RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 CT45A10P0DMU9 189 aa12.12□□□□□ -0.47
GTF3C1-205ENST00000564747 MFAP4P55083 255 aa12.12□□□□□ -0.47
GTF3C1-205ENST00000564747 IGLV11-55A0A075B6I3 123 aa12.12□□□□□ -0.47
GTF3C1-205ENST00000564747 CD5LO43866 347 aa12.12□□□□□ -0.47
GTF3C1-205ENST00000564747 IFI27P40305 119 aaPredicted RBP12.12□□□□□ -0.47
GTF3C1-205ENST00000564747 NDPQ00604 133 aa12.12□□□□□ -0.47
GTF3C1-205ENST00000564747 OCIAD2Q56VL3 154 aa12.12□□□□□ -0.47
GTF3C1-205ENST00000564747 FA2HQ7L5A8 372 aa12.12□□□□□ -0.47
GTF3C1-205ENST00000564747 ZNF747Q9BV97 191 aa12.12□□□□□ -0.47
GTF3C1-205ENST00000564747 RAB1BQ9H0U4 201 aa12.12□□□□□ -0.47
GTF3C1-205ENST00000564747 LOC389332A0A1B0GUA5 103 aa12.11□□□□□ -0.47
GTF3C1-205ENST00000564747 NCR2O95944 276 aa12.11□□□□□ -0.47
GTF3C1-205ENST00000564747 LOXL1Q08397 574 aaPredicted RBP12.11□□□□□ -0.47
GTF3C1-205ENST00000564747 LINC01545Q5VT33 79 aa12.11□□□□□ -0.47
GTF3C1-205ENST00000564747 MED13LQ71F56 2210 aa12.11□□□□□ -0.47
GTF3C1-205ENST00000564747 IGKV2-40A0A087WW87 121 aaPredicted RBP12.11□□□□□ -0.47
GTF3C1-205ENST00000564747 A0A1B0GW15 77 aa12.11□□□□□ -0.47
GTF3C1-205ENST00000564747 NCBP2LA6PVI3 153 aaKnown RBP12.11□□□□□ -0.47
GTF3C1-205ENST00000564747 IGKV2D-40P01614 121 aaPredicted RBP12.11□□□□□ -0.47
GTF3C1-205ENST00000564747 GPR183P32249 361 aa12.11□□□□□ -0.47
GTF3C1-205ENST00000564747 PSG9Q00887 426 aa12.11□□□□□ -0.47
GTF3C1-205ENST00000564747 CDSNQ15517 529 aa12.11□□□□□ -0.47
GTF3C1-205ENST00000564747 WNK2Q9Y3S1 2297 aa12.1□□□□□ -0.47
GTF3C1-205ENST00000564747 D6R8Y8 96 aa12.1□□□□□ -0.47
GTF3C1-205ENST00000564747 SH2D1AO60880 128 aa12.1□□□□□ -0.47
GTF3C1-205ENST00000564747 CEACAM3P40198 252 aa12.1□□□□□ -0.47
GTF3C1-205ENST00000564747 PDE6HQ13956 83 aa12.1□□□□□ -0.47
GTF3C1-205ENST00000564747 Q6AWC8 147 aa12.1□□□□□ -0.47
GTF3C1-205ENST00000564747 DYNAPQ8N1N2 210 aa12.1□□□□□ -0.47
GTF3C1-205ENST00000564747 TMEM189A5PLL7 270 aa12.1□□□□□ -0.47
GTF3C1-205ENST00000564747 IGFL4Q6B9Z1 124 aa12.1□□□□□ -0.47
GTF3C1-205ENST00000564747 ZNF562Q6V9R5 426 aa12.1□□□□□ -0.47
GTF3C1-205ENST00000564747 ZNF493Q6ZR52 646 aa12.1□□□□□ -0.47
GTF3C1-205ENST00000564747 AMN1Q8IY45 258 aa12.1□□□□□ -0.47
GTF3C1-205ENST00000564747 ODF3BA8MYP8 253 aa12.09□□□□□ -0.47
GTF3C1-205ENST00000564747 CSN1S1P47710 185 aa12.09□□□□□ -0.47
GTF3C1-205ENST00000564747 FOXC1Q12948 553 aa12.09□□□□□ -0.47
GTF3C1-205ENST00000564747 FOXE3Q13461 319 aa12.09□□□□□ -0.47
GTF3C1-205ENST00000564747 OR10AG1Q8NH19 301 aa12.09□□□□□ -0.47
GTF3C1-205ENST00000564747 ARPC1AQ92747 370 aa12.09□□□□□ -0.47
GTF3C1-205ENST00000564747 C21orf62Q9NYP8 219 aa12.09□□□□□ -0.47
GTF3C1-205ENST00000564747 PEF1Q9UBV8 284 aaKnown RBP12.09□□□□□ -0.47
GTF3C1-205ENST00000564747 IGHV3OR16-8A0A075B7F1 116 aa12.09□□□□□ -0.47
GTF3C1-205ENST00000564747 A0A096LNJ9 63 aa12.09□□□□□ -0.47
GTF3C1-205ENST00000564747 NPIPB5A8MRT5 1133 aa12.09□□□□□ -0.47
GTF3C1-205ENST00000564747 K7ENP7 123 aa12.09□□□□□ -0.47
GTF3C1-205ENST00000564747 COX8AP10176 69 aa12.09□□□□□ -0.47
GTF3C1-205ENST00000564747 TMEM190Q8WZ59 177 aa12.09□□□□□ -0.47
GTF3C1-205ENST00000564747 PRTN3P24158 256 aa12.08□□□□□ -0.48
GTF3C1-205ENST00000564747 FXYD7P58549 80 aa12.08□□□□□ -0.48
GTF3C1-205ENST00000564747 SIGLEC8Q9NYZ4 499 aa12.08□□□□□ -0.48
GTF3C1-205ENST00000564747 SNAI2O43623 268 aa12.08□□□□□ -0.48
GTF3C1-205ENST00000564747 FAM104BQ5XKR9 115 aa12.08□□□□□ -0.48
GTF3C1-205ENST00000564747 TRAV8-6A0A0B4J262 113 aa12.07□□□□□ -0.48
GTF3C1-205ENST00000564747 IGHV3-35A0A0C4DH35 117 aa12.07□□□□□ -0.48
GTF3C1-205ENST00000564747 GAGE12BA1L429 117 aa12.07□□□□□ -0.48
GTF3C1-205ENST00000564747 SMIM15Q7Z3B0 74 aa12.07□□□□□ -0.48
GTF3C1-205ENST00000564747 S100A7AQ86SG5 101 aa12.07□□□□□ -0.48
GTF3C1-205ENST00000564747 TTC9CQ8N5M4 171 aa12.07□□□□□ -0.48
GTF3C1-205ENST00000564747 Q8TAT8 98 aa12.07□□□□□ -0.48
GTF3C1-205ENST00000564747 TIMD4Q96H15 378 aa12.07□□□□□ -0.48
GTF3C1-205ENST00000564747 HLA-DMBP28068 263 aa12.07□□□□□ -0.48
GTF3C1-205ENST00000564747 C2orf91Q6ZV80 131 aa12.07□□□□□ -0.48
GTF3C1-205ENST00000564747 OR8A1Q8NGG7 326 aa12.07□□□□□ -0.48
GTF3C1-205ENST00000564747 PRELID3AQ96N28 172 aa12.07□□□□□ -0.48
GTF3C1-205ENST00000564747 PRR25Q96S07 402 aa12.07□□□□□ -0.48
GTF3C1-205ENST00000564747 SPTBN4Q9H254 2564 aa12.07□□□□□ -0.48
GTF3C1-205ENST00000564747 C7orf71A4D174 169 aa12.07□□□□□ -0.48
GTF3C1-205ENST00000564747 CCL21O00585 134 aa12.07□□□□□ -0.48
GTF3C1-205ENST00000564747 EGR2P11161 476 aaPredicted RBP12.07□□□□□ -0.48
GTF3C1-205ENST00000564747 ZNF80P51504 273 aaPredicted RBP12.07□□□□□ -0.48
GTF3C1-205ENST00000564747 ZNF48Q96MX3 618 aaPredicted RBP12.07□□□□□ -0.48
GTF3C1-205ENST00000564747 VGLL1Q99990 258 aa12.07□□□□□ -0.48
GTF3C1-205ENST00000564747 SMAD5-AS1Q9Y6J3 95 aa12.07□□□□□ -0.48
GTF3C1-205ENST00000564747 M0R1W7 72 aa12.06□□□□□ -0.48
GTF3C1-205ENST00000564747 CTSGP08311 255 aa12.06□□□□□ -0.48
GTF3C1-205ENST00000564747 CACNA1BQ00975 2339 aa12.06□□□□□ -0.48
GTF3C1-205ENST00000564747 FBXL19-AS1Q494R0 122 aa12.06□□□□□ -0.48
GTF3C1-205ENST00000564747 MRPL51Q4U2R6 128 aaKnown RBP12.06□□□□□ -0.48
GTF3C1-205ENST00000564747 PIP4P2Q8N4L2 257 aa12.06□□□□□ -0.48
GTF3C1-205ENST00000564747 U3KQK5 164 aa12.06□□□□□ -0.48
GTF3C1-205ENST00000564747 SMKR1H3BMG3 65 aa12.05□□□□□ -0.48
GTF3C1-205ENST00000564747 IGHG4P01861 327 aa12.05□□□□□ -0.48
GTF3C1-205ENST00000564747 RPL7P18124 248 aaKnown RBP12.05□□□□□ -0.48
GTF3C1-205ENST00000564747 NBL1P41271 181 aa12.05□□□□□ -0.48
GTF3C1-205ENST00000564747 VMO1Q7Z5L0 202 aa12.05□□□□□ -0.48
GTF3C1-205ENST00000564747 ORMDL3Q8N138 153 aa12.05□□□□□ -0.48
GTF3C1-205ENST00000564747 ZFHX3Q15911 3703 aa12.05□□□□□ -0.48
GTF3C1-205ENST00000564747 K7ERU9 68 aa12.05□□□□□ -0.48
GTF3C1-205ENST00000564747 SEC11AP67812 179 aa12.05□□□□□ -0.48
GTF3C1-205ENST00000564747 TMEM97Q5BJF2 176 aa12.05□□□□□ -0.48
GTF3C1-205ENST00000564747 ZNF575Q86XF7 245 aa12.04□□□□□ -0.48
GTF3C1-205ENST00000564747 THYN1Q9P016 225 aa12.04□□□□□ -0.48
GTF3C1-205ENST00000564747 TWIST1Q15672 202 aa12.04□□□□□ -0.48
GTF3C1-205ENST00000564747 COX8CQ7Z4L0 72 aa12.03□□□□□ -0.48
GTF3C1-205ENST00000564747 Q8N6K4 173 aa12.03□□□□□ -0.48
GTF3C1-205ENST00000564747 COL25A1Q9BXS0 654 aaPredicted RBP12.03□□□□□ -0.48
GTF3C1-205ENST00000564747 RABAC1Q9UI14 185 aa12.03□□□□□ -0.48
GTF3C1-205ENST00000564747 ATRXP46100 2492 aa12.03□□□□□ -0.48
GTF3C1-205ENST00000564747 TCTAP57738 103 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms