RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 SPRR3Q9UBC9 169 aa9.75□□□□□ -0.85
SCAMP2-204ENST00000563829 LINC01548A6NM66 108 aa9.75□□□□□ -0.85
SCAMP2-204ENST00000563829 FAM90A27PA6NNH2 459 aa9.75□□□□□ -0.85
SCAMP2-204ENST00000563829 MZT1Q08AG7 82 aa9.75□□□□□ -0.85
SCAMP2-204ENST00000563829 MSMPQ1L6U9 139 aa9.75□□□□□ -0.85
SCAMP2-204ENST00000563829 TMEM167AQ8TBQ9 72 aa9.75□□□□□ -0.85
SCAMP2-204ENST00000563829 TMEM158Q8WZ71 300 aa9.75□□□□□ -0.85
SCAMP2-204ENST00000563829 ENSAO43768 121 aaKnown RBP9.74□□□□□ -0.85
SCAMP2-204ENST00000563829 NDUFA3O95167 84 aa9.74□□□□□ -0.85
SCAMP2-204ENST00000563829 RBP4P02753 201 aa9.74□□□□□ -0.85
SCAMP2-204ENST00000563829 CFIP05156 583 aa9.74□□□□□ -0.85
SCAMP2-204ENST00000563829 SRSF1Q07955 248 aaKnown RBP eCLIP9.74□□□□□ -0.85
SCAMP2-204ENST00000563829 GAGE5Q13069 117 aa9.74□□□□□ -0.85
SCAMP2-204ENST00000563829 GAGE6Q13070 117 aa9.74□□□□□ -0.85
SCAMP2-204ENST00000563829 TMEM75Q8N9X5 138 aa9.74□□□□□ -0.85
SCAMP2-204ENST00000563829 OR4C13Q8NGP0 309 aa9.74□□□□□ -0.85
SCAMP2-204ENST00000563829 SMG1Q96Q15 3661 aaKnown RBP9.74□□□□□ -0.85
SCAMP2-204ENST00000563829 IGHV3-72A0A0B4J1Y9 119 aa9.74□□□□□ -0.85
SCAMP2-204ENST00000563829 CFAP126Q5VTH2 177 aa9.74□□□□□ -0.85
SCAMP2-204ENST00000563829 RITA1Q96K30 269 aa9.74□□□□□ -0.85
SCAMP2-204ENST00000563829 HOXA3O43365 443 aaPredicted RBP9.73□□□□□ -0.85
SCAMP2-204ENST00000563829 SH2D1AO60880 128 aa9.73□□□□□ -0.85
SCAMP2-204ENST00000563829 GATA1P15976 413 aaPredicted RBP9.73□□□□□ -0.85
SCAMP2-204ENST00000563829 HOXB4P17483 251 aaPredicted RBP9.73□□□□□ -0.85
SCAMP2-204ENST00000563829 ZNF71Q9NQZ8 489 aaPredicted RBP9.73□□□□□ -0.85
SCAMP2-204ENST00000563829 IL4P05112 153 aa9.73□□□□□ -0.85
SCAMP2-204ENST00000563829 TRGV5A0A0B4J1U4 118 aa9.73□□□□□ -0.85
SCAMP2-204ENST00000563829 INS-IGF2F8WCM5 200 aa9.73□□□□□ -0.85
SCAMP2-204ENST00000563829 SRSF6Q13247 344 aaKnown RBP9.73□□□□□ -0.85
SCAMP2-204ENST00000563829 MORN3Q6PF18 240 aaPredicted RBP9.73□□□□□ -0.85
SCAMP2-204ENST00000563829 Q6ZT83 130 aa9.73□□□□□ -0.85
SCAMP2-204ENST00000563829 ZNF833PQ6ZTB9 187 aa9.73□□□□□ -0.85
SCAMP2-204ENST00000563829 DLX4Q92988 240 aaPredicted RBP9.73□□□□□ -0.85
SCAMP2-204ENST00000563829 RPEQ96AT9 228 aa9.73□□□□□ -0.85
SCAMP2-204ENST00000563829 ROS1P08922 2347 aa9.72□□□□□ -0.85
SCAMP2-204ENST00000563829 PLCE1Q9P212 2302 aa9.72□□□□□ -0.85
SCAMP2-204ENST00000563829 TRBV19A0A075B6N1 114 aa9.72□□□□□ -0.85
SCAMP2-204ENST00000563829 NCBP2LA6PVI3 153 aaKnown RBP9.72□□□□□ -0.85
SCAMP2-204ENST00000563829 SHISA9B4DS77 424 aa9.72□□□□□ -0.85
SCAMP2-204ENST00000563829 CNIH1O95406 144 aa9.72□□□□□ -0.85
SCAMP2-204ENST00000563829 CCL3L1P16619 93 aa9.72□□□□□ -0.85
SCAMP2-204ENST00000563829 HERV-K104P63124 156 aa9.72□□□□□ -0.85
SCAMP2-204ENST00000563829 PSMG4Q5JS54 123 aa9.72□□□□□ -0.85
SCAMP2-204ENST00000563829 C6orf15Q6UXA7 325 aaPredicted RBP9.72□□□□□ -0.85
SCAMP2-204ENST00000563829 ZFP2Q6ZN57 461 aa9.72□□□□□ -0.85
SCAMP2-204ENST00000563829 NGBQ9NPG2 151 aa9.72□□□□□ -0.85
SCAMP2-204ENST00000563829 TGFAP01135 160 aa9.72□□□□□ -0.85
SCAMP2-204ENST00000563829 CRYGCP07315 174 aa9.72□□□□□ -0.85
SCAMP2-204ENST00000563829 VSTM5A8MXK1 200 aa9.71□□□□□ -0.85
SCAMP2-204ENST00000563829 H3BVH4 76 aa9.71□□□□□ -0.85
SCAMP2-204ENST00000563829 TAL2Q16559 108 aa9.71□□□□□ -0.85
SCAMP2-204ENST00000563829 ZFAND6Q6FIF0 208 aa9.71□□□□□ -0.85
SCAMP2-204ENST00000563829 KALRNO60229 2985 aa9.71□□□□□ -0.85
SCAMP2-204ENST00000563829 IGHV1-18A0A0C4DH31 117 aa9.71□□□□□ -0.86
SCAMP2-204ENST00000563829 LINC01549A6NIU2 74 aa9.71□□□□□ -0.86
SCAMP2-204ENST00000563829 A6NJY4 79 aa9.71□□□□□ -0.86
SCAMP2-204ENST00000563829 TNFRSF6BO95407 300 aa9.71□□□□□ -0.86
SCAMP2-204ENST00000563829 SIGLEC15Q6ZMC9 328 aa9.71□□□□□ -0.86
SCAMP2-204ENST00000563829 TEX29Q8N6K0 151 aa9.71□□□□□ -0.86
SCAMP2-204ENST00000563829 LOC400499M0QZD8 3231 aa9.71□□□□□ -0.86
SCAMP2-204ENST00000563829 CARD19Q96LW7 228 aa9.71□□□□□ -0.86
SCAMP2-204ENST00000563829 KIR2DL4Q99706 377 aa9.71□□□□□ -0.86
SCAMP2-204ENST00000563829 ZGRF1Q86YA3 2104 aa9.7□□□□□ -0.86
SCAMP2-204ENST00000563829 K7ESF4 209 aa9.7□□□□□ -0.86
SCAMP2-204ENST00000563829 ATP5LO75964 103 aa9.7□□□□□ -0.86
SCAMP2-204ENST00000563829 LHBP01229 141 aa9.7□□□□□ -0.86
SCAMP2-204ENST00000563829 EGR2P11161 476 aaPredicted RBP9.7□□□□□ -0.86
SCAMP2-204ENST00000563829 ATP6V0E2Q8NHE4 81 aa9.7□□□□□ -0.86
SCAMP2-204ENST00000563829 GAFA1Q96PS6 74 aa9.7□□□□□ -0.86
SCAMP2-204ENST00000563829 RASL11BQ9BPW5 248 aa9.7□□□□□ -0.86
SCAMP2-204ENST00000563829 NCOR1O75376 2440 aa9.7□□□□□ -0.86
SCAMP2-204ENST00000563829 TRBV7-3A0A075B6L6 115 aa9.7□□□□□ -0.86
SCAMP2-204ENST00000563829 IGLV2-23P01705 113 aa9.7□□□□□ -0.86
SCAMP2-204ENST00000563829 VMA21Q3ZAQ7 101 aa9.7□□□□□ -0.86
SCAMP2-204ENST00000563829 SMIM20Q8N5G0 67 aa9.7□□□□□ -0.86
SCAMP2-204ENST00000563829 SCNM1Q9BWG6 230 aa9.7□□□□□ -0.86
SCAMP2-204ENST00000563829 TMEM14CQ9P0S9 112 aa9.7□□□□□ -0.86
SCAMP2-204ENST00000563829 TRBV20-1A0A075B6N2 111 aa9.69□□□□□ -0.86
SCAMP2-204ENST00000563829 NTN3O00634 580 aaPredicted RBP9.69□□□□□ -0.86
SCAMP2-204ENST00000563829 Q8TAT8 98 aa9.69□□□□□ -0.86
SCAMP2-204ENST00000563829 IGKV2-40A0A087WW87 121 aaPredicted RBP9.69□□□□□ -0.86
SCAMP2-204ENST00000563829 TRBV7-9A0A0J9YWB2 115 aa9.69□□□□□ -0.86
SCAMP2-204ENST00000563829 TRBV6-1A0A0K0K1D8 114 aa9.69□□□□□ -0.86
SCAMP2-204ENST00000563829 IGKV2D-40P01614 121 aaPredicted RBP9.69□□□□□ -0.86
SCAMP2-204ENST00000563829 MYOZ3Q8TDC0 251 aa9.69□□□□□ -0.86
SCAMP2-204ENST00000563829 PPDPFLQ8WWR9 84 aa9.69□□□□□ -0.86
SCAMP2-204ENST00000563829 NXT2Q9NPJ8 142 aaKnown RBP9.69□□□□□ -0.86
SCAMP2-204ENST00000563829 TPRP12270 2363 aaKnown RBP9.69□□□□□ -0.86
SCAMP2-204ENST00000563829 ORM1P02763 201 aa9.69□□□□□ -0.86
SCAMP2-204ENST00000563829 RNF185Q96GF1 192 aa9.69□□□□□ -0.86
SCAMP2-204ENST00000563829 RNF7Q9UBF6 113 aa9.69□□□□□ -0.86
SCAMP2-204ENST00000563829 RP1L1Q8IWN7 2480 aaPredicted RBP9.69□□□□□ -0.86
SCAMP2-204ENST00000563829 RPL27AP46776 148 aaKnown RBP9.68□□□□□ -0.86
SCAMP2-204ENST00000563829 RAI1Q7Z5J4 1906 aaPredicted RBP9.68□□□□□ -0.86
SCAMP2-204ENST00000563829 PATE3B3GLJ2 98 aa9.68□□□□□ -0.86
SCAMP2-204ENST00000563829 CNTFRP26992 372 aa9.68□□□□□ -0.86
SCAMP2-204ENST00000563829 EFNA4P52798 201 aa9.68□□□□□ -0.86
SCAMP2-204ENST00000563829 ZDBF2Q9HCK1 2354 aa9.68□□□□□ -0.86
SCAMP2-204ENST00000563829 LAMTOR5O43504 91 aa9.67□□□□□ -0.86
SCAMP2-204ENST00000563829 HLA-DRB4P13762 266 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms