RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 ZBTB8BQ8NAP8 495 aaPredicted RBP12.83□□□□□ -0.36
NME3-204ENST00000563498 VSIG2Q96IQ7 327 aa12.83□□□□□ -0.36
NME3-204ENST00000563498 V9GYH0 126 aa12.83□□□□□ -0.36
NME3-204ENST00000563498 SLC17A3O00476 420 aa12.82□□□□□ -0.36
NME3-204ENST00000563498 TSC22D2O75157 780 aa12.82□□□□□ -0.36
NME3-204ENST00000563498 SNRPCP09234 159 aaKnown RBP12.82□□□□□ -0.36
NME3-204ENST00000563498 IGLC2P0DOY2 106 aa12.82□□□□□ -0.36
NME3-204ENST00000563498 TAS2R30P59541 319 aa12.82□□□□□ -0.36
NME3-204ENST00000563498 CDPF1Q6NVV7 123 aa12.82□□□□□ -0.36
NME3-204ENST00000563498 Q6ZTI0 123 aa12.82□□□□□ -0.36
NME3-204ENST00000563498 GGACTQ9BVM4 153 aa12.82□□□□□ -0.36
NME3-204ENST00000563498 PTTG2Q9NZH5 202 aa12.82□□□□□ -0.36
NME3-204ENST00000563498 TRAV12-3A0A0B4J271 114 aa12.81□□□□□ -0.36
NME3-204ENST00000563498 NPIPB6E9PJ23 425 aa12.81□□□□□ -0.36
NME3-204ENST00000563498 H3BMQ9 156 aa12.81□□□□□ -0.36
NME3-204ENST00000563498 AGPAT2O15120 278 aa12.81□□□□□ -0.36
NME3-204ENST00000563498 SIVA1O15304 175 aa12.81□□□□□ -0.36
NME3-204ENST00000563498 CT45A10P0DMU9 189 aa12.81□□□□□ -0.36
NME3-204ENST00000563498 LYPD1Q8N2G4 141 aa12.81□□□□□ -0.36
NME3-204ENST00000563498 ZNF680Q8NEM1 530 aa12.81□□□□□ -0.36
NME3-204ENST00000563498 ZNF431Q8TF32 576 aaPredicted RBP12.81□□□□□ -0.36
NME3-204ENST00000563498 TMEM37Q8WXS4 190 aa12.81□□□□□ -0.36
NME3-204ENST00000563498 SAT2Q96F10 170 aaPredicted RBP12.81□□□□□ -0.36
NME3-204ENST00000563498 DMBT1Q9UGM3 2413 aaPredicted RBP12.8□□□□□ -0.36
NME3-204ENST00000563498 TRGV2A0A075B6R0 118 aa12.8□□□□□ -0.36
NME3-204ENST00000563498 EREGO14944 169 aa12.8□□□□□ -0.36
NME3-204ENST00000563498 COX7A2P2O60397 106 aa12.8□□□□□ -0.36
NME3-204ENST00000563498 NOL3O60936 208 aaKnown RBP12.8□□□□□ -0.36
NME3-204ENST00000563498 GUK1Q16774 197 aa12.8□□□□□ -0.36
NME3-204ENST00000563498 LINC00854A0A1B0GVQ3 168 aa12.79□□□□□ -0.36
NME3-204ENST00000563498 H3BQ15 152 aa12.79□□□□□ -0.36
NME3-204ENST00000563498 H3BTX0 84 aa12.79□□□□□ -0.36
NME3-204ENST00000563498 INAFM2P0DMQ5 153 aa12.79□□□□□ -0.36
NME3-204ENST00000563498 ERVFC1-1P60608 527 aa12.79□□□□□ -0.36
NME3-204ENST00000563498 OPCMLQ14982 345 aa12.79□□□□□ -0.36
NME3-204ENST00000563498 MORN5Q5VZ52 161 aa12.79□□□□□ -0.36
NME3-204ENST00000563498 C10orf113Q5VZT2 155 aa12.79□□□□□ -0.36
NME3-204ENST00000563498 C11orf72Q8NBR9 251 aa12.79□□□□□ -0.36
NME3-204ENST00000563498 FAM210AQ96ND0 272 aa12.79□□□□□ -0.36
NME3-204ENST00000563498 LINC00467Q9BRT7 94 aa12.79□□□□□ -0.36
NME3-204ENST00000563498 J3KRW8 73 aa12.78□□□□□ -0.36
NME3-204ENST00000563498 SLC25A5P05141 298 aaKnown RBP12.78□□□□□ -0.36
NME3-204ENST00000563498 MGST2Q99735 147 aa12.78□□□□□ -0.36
NME3-204ENST00000563498 GSN-AS1Q9NRJ2 163 aa12.78□□□□□ -0.36
NME3-204ENST00000563498 ZNF253O75346 499 aa12.77□□□□□ -0.37
NME3-204ENST00000563498 NDUFB6O95139 128 aa12.77□□□□□ -0.37
NME3-204ENST00000563498 XGP55808 180 aa12.77□□□□□ -0.37
NME3-204ENST00000563498 ARL16Q0P5N6 197 aa12.77□□□□□ -0.37
NME3-204ENST00000563498 DNAJC4Q9NNZ3 241 aa12.77□□□□□ -0.37
NME3-204ENST00000563498 RCL1Q9Y2P8 373 aaKnown RBP12.77□□□□□ -0.37
NME3-204ENST00000563498 SCGB1D2O95969 90 aa12.76□□□□□ -0.37
NME3-204ENST00000563498 OR4E1P0C645 316 aa12.76□□□□□ -0.37
NME3-204ENST00000563498 IAH1Q2TAA2 248 aaPredicted RBP12.76□□□□□ -0.37
NME3-204ENST00000563498 ANXA2RQ3ZCQ2 193 aa12.76□□□□□ -0.37
NME3-204ENST00000563498 NFE4Q86UQ8 179 aa12.76□□□□□ -0.37
NME3-204ENST00000563498 MRPL53Q96EL3 112 aaKnown RBP12.76□□□□□ -0.37
NME3-204ENST00000563498 FUT9Q9Y231 359 aa12.76□□□□□ -0.37
NME3-204ENST00000563498 TRGV1A0A0A0MS02 117 aa12.75□□□□□ -0.37
NME3-204ENST00000563498 C7orf71A4D174 169 aa12.75□□□□□ -0.37
NME3-204ENST00000563498 NAP1L6A6NFF2 107 aa12.75□□□□□ -0.37
NME3-204ENST00000563498 KLLNB2CW77 178 aa12.75□□□□□ -0.37
NME3-204ENST00000563498 SPINK4O60575 86 aa12.75□□□□□ -0.37
NME3-204ENST00000563498 ZNF324O75467 553 aaPredicted RBP12.75□□□□□ -0.37
NME3-204ENST00000563498 NXPH4O95158 308 aa12.75□□□□□ -0.37
NME3-204ENST00000563498 S100A5P33763 92 aa12.75□□□□□ -0.37
NME3-204ENST00000563498 RAB31Q13636 194 aa12.75□□□□□ -0.37
NME3-204ENST00000563498 Q6ZRG5 221 aa12.75□□□□□ -0.37
NME3-204ENST00000563498 EIF4E3Q8N5X7 224 aaKnown RBP12.75□□□□□ -0.37
NME3-204ENST00000563498 ICOSQ9Y6W8 199 aa12.75□□□□□ -0.37
NME3-204ENST00000563498 FAT1Q14517 4588 aa12.74□□□□□ -0.37
NME3-204ENST00000563498 C7orf66A4D0T2 115 aa12.74□□□□□ -0.37
NME3-204ENST00000563498 CAMLGP49069 296 aa12.74□□□□□ -0.37
NME3-204ENST00000563498 Q5VSD8 79 aa12.74□□□□□ -0.37
NME3-204ENST00000563498 OR1L4Q8NGR5 311 aa12.74□□□□□ -0.37
NME3-204ENST00000563498 FRZBQ92765 325 aa12.74□□□□□ -0.37
NME3-204ENST00000563498 ST6GAL2Q96JF0 529 aa12.74□□□□□ -0.37
NME3-204ENST00000563498 FAM19A4Q96LR4 140 aa12.74□□□□□ -0.37
NME3-204ENST00000563498 FLVCR2Q9UPI3 526 aa12.74□□□□□ -0.37
NME3-204ENST00000563498 PAX4O43316 350 aa12.73□□□□□ -0.37
NME3-204ENST00000563498 TCL1AP56279 114 aa12.73□□□□□ -0.37
NME3-204ENST00000563498 LINC00477Q96M19 166 aa12.73□□□□□ -0.37
NME3-204ENST00000563498 PFDN5Q99471 154 aa12.73□□□□□ -0.37
NME3-204ENST00000563498 GSKIPQ9P0R6 139 aa12.73□□□□□ -0.37
NME3-204ENST00000563498 TRAV5A0A0B4J249 113 aa12.72□□□□□ -0.37
NME3-204ENST00000563498 IFNA5P01569 189 aa12.72□□□□□ -0.37
NME3-204ENST00000563498 MBPP02686 304 aaPredicted RBP12.72□□□□□ -0.37
NME3-204ENST00000563498 FUSP35637 526 aaKnown RBP eCLIP12.72□□□□□ -0.37
NME3-204ENST00000563498 SLAQ13239 276 aa12.72□□□□□ -0.37
NME3-204ENST00000563498 IBA57Q5T440 356 aaKnown RBP12.72□□□□□ -0.37
NME3-204ENST00000563498 NRARPQ7Z6K4 114 aa12.72□□□□□ -0.37
NME3-204ENST00000563498 PRO0255Q9UI72 69 aa12.72□□□□□ -0.37
NME3-204ENST00000563498 KLF12Q9Y4X4 402 aa12.72□□□□□ -0.37
NME3-204ENST00000563498 TRBV19A0A075B6N1 114 aa12.71□□□□□ -0.37
NME3-204ENST00000563498 TRAV9-2A0A087WT02 112 aa12.71□□□□□ -0.37
NME3-204ENST00000563498 A0A087WTM6 91 aa12.71□□□□□ -0.37
NME3-204ENST00000563498 K7EP13 123 aa12.71□□□□□ -0.37
NME3-204ENST00000563498 NMBP08949 121 aa12.71□□□□□ -0.37
NME3-204ENST00000563498 CD300CQ08708 224 aa12.71□□□□□ -0.37
NME3-204ENST00000563498 MIC13Q5XKP0 118 aa12.71□□□□□ -0.37
NME3-204ENST00000563498 LYPD5Q6UWN5 251 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms