RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 LSM5Q9Y4Y9 91 aaKnown RBP4.8□□□□□ -1.64
CDH11-208ENST00000563492 TIMM8BQ9Y5J9 83 aaPredicted RBP4.8□□□□□ -1.64
CDH11-208ENST00000563492 TRAV6A0A075B6T7 132 aa4.79□□□□□ -1.64
CDH11-208ENST00000563492 NAP1L6A6NFF2 107 aa4.79□□□□□ -1.64
CDH11-208ENST00000563492 FNDC10F2Z333 226 aa4.79□□□□□ -1.64
CDH11-208ENST00000563492 H7BYZ3 331 aa4.79□□□□□ -1.64
CDH11-208ENST00000563492 M0R3E3 92 aa4.79□□□□□ -1.64
CDH11-208ENST00000563492 TSC22D2O75157 780 aa4.79□□□□□ -1.64
CDH11-208ENST00000563492 TAS2R30P59541 319 aa4.79□□□□□ -1.64
CDH11-208ENST00000563492 B2MP61769 119 aa4.79□□□□□ -1.64
CDH11-208ENST00000563492 ERCC8Q13216 396 aa4.79□□□□□ -1.64
CDH11-208ENST00000563492 ESRGQ1W209 222 aa4.79□□□□□ -1.64
CDH11-208ENST00000563492 GCSAMLQ5JQS6 135 aa4.79□□□□□ -1.64
CDH11-208ENST00000563492 C10orf113Q5VZT2 155 aa4.79□□□□□ -1.64
CDH11-208ENST00000563492 Q6ZTI0 123 aa4.79□□□□□ -1.64
CDH11-208ENST00000563492 NRARPQ7Z6K4 114 aa4.79□□□□□ -1.64
CDH11-208ENST00000563492 ZNF546Q86UE3 836 aa4.79□□□□□ -1.64
CDH11-208ENST00000563492 C6orf223Q8N319 242 aa4.79□□□□□ -1.64
CDH11-208ENST00000563492 LINC00612Q8N6U2 182 aa4.79□□□□□ -1.64
CDH11-208ENST00000563492 ZNF431Q8TF32 576 aaPredicted RBP4.79□□□□□ -1.64
CDH11-208ENST00000563492 C16orf74Q96GX8 76 aa4.79□□□□□ -1.64
CDH11-208ENST00000563492 ZNF586Q9NXT0 402 aa4.79□□□□□ -1.64
CDH11-208ENST00000563492 DNAH5Q8TE73 4624 aa4.78□□□□□ -1.64
CDH11-208ENST00000563492 IGSF23A1L1A6 192 aa4.78□□□□□ -1.64
CDH11-208ENST00000563492 C16orf90A8MZG2 172 aa4.78□□□□□ -1.64
CDH11-208ENST00000563492 ZNF701M0R085 212 aaPredicted RBP4.78□□□□□ -1.64
CDH11-208ENST00000563492 NDUFB4O95168 129 aa4.78□□□□□ -1.64
CDH11-208ENST00000563492 S100A7P31151 101 aa4.78□□□□□ -1.64
CDH11-208ENST00000563492 FUSP35637 526 aaKnown RBP eCLIP4.78□□□□□ -1.64
CDH11-208ENST00000563492 CAMLGP49069 296 aa4.78□□□□□ -1.64
CDH11-208ENST00000563492 BCAP31P51572 246 aa4.78□□□□□ -1.64
CDH11-208ENST00000563492 CAV2P51636 162 aa4.78□□□□□ -1.64
CDH11-208ENST00000563492 CCL18P55774 89 aa4.78□□□□□ -1.64
CDH11-208ENST00000563492 FAM3BP58499 235 aaPredicted RBP4.78□□□□□ -1.64
CDH11-208ENST00000563492 KRTAP10-2P60368 255 aa4.78□□□□□ -1.64
CDH11-208ENST00000563492 CD300CQ08708 224 aa4.78□□□□□ -1.64
CDH11-208ENST00000563492 CLINT1Q14677 625 aa4.78□□□□□ -1.64
CDH11-208ENST00000563492 LCN15Q6UWW0 184 aa4.78□□□□□ -1.64
CDH11-208ENST00000563492 ZNF493Q6ZR52 646 aa4.78□□□□□ -1.64
CDH11-208ENST00000563492 BPIFA4PQ86YQ2 179 aa4.78□□□□□ -1.64
CDH11-208ENST00000563492 TMEM256Q8N2U0 113 aa4.78□□□□□ -1.64
CDH11-208ENST00000563492 OR10J6PQ8NGY7 276 aa4.78□□□□□ -1.64
CDH11-208ENST00000563492 TMEM263Q8WUH6 116 aaKnown RBP4.78□□□□□ -1.64
CDH11-208ENST00000563492 GNPNAT1Q96EK6 184 aaPredicted RBP4.78□□□□□ -1.64
CDH11-208ENST00000563492 GGACTQ9BVM4 153 aa4.78□□□□□ -1.64
CDH11-208ENST00000563492 C20orf85Q9H1P6 137 aa4.78□□□□□ -1.64
CDH11-208ENST00000563492 Q9H8V8 135 aa4.78□□□□□ -1.64
CDH11-208ENST00000563492 DNAJC4Q9NNZ3 241 aa4.78□□□□□ -1.64
CDH11-208ENST00000563492 GSN-AS1Q9NRJ2 163 aa4.78□□□□□ -1.64
CDH11-208ENST00000563492 APOBP04114 4563 aaKnown RBP4.77□□□□□ -1.65
CDH11-208ENST00000563492 C5orf51A6NDU8 294 aa4.77□□□□□ -1.65
CDH11-208ENST00000563492 NPIPB6E9PJ23 425 aa4.77□□□□□ -1.65
CDH11-208ENST00000563492 L7N2F9 121 aa4.77□□□□□ -1.65
CDH11-208ENST00000563492 LYRM1O43325 122 aa4.77□□□□□ -1.65
CDH11-208ENST00000563492 TCRBP04435 133 aa4.77□□□□□ -1.65
CDH11-208ENST00000563492 PYYP10082 97 aa4.77□□□□□ -1.65
CDH11-208ENST00000563492 CXCL2P19875 107 aa4.77□□□□□ -1.65
CDH11-208ENST00000563492 M6PRP20645 277 aa4.77□□□□□ -1.65
CDH11-208ENST00000563492 VAMP2P63027 116 aa4.77□□□□□ -1.65
CDH11-208ENST00000563492 IL15RAQ13261 267 aa4.77□□□□□ -1.65
CDH11-208ENST00000563492 PXDC1Q5TGL8 231 aa4.77□□□□□ -1.65
CDH11-208ENST00000563492 MZT2BQ6NZ67 158 aa4.77□□□□□ -1.65
CDH11-208ENST00000563492 EXOC3-AS1Q8N2X6 119 aa4.77□□□□□ -1.65
CDH11-208ENST00000563492 RXFP4Q8TDU9 374 aa4.77□□□□□ -1.65
CDH11-208ENST00000563492 VSIG2Q96IQ7 327 aa4.77□□□□□ -1.65
CDH11-208ENST00000563492 SLC50A1Q9BRV3 221 aa4.77□□□□□ -1.65
CDH11-208ENST00000563492 AGPAT4-IT1Q9H0P7 198 aa4.77□□□□□ -1.65
CDH11-208ENST00000563492 TMPRSS5Q9H3S3 457 aa4.77□□□□□ -1.65
CDH11-208ENST00000563492 SLC39A9Q9NUM3 307 aa4.77□□□□□ -1.65
CDH11-208ENST00000563492 NUDT15Q9NV35 164 aa4.77□□□□□ -1.65
CDH11-208ENST00000563492 WDR83OSQ9Y284 106 aa4.77□□□□□ -1.65
CDH11-208ENST00000563492 KLF12Q9Y4X4 402 aa4.77□□□□□ -1.65
CDH11-208ENST00000563492 TNFRSF18Q9Y5U5 241 aa4.77□□□□□ -1.65
CDH11-208ENST00000563492 TRBV19A0A075B6N1 114 aa4.76□□□□□ -1.65
CDH11-208ENST00000563492 UBE2L5PA0A1B0GUS4 154 aa4.76□□□□□ -1.65
CDH11-208ENST00000563492 CENPXA8MT69 81 aa4.76□□□□□ -1.65
CDH11-208ENST00000563492 ZNF324O75467 553 aaPredicted RBP4.76□□□□□ -1.65
CDH11-208ENST00000563492 SIX6O95475 246 aa4.76□□□□□ -1.65
CDH11-208ENST00000563492 RLN2P04090 185 aa4.76□□□□□ -1.65
CDH11-208ENST00000563492 RNASE4P34096 147 aaKnown RBP4.76□□□□□ -1.65
CDH11-208ENST00000563492 S100A10P60903 97 aa4.76□□□□□ -1.65
CDH11-208ENST00000563492 BTN1A1Q13410 526 aa4.76□□□□□ -1.65
CDH11-208ENST00000563492 RAB32Q13637 225 aa4.76□□□□□ -1.65
CDH11-208ENST00000563492 ZNF846Q147U1 533 aa4.76□□□□□ -1.65
CDH11-208ENST00000563492 VWC2Q2TAL6 325 aa4.76□□□□□ -1.65
CDH11-208ENST00000563492 PRR9Q5T870 116 aa4.76□□□□□ -1.65
CDH11-208ENST00000563492 Q6ZRG5 221 aa4.76□□□□□ -1.65
CDH11-208ENST00000563492 SPATA12Q7Z6I5 190 aa4.76□□□□□ -1.65
CDH11-208ENST00000563492 CCDC28AQ8IWP9 274 aa4.76□□□□□ -1.65
CDH11-208ENST00000563492 C12orf45Q8N5I9 185 aaPredicted RBP4.76□□□□□ -1.65
CDH11-208ENST00000563492 TMEM252Q8N6L7 170 aa4.76□□□□□ -1.65
CDH11-208ENST00000563492 MAPKAPK5-AS1Q8N8E1 139 aa4.76□□□□□ -1.65
CDH11-208ENST00000563492 C11orf72Q8NBR9 251 aa4.76□□□□□ -1.65
CDH11-208ENST00000563492 BLNKQ8WV28 456 aa4.76□□□□□ -1.65
CDH11-208ENST00000563492 C2orf50Q96LR7 162 aa4.76□□□□□ -1.65
CDH11-208ENST00000563492 UQCC1Q9NVA1 299 aa4.76□□□□□ -1.65
CDH11-208ENST00000563492 TP53TG3Q9ULZ0 132 aa4.76□□□□□ -1.65
CDH11-208ENST00000563492 PXMP4Q9Y6I8 212 aa4.76□□□□□ -1.65
CDH11-208ENST00000563492 IGKV2-40A0A087WW87 121 aaPredicted RBP4.75□□□□□ -1.65
CDH11-208ENST00000563492 A0A096LPF7 62 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms