RNA–Protein interactions for RNA: ENST00000564079.5

TUBGCP4-208, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TUBGCP4, Length 6,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-208ENST00000564079 PPBPP02775 128 aa9.67□□□□□ -0.86
TUBGCP4-208ENST00000564079 UBE2WQ96B02 151 aa9.67□□□□□ -0.86
TUBGCP4-208ENST00000564079 SMAD5-AS1Q9Y6J3 95 aa9.67□□□□□ -0.86
TUBGCP4-208ENST00000564079 SPOCK3Q9BQ16 436 aa9.66□□□□□ -0.86
TUBGCP4-208ENST00000564079 MRPL27Q9P0M9 148 aaKnown RBP9.66□□□□□ -0.86
TUBGCP4-208ENST00000564079 ANK1P16157 1881 aa9.66□□□□□ -0.86
TUBGCP4-208ENST00000564079 IGHV1OR15-1A0A075B7D0 117 aa9.66□□□□□ -0.86
TUBGCP4-208ENST00000564079 OCC1Q8TAD7 63 aa9.66□□□□□ -0.86
TUBGCP4-208ENST00000564079 TMEM243Q9BU79 118 aa9.66□□□□□ -0.86
TUBGCP4-208ENST00000564079 LEPROTO15243 131 aa9.66□□□□□ -0.86
TUBGCP4-208ENST00000564079 RPL23P62829 140 aaKnown RBP9.66□□□□□ -0.86
TUBGCP4-208ENST00000564079 PMVKQ15126 192 aa9.66□□□□□ -0.86
TUBGCP4-208ENST00000564079 TRAV25A0A0B4J276 109 aa9.66□□□□□ -0.86
TUBGCP4-208ENST00000564079 NMBP08949 121 aa9.66□□□□□ -0.86
TUBGCP4-208ENST00000564079 CDKN1BP46527 198 aa9.66□□□□□ -0.86
TUBGCP4-208ENST00000564079 DIAPH2-AS1Q14236 149 aa9.66□□□□□ -0.86
TUBGCP4-208ENST00000564079 TEX48A0A1B0GUV7 120 aa9.65□□□□□ -0.86
TUBGCP4-208ENST00000564079 NDUFA4O00483 81 aa9.65□□□□□ -0.86
TUBGCP4-208ENST00000564079 TEX36Q5VZQ5 186 aa9.65□□□□□ -0.86
TUBGCP4-208ENST00000564079 GBF1Q92538 1859 aa9.65□□□□□ -0.86
TUBGCP4-208ENST00000564079 K7ERU9 68 aa9.65□□□□□ -0.86
TUBGCP4-208ENST00000564079 C15orf53Q8NAA6 179 aa9.65□□□□□ -0.86
TUBGCP4-208ENST00000564079 Q8TCH9 128 aa9.65□□□□□ -0.86
TUBGCP4-208ENST00000564079 WNK2Q9Y3S1 2297 aa9.65□□□□□ -0.86
TUBGCP4-208ENST00000564079 ADMP35318 185 aa9.65□□□□□ -0.86
TUBGCP4-208ENST00000564079 SEC11AP67812 179 aa9.65□□□□□ -0.86
TUBGCP4-208ENST00000564079 NHP2Q9NX24 153 aaKnown RBP9.65□□□□□ -0.86
TUBGCP4-208ENST00000564079 ROS1P08922 2347 aa9.65□□□□□ -0.86
TUBGCP4-208ENST00000564079 GTF3C1Q12789 2109 aa9.65□□□□□ -0.87
TUBGCP4-208ENST00000564079 TRPT1Q86TN4 253 aaKnown RBP9.65□□□□□ -0.87
TUBGCP4-208ENST00000564079 TPSG1Q9NRR2 321 aa9.65□□□□□ -0.87
TUBGCP4-208ENST00000564079 WDR83OSQ9Y284 106 aa9.65□□□□□ -0.87
TUBGCP4-208ENST00000564079 FREM3P0C091 2139 aa9.65□□□□□ -0.87
TUBGCP4-208ENST00000564079 IFITM3Q01628 133 aa9.64□□□□□ -0.87
TUBGCP4-208ENST00000564079 FRMPD3Q5JV73 1810 aa9.64□□□□□ -0.87
TUBGCP4-208ENST00000564079 RNASE2P10153 161 aaKnown RBP9.64□□□□□ -0.87
TUBGCP4-208ENST00000564079 TAL2Q16559 108 aa9.64□□□□□ -0.87
TUBGCP4-208ENST00000564079 RNF183Q96D59 192 aa9.64□□□□□ -0.87
TUBGCP4-208ENST00000564079 IFT22Q9H7X7 185 aa9.64□□□□□ -0.87
TUBGCP4-208ENST00000564079 SRP19P09132 144 aaKnown RBP9.64□□□□□ -0.87
TUBGCP4-208ENST00000564079 TMEM14BQ9NUH8 114 aa9.64□□□□□ -0.87
TUBGCP4-208ENST00000564079 A8MXK9 166 aa9.64□□□□□ -0.87
TUBGCP4-208ENST00000564079 WDR81Q562E7 1941 aa9.64□□□□□ -0.87
TUBGCP4-208ENST00000564079 NTF4P34130 210 aa9.64□□□□□ -0.87
TUBGCP4-208ENST00000564079 PROK2Q9HC23 129 aa9.64□□□□□ -0.87
TUBGCP4-208ENST00000564079 PKDREJQ9NTG1 2253 aa9.64□□□□□ -0.87
TUBGCP4-208ENST00000564079 ZNF503-AS2A6NEH8 195 aa9.64□□□□□ -0.87
TUBGCP4-208ENST00000564079 CREBBPQ92793 2442 aa9.63□□□□□ -0.87
TUBGCP4-208ENST00000564079 TSKUQ8WUA8 353 aa9.63□□□□□ -0.87
TUBGCP4-208ENST00000564079 C1orf43Q9BWL3 253 aa9.63□□□□□ -0.87
TUBGCP4-208ENST00000564079 IGHV7-4-1A0A0J9YVY3 117 aa9.63□□□□□ -0.87
TUBGCP4-208ENST00000564079 NDUFS5O43920 106 aa9.63□□□□□ -0.87
TUBGCP4-208ENST00000564079 ITGB1BP1O14713 200 aa9.63□□□□□ -0.87
TUBGCP4-208ENST00000564079 SRSF2Q01130 221 aaKnown RBP9.63□□□□□ -0.87
TUBGCP4-208ENST00000564079 DEFB135Q30KP9 77 aa9.63□□□□□ -0.87
TUBGCP4-208ENST00000564079 ZNF843Q8N446 348 aa9.63□□□□□ -0.87
TUBGCP4-208ENST00000564079 C10orf105Q8TEF2 133 aa9.63□□□□□ -0.87
TUBGCP4-208ENST00000564079 PHF3Q92576 2039 aaKnown RBP9.63□□□□□ -0.87
TUBGCP4-208ENST00000564079 KIAA2026Q5HYC2 2103 aa9.63□□□□□ -0.87
TUBGCP4-208ENST00000564079 GREB1LQ9C091 1923 aaPredicted RBP9.63□□□□□ -0.87
TUBGCP4-208ENST00000564079 TRAV8-2A0A0B4J237 113 aa9.63□□□□□ -0.87
TUBGCP4-208ENST00000564079 SPART-AS1P0CW21 52 aa9.63□□□□□ -0.87
TUBGCP4-208ENST00000564079 PRORYQ9H606 182 aa9.63□□□□□ -0.87
TUBGCP4-208ENST00000564079 XCL1P47992 114 aa9.62□□□□□ -0.87
TUBGCP4-208ENST00000564079 C5orf30Q96GV9 206 aa9.62□□□□□ -0.87
TUBGCP4-208ENST00000564079 SHANK2-AS3Q9BTD1 123 aa9.62□□□□□ -0.87
TUBGCP4-208ENST00000564079 TIMM21Q9BVV7 248 aa9.62□□□□□ -0.87
TUBGCP4-208ENST00000564079 HIST1H4AP62805 103 aaKnown RBP9.62□□□□□ -0.87
TUBGCP4-208ENST00000564079 BLCAPP62952 87 aa9.62□□□□□ -0.87
TUBGCP4-208ENST00000564079 DEFB105AQ8NG35 78 aa9.62□□□□□ -0.87
TUBGCP4-208ENST00000564079 IFI27L1Q96BM0 104 aa9.62□□□□□ -0.87
TUBGCP4-208ENST00000564079 TMEM242Q9NWH2 141 aa9.62□□□□□ -0.87
TUBGCP4-208ENST00000564079 RHODO00212 210 aa9.62□□□□□ -0.87
TUBGCP4-208ENST00000564079 NIT1Q86X76 327 aa9.62□□□□□ -0.87
TUBGCP4-208ENST00000564079 ATP6V0BQ99437 205 aa9.62□□□□□ -0.87
TUBGCP4-208ENST00000564079 LGALS1P09382 135 aaKnown RBP9.62□□□□□ -0.87
TUBGCP4-208ENST00000564079 TIMM17AQ99595 171 aa9.62□□□□□ -0.87
TUBGCP4-208ENST00000564079 ABCA1O95477 2261 aa9.62□□□□□ -0.87
TUBGCP4-208ENST00000564079 MUC6Q6W4X9 2439 aa9.62□□□□□ -0.87
TUBGCP4-208ENST00000564079 TMEM238C9JI98 176 aa9.61□□□□□ -0.87
TUBGCP4-208ENST00000564079 SRSF8Q9BRL6 282 aaKnown RBP9.61□□□□□ -0.87
TUBGCP4-208ENST00000564079 WFDC1Q9HC57 220 aa9.61□□□□□ -0.87
TUBGCP4-208ENST00000564079 KLF12Q9Y4X4 402 aa9.61□□□□□ -0.87
TUBGCP4-208ENST00000564079 NHLRC3Q5JS37 347 aa9.61□□□□□ -0.87
TUBGCP4-208ENST00000564079 CITED2Q99967 270 aaPredicted RBP9.61□□□□□ -0.87
TUBGCP4-208ENST00000564079 SPTAN1Q13813 2472 aaKnown RBP9.61□□□□□ -0.87
TUBGCP4-208ENST00000564079 VWA8A3KMH1 1905 aa9.61□□□□□ -0.87
TUBGCP4-208ENST00000564079 PLEKHB2Q96CS7 222 aa9.61□□□□□ -0.87
TUBGCP4-208ENST00000564079 GSN-AS1Q9NRJ2 163 aa9.61□□□□□ -0.87
TUBGCP4-208ENST00000564079 FGF16O43320 207 aa9.61□□□□□ -0.87
TUBGCP4-208ENST00000564079 TNFRSF6BO95407 300 aa9.61□□□□□ -0.87
TUBGCP4-208ENST00000564079 C17orf58Q2M2W7 97 aa9.61□□□□□ -0.87
TUBGCP4-208ENST00000564079 A0A1B0GW64 132 aa9.61□□□□□ -0.87
TUBGCP4-208ENST00000564079 CLPSL1A2RUU4 121 aa9.61□□□□□ -0.87
TUBGCP4-208ENST00000564079 A8MWV9 139 aa9.61□□□□□ -0.87
TUBGCP4-208ENST00000564079 CTAG1AP78358 180 aa9.61□□□□□ -0.87
TUBGCP4-208ENST00000564079 OSTCQ9NRP0 149 aa9.61□□□□□ -0.87
TUBGCP4-208ENST00000564079 MYMXA0A1B0GTQ4 84 aa9.61□□□□□ -0.87
TUBGCP4-208ENST00000564079 F6UB75 175 aa9.61□□□□□ -0.87
TUBGCP4-208ENST00000564079 CENPVL3A0A0U1RRI6 287 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms