RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 DSCAML1Q8TD84 2053 aa10.13□□□□□ -0.79
COMMD4-209ENST00000564068 EPG5Q9HCE0 2579 aa10.13□□□□□ -0.79
COMMD4-209ENST00000564068 H3BMG7 143 aa10.13□□□□□ -0.79
COMMD4-209ENST00000564068 RBX1P62877 108 aa10.13□□□□□ -0.79
COMMD4-209ENST00000564068 FAM104BQ5XKR9 115 aa10.13□□□□□ -0.79
COMMD4-209ENST00000564068 WFDC12Q8WWY7 111 aa10.13□□□□□ -0.79
COMMD4-209ENST00000564068 ARPC1AQ92747 370 aa10.13□□□□□ -0.79
COMMD4-209ENST00000564068 DKK2Q9UBU2 259 aa10.13□□□□□ -0.79
COMMD4-209ENST00000564068 NBR2O15453 112 aa10.12□□□□□ -0.79
COMMD4-209ENST00000564068 LY6DQ14210 128 aa10.12□□□□□ -0.79
COMMD4-209ENST00000564068 CLEC19AQ6UXS0 136 aa10.12□□□□□ -0.79
COMMD4-209ENST00000564068 TEX29Q8N6K0 151 aa10.12□□□□□ -0.79
COMMD4-209ENST00000564068 PGPEP1Q9NXJ5 209 aa10.12□□□□□ -0.79
COMMD4-209ENST00000564068 ANKRD11Q6UB99 2663 aaPredicted RBP10.12□□□□□ -0.79
COMMD4-209ENST00000564068 CNTFRP26992 372 aa10.12□□□□□ -0.79
COMMD4-209ENST00000564068 CHTOPQ9Y3Y2 248 aaKnown RBP10.12□□□□□ -0.79
COMMD4-209ENST00000564068 C5orf42Q9H799 3197 aa10.12□□□□□ -0.79
COMMD4-209ENST00000564068 TMEM8BA6NDV4 472 aa10.12□□□□□ -0.79
COMMD4-209ENST00000564068 IGHV1-8P0DP01 117 aa10.12□□□□□ -0.79
COMMD4-209ENST00000564068 LYPD2Q6UXB3 125 aa10.12□□□□□ -0.79
COMMD4-209ENST00000564068 GLMPQ8WWB7 406 aa10.12□□□□□ -0.79
COMMD4-209ENST00000564068 LINC01560Q8TB33 94 aa10.12□□□□□ -0.79
COMMD4-209ENST00000564068 TEX48A0A1B0GUV7 120 aa10.11□□□□□ -0.79
COMMD4-209ENST00000564068 HAX1O00165 279 aa10.11□□□□□ -0.79
COMMD4-209ENST00000564068 SPINK8P0C7L1 97 aa10.11□□□□□ -0.79
COMMD4-209ENST00000564068 PRTN3P24158 256 aa10.11□□□□□ -0.79
COMMD4-209ENST00000564068 C2CD3Q4AC94 2353 aa10.11□□□□□ -0.79
COMMD4-209ENST00000564068 C2orf70A6NJV1 201 aa10.11□□□□□ -0.79
COMMD4-209ENST00000564068 LAGE3Q14657 143 aa10.11□□□□□ -0.79
COMMD4-209ENST00000564068 MRPL51Q4U2R6 128 aaKnown RBP10.11□□□□□ -0.79
COMMD4-209ENST00000564068 FAM120AOSQ5T036 256 aa10.11□□□□□ -0.79
COMMD4-209ENST00000564068 SMPXQ9UHP9 88 aa10.11□□□□□ -0.79
COMMD4-209ENST00000564068 A8MWV9 139 aa10.11□□□□□ -0.79
COMMD4-209ENST00000564068 K7EMI3 77 aa10.11□□□□□ -0.79
COMMD4-209ENST00000564068 PROP1O75360 226 aa10.11□□□□□ -0.79
COMMD4-209ENST00000564068 PF4V1P10720 104 aa10.11□□□□□ -0.79
COMMD4-209ENST00000564068 RAB9AP51151 201 aa10.11□□□□□ -0.79
COMMD4-209ENST00000564068 IGHV1-3A0A0C4DH29 117 aa10.1□□□□□ -0.79
COMMD4-209ENST00000564068 TNFRSF6BO95407 300 aa10.1□□□□□ -0.79
COMMD4-209ENST00000564068 CLEC2AQ6UVW9 174 aa10.1□□□□□ -0.79
COMMD4-209ENST00000564068 C17orf77Q96MU5 243 aa10.1□□□□□ -0.79
COMMD4-209ENST00000564068 TTTY13Q9BZ97 58 aa10.1□□□□□ -0.79
COMMD4-209ENST00000564068 NPYP01303 97 aa10.1□□□□□ -0.79
COMMD4-209ENST00000564068 ZNF56Q15929 161 aa10.1□□□□□ -0.79
COMMD4-209ENST00000564068 LGALS9BQ3B8N2 356 aa10.1□□□□□ -0.79
COMMD4-209ENST00000564068 LGALS9CQ6DKI2 356 aa10.1□□□□□ -0.79
COMMD4-209ENST00000564068 IGF2BP2-AS1Q96M15 143 aa10.1□□□□□ -0.79
COMMD4-209ENST00000564068 GAGE12HA6NDE8 117 aa10.1□□□□□ -0.79
COMMD4-209ENST00000564068 PATE2Q6UY27 113 aa10.1□□□□□ -0.79
COMMD4-209ENST00000564068 CTRLP40313 264 aa10.09□□□□□ -0.79
COMMD4-209ENST00000564068 ASIPP42127 132 aa10.09□□□□□ -0.79
COMMD4-209ENST00000564068 P0C879 139 aa10.09□□□□□ -0.79
COMMD4-209ENST00000564068 GTSF1Q8WW33 167 aa10.09□□□□□ -0.79
COMMD4-209ENST00000564068 FAM167A-AS1Q96KT0 104 aa10.09□□□□□ -0.79
COMMD4-209ENST00000564068 IGHV4-39P01824 125 aa10.09□□□□□ -0.79
COMMD4-209ENST00000564068 IGLC1P0CG04 106 aa10.09□□□□□ -0.79
COMMD4-209ENST00000564068 FAM159AQ6UWV7 190 aa10.09□□□□□ -0.79
COMMD4-209ENST00000564068 RNASE6Q93091 150 aaKnown RBP10.09□□□□□ -0.79
COMMD4-209ENST00000564068 SCRT2Q9NQ03 307 aa10.09□□□□□ -0.79
COMMD4-209ENST00000564068 PRRC2CQ9Y520 2896 aaKnown RBP10.09□□□□□ -0.79
COMMD4-209ENST00000564068 TRBV19A0A075B6N1 114 aa10.09□□□□□ -0.79
COMMD4-209ENST00000564068 IGHV3-64A0A075B6Q5 118 aa10.09□□□□□ -0.79
COMMD4-209ENST00000564068 IGHV3OR16-10A0A075B7F0 116 aa10.09□□□□□ -0.79
COMMD4-209ENST00000564068 ZNF474Q6S9Z5 364 aaPredicted RBP10.09□□□□□ -0.79
COMMD4-209ENST00000564068 SH2D6Q7Z4S9 175 aa10.09□□□□□ -0.79
COMMD4-209ENST00000564068 ABHD17AQ96GS6 310 aa10.09□□□□□ -0.79
COMMD4-209ENST00000564068 SHANK2-AS3Q9BTD1 123 aa10.09□□□□□ -0.79
COMMD4-209ENST00000564068 PLA2G2CQ5R387 149 aa10.08□□□□□ -0.8
COMMD4-209ENST00000564068 ZNF503Q96F45 646 aa10.08□□□□□ -0.8
COMMD4-209ENST00000564068 VGLL1Q99990 258 aa10.08□□□□□ -0.8
COMMD4-209ENST00000564068 KMT2EQ8IZD2 1858 aa10.08□□□□□ -0.8
COMMD4-209ENST00000564068 TMEM178BH3BS89 294 aa10.08□□□□□ -0.8
COMMD4-209ENST00000564068 CCL21O00585 134 aa10.08□□□□□ -0.8
COMMD4-209ENST00000564068 ERCC8Q13216 396 aa10.08□□□□□ -0.8
COMMD4-209ENST00000564068 SPRNQ5BIV9 151 aa10.08□□□□□ -0.8
COMMD4-209ENST00000564068 GDF5OSQ5U4N7 250 aa10.08□□□□□ -0.8
COMMD4-209ENST00000564068 DLX4Q92988 240 aaPredicted RBP10.08□□□□□ -0.8
COMMD4-209ENST00000564068 TLN1Q9Y490 2541 aaKnown RBP10.08□□□□□ -0.8
COMMD4-209ENST00000564068 TRAV2A0A0B4J234 112 aa10.08□□□□□ -0.8
COMMD4-209ENST00000564068 APOBEC3AP31941 199 aaPredicted RBP10.08□□□□□ -0.8
COMMD4-209ENST00000564068 POU2AF1Q16633 256 aa10.08□□□□□ -0.8
COMMD4-209ENST00000564068 NDUFS7O75251 213 aa10.07□□□□□ -0.8
COMMD4-209ENST00000564068 RNASE4P34096 147 aaKnown RBP10.07□□□□□ -0.8
COMMD4-209ENST00000564068 LINC00310P59036 64 aa10.07□□□□□ -0.8
COMMD4-209ENST00000564068 TMEM75Q8N9X5 138 aa10.07□□□□□ -0.8
COMMD4-209ENST00000564068 CHD7Q9P2D1 2997 aa10.07□□□□□ -0.8
COMMD4-209ENST00000564068 B9A039 149 aa10.07□□□□□ -0.8
COMMD4-209ENST00000564068 LTAP01374 205 aa10.07□□□□□ -0.8
COMMD4-209ENST00000564068 ORMDL2Q53FV1 153 aa10.07□□□□□ -0.8
COMMD4-209ENST00000564068 NPIPB6E9PJ23 425 aa10.07□□□□□ -0.8
COMMD4-209ENST00000564068 ATP5G2Q06055 141 aa10.07□□□□□ -0.8
COMMD4-209ENST00000564068 LINC01545Q5VT33 79 aa10.07□□□□□ -0.8
COMMD4-209ENST00000564068 NCOR1P1Q9H4R4 102 aa10.07□□□□□ -0.8
COMMD4-209ENST00000564068 MRPL35Q9NZE8 188 aaKnown RBP10.07□□□□□ -0.8
COMMD4-209ENST00000564068 LYPD1Q8N2G4 141 aa10.06□□□□□ -0.8
COMMD4-209ENST00000564068 NAV3Q8IVL0 2385 aa10.06□□□□□ -0.8
COMMD4-209ENST00000564068 IGLV2-8P01709 118 aa10.06□□□□□ -0.8
COMMD4-209ENST00000564068 GAGE2BQ13066 116 aa10.06□□□□□ -0.8
COMMD4-209ENST00000564068 GAGE2EQ4V326 116 aa10.06□□□□□ -0.8
COMMD4-209ENST00000564068 EEF1AKMT3Q96AZ1 226 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms