RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 ARPC5O15511 151 aa12.5□□□□□ -0.41
USB1-209ENST00000564387 FXYD7P58549 80 aa12.5□□□□□ -0.41
USB1-209ENST00000564387 TAS2R45P59539 299 aa12.5□□□□□ -0.41
USB1-209ENST00000564387 RAB2AP61019 212 aa12.5□□□□□ -0.41
USB1-209ENST00000564387 HIST1H1AQ02539 215 aaPredicted RBP12.5□□□□□ -0.41
USB1-209ENST00000564387 KHDC3LQ587J8 217 aa12.5□□□□□ -0.41
USB1-209ENST00000564387 C1orf158Q8N1D5 194 aa12.5□□□□□ -0.41
USB1-209ENST00000564387 LYPD1Q8N2G4 141 aa12.5□□□□□ -0.41
USB1-209ENST00000564387 RPP25LQ8N5L8 163 aaKnown RBP12.5□□□□□ -0.41
USB1-209ENST00000564387 GNPNAT1Q96EK6 184 aaPredicted RBP12.5□□□□□ -0.41
USB1-209ENST00000564387 BORCS7-ASMTA0A0B4J1R7 106 aa12.49□□□□□ -0.41
USB1-209ENST00000564387 IGHV4-28A0A0C4DH34 117 aa12.49□□□□□ -0.41
USB1-209ENST00000564387 SMIM9A6NGZ8 99 aa12.49□□□□□ -0.41
USB1-209ENST00000564387 BOLA2-SMG1P6H3BVE0 249 aa12.49□□□□□ -0.41
USB1-209ENST00000564387 JTBO76095 146 aa12.49□□□□□ -0.41
USB1-209ENST00000564387 OR10J4P0C629 311 aa12.49□□□□□ -0.41
USB1-209ENST00000564387 PQLC2Q6ZP29 291 aa12.49□□□□□ -0.41
USB1-209ENST00000564387 KCNRGQ8N5I3 272 aa12.49□□□□□ -0.41
USB1-209ENST00000564387 OR10G4Q8NGN3 311 aa12.49□□□□□ -0.41
USB1-209ENST00000564387 OR10G9Q8NGN4 311 aa12.49□□□□□ -0.41
USB1-209ENST00000564387 OR10G7Q8NGN6 311 aa12.49□□□□□ -0.41
USB1-209ENST00000564387 BLNKQ8WV28 456 aa12.49□□□□□ -0.41
USB1-209ENST00000564387 ST6GAL2Q96JF0 529 aa12.49□□□□□ -0.41
USB1-209ENST00000564387 ODF3Q96PU9 254 aa12.49□□□□□ -0.41
USB1-209ENST00000564387 SH3BGRL3Q9H299 93 aa12.49□□□□□ -0.41
USB1-209ENST00000564387 TENM2Q9NT68 2774 aa12.49□□□□□ -0.41
USB1-209ENST00000564387 NPIPB6E9PJ23 425 aa12.48□□□□□ -0.41
USB1-209ENST00000564387 M0R3E3 92 aa12.48□□□□□ -0.41
USB1-209ENST00000564387 OR7C2O60412 319 aa12.48□□□□□ -0.41
USB1-209ENST00000564387 MBP02144 154 aa12.48□□□□□ -0.41
USB1-209ENST00000564387 SPINK13Q1W4C9 94 aa12.48□□□□□ -0.41
USB1-209ENST00000564387 EXOC3-AS1Q8N2X6 119 aa12.48□□□□□ -0.41
USB1-209ENST00000564387 A0A1W2PPV4 95 aa12.47□□□□□ -0.41
USB1-209ENST00000564387 M0R2Z0 102 aa12.47□□□□□ -0.41
USB1-209ENST00000564387 STAG3L2P0CL84 134 aa12.47□□□□□ -0.41
USB1-209ENST00000564387 STAG3L3P0CL85 134 aa12.47□□□□□ -0.41
USB1-209ENST00000564387 ZFAND6Q6FIF0 208 aa12.47□□□□□ -0.41
USB1-209ENST00000564387 OR10J6PQ8NGY7 276 aa12.47□□□□□ -0.41
USB1-209ENST00000564387 SUN5Q8TC36 379 aa12.47□□□□□ -0.41
USB1-209ENST00000564387 PHYHIPLQ96FC7 376 aa12.47□□□□□ -0.41
USB1-209ENST00000564387 AAMDCQ9H7C9 122 aa12.47□□□□□ -0.41
USB1-209ENST00000564387 DEFB4AO15263 64 aa12.46□□□□□ -0.41
USB1-209ENST00000564387 PRB4P10163 310 aaPredicted RBP12.46□□□□□ -0.41
USB1-209ENST00000564387 UBE2L3P68036 154 aaKnown RBP12.46□□□□□ -0.41
USB1-209ENST00000564387 ICAM4Q14773 271 aa12.46□□□□□ -0.41
USB1-209ENST00000564387 FAM122CQ6P4D5 195 aa12.46□□□□□ -0.41
USB1-209ENST00000564387 GOLT1BQ9Y3E0 138 aa12.46□□□□□ -0.41
USB1-209ENST00000564387 A0A0D9SG52 128 aa12.45□□□□□ -0.42
USB1-209ENST00000564387 CT45A10P0DMU9 189 aa12.45□□□□□ -0.42
USB1-209ENST00000564387 CDKN1BP46527 198 aa12.45□□□□□ -0.42
USB1-209ENST00000564387 CDC34P49427 236 aaPredicted RBP12.45□□□□□ -0.42
USB1-209ENST00000564387 C9orf47Q6ZRZ4 202 aa12.45□□□□□ -0.42
USB1-209ENST00000564387 TCTE3Q8IZS6 198 aa12.45□□□□□ -0.42
USB1-209ENST00000564387 RAB24Q969Q5 203 aa12.45□□□□□ -0.42
USB1-209ENST00000564387 FAM19A4Q96LR4 140 aa12.45□□□□□ -0.42
USB1-209ENST00000564387 ARPC5LQ9BPX5 153 aa12.45□□□□□ -0.42
USB1-209ENST00000564387 EIF3GO75821 320 aaKnown RBP eCLIP12.44□□□□□ -0.42
USB1-209ENST00000564387 INSP01308 110 aa12.44□□□□□ -0.42
USB1-209ENST00000564387 RANP62826 216 aaKnown RBP12.44□□□□□ -0.42
USB1-209ENST00000564387 BAP18Q8IXM2 172 aa12.44□□□□□ -0.42
USB1-209ENST00000564387 ARL6IP6Q8N6S5 226 aa12.44□□□□□ -0.42
USB1-209ENST00000564387 C11orf45Q8TAV5 145 aa12.44□□□□□ -0.42
USB1-209ENST00000564387 LINC00477Q96M19 166 aa12.44□□□□□ -0.42
USB1-209ENST00000564387 C20orf144Q9BQM9 153 aa12.44□□□□□ -0.42
USB1-209ENST00000564387 AGPAT4-IT1Q9H0P7 198 aa12.44□□□□□ -0.42
USB1-209ENST00000564387 Q9H3A6 140 aa12.44□□□□□ -0.42
USB1-209ENST00000564387 TMEM189A5PLL7 270 aa12.43□□□□□ -0.42
USB1-209ENST00000564387 TSPOP30536 169 aa12.43□□□□□ -0.42
USB1-209ENST00000564387 TMEM256Q8N2U0 113 aa12.43□□□□□ -0.42
USB1-209ENST00000564387 TRAV12-2A0A075B6T6 113 aa12.42□□□□□ -0.42
USB1-209ENST00000564387 RBAKDNA6NC62 111 aa12.42□□□□□ -0.42
USB1-209ENST00000564387 SLC25A5P05141 298 aaKnown RBP12.42□□□□□ -0.42
USB1-209ENST00000564387 ARL14EPLP0DKL9 152 aa12.42□□□□□ -0.42
USB1-209ENST00000564387 ACTR3CQ9C0K3 210 aaPredicted RBP12.42□□□□□ -0.42
USB1-209ENST00000564387 PPP1R14DQ9NXH3 145 aa12.42□□□□□ -0.42
USB1-209ENST00000564387 IGHV3OR16-12A0A075B7B8 117 aa12.41□□□□□ -0.42
USB1-209ENST00000564387 TRBV7-9A0A0J9YWB2 115 aa12.41□□□□□ -0.42
USB1-209ENST00000564387 HMGB3O15347 200 aaKnown RBP12.41□□□□□ -0.42
USB1-209ENST00000564387 HBE1P02100 147 aa12.41□□□□□ -0.42
USB1-209ENST00000564387 NMBP08949 121 aa12.41□□□□□ -0.42
USB1-209ENST00000564387 CRISP2P16562 243 aa12.41□□□□□ -0.42
USB1-209ENST00000564387 ERCC8Q13216 396 aa12.41□□□□□ -0.42
USB1-209ENST00000564387 KIR3DS1Q14943 382 aa12.41□□□□□ -0.42
USB1-209ENST00000564387 ZNF726P1Q15940 193 aa12.41□□□□□ -0.42
USB1-209ENST00000564387 CEMP1Q6PRD7 247 aaPredicted RBP12.41□□□□□ -0.42
USB1-209ENST00000564387 SSX7Q7RTT5 188 aa12.41□□□□□ -0.42
USB1-209ENST00000564387 OTORQ9NRC9 128 aa12.41□□□□□ -0.42
USB1-209ENST00000564387 DYNC2H1Q8NCM8 4307 aaKnown RBP12.41□□□□□ -0.42
USB1-209ENST00000564387 IGKV2-40A0A087WW87 121 aaPredicted RBP12.4□□□□□ -0.42
USB1-209ENST00000564387 NUPR2A6NF83 97 aa12.4□□□□□ -0.42
USB1-209ENST00000564387 KLLNB2CW77 178 aa12.4□□□□□ -0.42
USB1-209ENST00000564387 BCL2L11O43521 198 aa12.4□□□□□ -0.42
USB1-209ENST00000564387 IGKV2D-40P01614 121 aaPredicted RBP12.4□□□□□ -0.42
USB1-209ENST00000564387 GCHFRP30047 84 aa12.4□□□□□ -0.42
USB1-209ENST00000564387 LEPP41159 167 aa12.4□□□□□ -0.42
USB1-209ENST00000564387 NANOS2P60321 138 aaKnown RBP12.4□□□□□ -0.42
USB1-209ENST00000564387 RRN3P1Q2M238 152 aa12.4□□□□□ -0.42
USB1-209ENST00000564387 GFI1BQ5VTD9 330 aa12.4□□□□□ -0.42
USB1-209ENST00000564387 RXFP4Q8TDU9 374 aa12.4□□□□□ -0.42
USB1-209ENST00000564387 VGLL1Q99990 258 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms