RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 H3BUX3 64 aa9.19□□□□□ -0.94
CDH1-210ENST00000566612 IGKV1-17P01599 117 aa9.19□□□□□ -0.94
CDH1-210ENST00000566612 IGLV1-47P01700 117 aa9.19□□□□□ -0.94
CDH1-210ENST00000566612 PAX8Q06710 450 aa9.19□□□□□ -0.94
CDH1-210ENST00000566612 TDRG1Q3Y452 100 aa9.19□□□□□ -0.94
CDH1-210ENST00000566612 RASL11AQ6T310 242 aa9.19□□□□□ -0.94
CDH1-210ENST00000566612 ZNF491Q8N8L2 437 aa9.19□□□□□ -0.94
CDH1-210ENST00000566612 OOSP1A8MZH6 123 aa9.18□□□□□ -0.94
CDH1-210ENST00000566612 C12orf54Q6X4T0 127 aa9.18□□□□□ -0.94
CDH1-210ENST00000566612 TMEM213A2RRL7 107 aa9.18□□□□□ -0.94
CDH1-210ENST00000566612 FAM120AOSQ5T036 256 aa9.18□□□□□ -0.94
CDH1-210ENST00000566612 DMRTA1Q5VZB9 504 aa9.18□□□□□ -0.94
CDH1-210ENST00000566612 C8orf31Q8N9H6 132 aa9.18□□□□□ -0.94
CDH1-210ENST00000566612 SNHG12Q9BXW3 62 aa9.18□□□□□ -0.94
CDH1-210ENST00000566612 TMEM160Q9NX00 188 aa9.18□□□□□ -0.94
CDH1-210ENST00000566612 SORL1Q92673 2214 aa9.18□□□□□ -0.94
CDH1-210ENST00000566612 C2CD3Q4AC94 2353 aa9.18□□□□□ -0.94
CDH1-210ENST00000566612 RNASE4P34096 147 aaKnown RBP9.17□□□□□ -0.94
CDH1-210ENST00000566612 FAM231DQ6ZW35 169 aa9.17□□□□□ -0.94
CDH1-210ENST00000566612 ALKBH7Q9BT30 221 aaPredicted RBP9.17□□□□□ -0.94
CDH1-210ENST00000566612 DSPP15924 2871 aaKnown RBP9.17□□□□□ -0.94
CDH1-210ENST00000566612 A0A1B0GW15 77 aa9.17□□□□□ -0.94
CDH1-210ENST00000566612 ADORA2A-AS1P86434 159 aa9.17□□□□□ -0.94
CDH1-210ENST00000566612 SCGB1D4Q6XE38 83 aa9.17□□□□□ -0.94
CDH1-210ENST00000566612 DEFB104AQ8WTQ1 72 aa9.17□□□□□ -0.94
CDH1-210ENST00000566612 ZC2HC1AQ96GY0 325 aa9.17□□□□□ -0.94
CDH1-210ENST00000566612 MRPL27Q9P0M9 148 aaKnown RBP9.17□□□□□ -0.94
CDH1-210ENST00000566612 GCSHP23434 173 aa9.17□□□□□ -0.94
CDH1-210ENST00000566612 HLA-DMBP28068 263 aa9.17□□□□□ -0.94
CDH1-210ENST00000566612 CACNG7P62955 275 aa9.17□□□□□ -0.94
CDH1-210ENST00000566612 SLC50A1Q9BRV3 221 aa9.16□□□□□ -0.94
CDH1-210ENST00000566612 K7EIM0 57 aa9.16□□□□□ -0.94
CDH1-210ENST00000566612 UBE2E1P51965 193 aa9.16□□□□□ -0.94
CDH1-210ENST00000566612 DNLZQ5SXM8 178 aa9.16□□□□□ -0.94
CDH1-210ENST00000566612 EBLN2Q6P2I7 272 aa9.16□□□□□ -0.94
CDH1-210ENST00000566612 LYPD1Q8N2G4 141 aa9.16□□□□□ -0.94
CDH1-210ENST00000566612 ZNF502Q8TBZ5 544 aa9.16□□□□□ -0.94
CDH1-210ENST00000566612 CHCHD1Q96BP2 118 aaKnown RBP9.16□□□□□ -0.94
CDH1-210ENST00000566612 SRSF8Q9BRL6 282 aaKnown RBP9.16□□□□□ -0.94
CDH1-210ENST00000566612 WDFY3Q8IZQ1 3526 aa9.16□□□□□ -0.94
CDH1-210ENST00000566612 MAPK1IP1LQ8NDC0 245 aa9.16□□□□□ -0.94
CDH1-210ENST00000566612 LINC00574Q9H8X3 128 aa9.16□□□□□ -0.94
CDH1-210ENST00000566612 MOB4Q9Y3A3 225 aa9.16□□□□□ -0.94
CDH1-210ENST00000566612 IGKV1D-37A0A075B6S9 117 aa9.16□□□□□ -0.94
CDH1-210ENST00000566612 FBLL1A6NHQ2 334 aaKnown RBP9.16□□□□□ -0.94
CDH1-210ENST00000566612 IFI27P40305 119 aaPredicted RBP9.16□□□□□ -0.94
CDH1-210ENST00000566612 LEPP41159 167 aa9.16□□□□□ -0.94
CDH1-210ENST00000566612 NUTF2P61970 127 aaKnown RBP9.16□□□□□ -0.94
CDH1-210ENST00000566612 FAM159AQ6UWV7 190 aa9.16□□□□□ -0.94
CDH1-210ENST00000566612 Q8N7P7 452 aa9.16□□□□□ -0.94
CDH1-210ENST00000566612 TRAV8-6A0A0B4J262 113 aa9.15□□□□□ -0.94
CDH1-210ENST00000566612 H3BVH4 76 aa9.15□□□□□ -0.94
CDH1-210ENST00000566612 I3L2K1 104 aa9.15□□□□□ -0.94
CDH1-210ENST00000566612 FOSL1P15407 271 aa9.15□□□□□ -0.94
CDH1-210ENST00000566612 SIGLEC15Q6ZMC9 328 aa9.15□□□□□ -0.94
CDH1-210ENST00000566612 FOXC2Q99958 501 aa9.15□□□□□ -0.94
CDH1-210ENST00000566612 A0A0G2JLM5 398 aa9.15□□□□□ -0.94
CDH1-210ENST00000566612 A6NDN8 102 aa9.15□□□□□ -0.94
CDH1-210ENST00000566612 TEX22C9J3V5 150 aa9.15□□□□□ -0.94
CDH1-210ENST00000566612 H3BRN7 92 aa9.15□□□□□ -0.94
CDH1-210ENST00000566612 GP9P14770 177 aa9.15□□□□□ -0.94
CDH1-210ENST00000566612 ABCA2Q9BZC7 2435 aa9.15□□□□□ -0.95
CDH1-210ENST00000566612 SYS1-DBNDD2H3BUS1 97 aa9.15□□□□□ -0.95
CDH1-210ENST00000566612 MAJINQ3KP22 176 aa9.15□□□□□ -0.95
CDH1-210ENST00000566612 TMEM75Q8N9X5 138 aa9.15□□□□□ -0.95
CDH1-210ENST00000566612 DUX5Q96PT3 197 aa9.15□□□□□ -0.95
CDH1-210ENST00000566612 C2orf88Q9BSF0 95 aa9.15□□□□□ -0.95
CDH1-210ENST00000566612 IGF2BP2-AS1Q96M15 143 aa9.14□□□□□ -0.95
CDH1-210ENST00000566612 ZNF492Q9P255 531 aa9.14□□□□□ -0.95
CDH1-210ENST00000566612 IGHV2-70DA0A0C4DH43 119 aa9.14□□□□□ -0.95
CDH1-210ENST00000566612 C1orf159Q96HA4 380 aa9.14□□□□□ -0.95
CDH1-210ENST00000566612 VGLL1Q99990 258 aa9.14□□□□□ -0.95
CDH1-210ENST00000566612 HBDP02042 147 aa9.14□□□□□ -0.95
CDH1-210ENST00000566612 LCNL1Q6ZST4 164 aa9.14□□□□□ -0.95
CDH1-210ENST00000566612 NPFFR1Q9GZQ6 430 aa9.14□□□□□ -0.95
CDH1-210ENST00000566612 LRRK2Q5S007 2527 aa9.14□□□□□ -0.95
CDH1-210ENST00000566612 ASIPP42127 132 aa9.13□□□□□ -0.95
CDH1-210ENST00000566612 DYNLRB2Q8TF09 96 aa9.13□□□□□ -0.95
CDH1-210ENST00000566612 ZFP36P26651 326 aaKnown RBP9.13□□□□□ -0.95
CDH1-210ENST00000566612 SRSF9Q13242 221 aaKnown RBP eCLIP9.13□□□□□ -0.95
CDH1-210ENST00000566612 PDE6HQ13956 83 aa9.13□□□□□ -0.95
CDH1-210ENST00000566612 PET117Q6UWS5 81 aa9.13□□□□□ -0.95
CDH1-210ENST00000566612 OR11H6Q8NGC7 330 aa9.13□□□□□ -0.95
CDH1-210ENST00000566612 TMEM14CQ9P0S9 112 aa9.13□□□□□ -0.95
CDH1-210ENST00000566612 PCSK5Q92824 1860 aa9.13□□□□□ -0.95
CDH1-210ENST00000566612 LTAP01374 205 aa9.13□□□□□ -0.95
CDH1-210ENST00000566612 TSPOP30536 169 aa9.13□□□□□ -0.95
CDH1-210ENST00000566612 RPL24P83731 157 aaKnown RBP9.13□□□□□ -0.95
CDH1-210ENST00000566612 IFI27L1Q96BM0 104 aa9.13□□□□□ -0.95
CDH1-210ENST00000566612 CBY1Q9Y3M2 126 aa9.13□□□□□ -0.95
CDH1-210ENST00000566612 SMIM12Q96EX1 92 aa9.12□□□□□ -0.95
CDH1-210ENST00000566612 C20orf144Q9BQM9 153 aa9.12□□□□□ -0.95
CDH1-210ENST00000566612 IGHV3OR16-12A0A075B7B8 117 aa9.12□□□□□ -0.95
CDH1-210ENST00000566612 C21orf62-AS1Q17RA5 79 aa9.12□□□□□ -0.95
CDH1-210ENST00000566612 PRR25Q96S07 402 aa9.12□□□□□ -0.95
CDH1-210ENST00000566612 JKAMPQ9P055 326 aa9.12□□□□□ -0.95
CDH1-210ENST00000566612 POLQO75417 2590 aa9.12□□□□□ -0.95
CDH1-210ENST00000566612 CT83Q5H943 113 aa9.12□□□□□ -0.95
CDH1-210ENST00000566612 GFRA4Q9GZZ7 299 aa9.12□□□□□ -0.95
CDH1-210ENST00000566612 GAGE10A6NGK3 116 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms