□□□ -0.75
RNF40-209ENST00000566703 HBG2P69892 147 aa10.39□□□□□ -0.75
RNF40-209ENST00000566703 IL15RAQ13261 267 aa10.39□□□□□ -0.75
RNF40-209ENST00000566703 PDE6HQ13956 83 aa10.39□□□□□ -0.75
RNF40-209ENST00000566703 TMEM252Q8N6L7 170 aa10.39□□□□□ -0.75
RNF40-209ENST00000566703 ZNF680Q8NEM1 530 aa10.39□□□□□ -0.75
RNF40-209ENST00000566703 Q9H3A6 140 aa10.39□□□□□ -0.75
RNF40-209ENST00000566703 LYRM2Q9NU23 88 aaPredicted RBP10.39□□□□□ -0.75
RNF40-209ENST00000566703 MRPS16Q9Y3D3 137 aaKnown RBP10.39□□□□□ -0.75
RNF40-209ENST00000566703 PKHD1P08F94 4074 aa10.39□□□□□ -0.75
RNF40-209ENST00000566703 A0A0J9YY99 117 aa10.38□□□□□ -0.75
RNF40-209ENST00000566703 MPDU1O75352 247 aa10.38□□□□□ -0.75
RNF40-209ENST00000566703 NMBP08949 121 aa10.38□□□□□ -0.75
RNF40-209ENST00000566703 ANXA2RQ3ZCQ2 193 aa10.38□□□□□ -0.75
RNF40-209ENST00000566703 KRTAP4-5Q9BYR2 181 aa10.38□□□□□ -0.75
RNF40-209ENST00000566703 PKD1P98161 4303 aa10.37□□□□□ -0.75
RNF40-209ENST00000566703 TRAV6A0A075B6T7 132 aa10.37□□□□□ -0.75
RNF40-209ENST00000566703 C7orf71A4D174 169 aa10.37□□□□□ -0.75
RNF40-209ENST00000566703 KLLNB2CW77 178 aa10.37□□□□□ -0.75
RNF40-209ENST00000566703 J3KRW8 73 aa10.37□□□□□ -0.75
RNF40-209ENST00000566703 ZNF324O75467 553 aaPredicted RBP10.37□□□□□ -0.75
RNF40-209ENST00000566703 BAXQ07812 192 aa10.37□□□□□ -0.75
RNF40-209ENST00000566703 STX12Q86Y82 276 aa10.37□□□□□ -0.75
RNF40-209ENST00000566703 FAM19A4Q96LR4 140 aa10.37□□□□□ -0.75
RNF40-209ENST00000566703 SEC22CQ9BRL7 303 aa10.37□□□□□ -0.75
RNF40-209ENST00000566703 AGPAT4-IT1Q9H0P7 198 aa10.37□□□□□ -0.75
RNF40-209ENST00000566703 TIMM9Q9Y5J7 89 aa10.37□□□□□ -0.75
RNF40-209ENST00000566703 M0R3E3 92 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms