RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 SFRP2Q96HF1 295 aa7.42□□□□□ -1.22
UBFD1-202ENST00000563366 ZNF331Q9NQX6 463 aaPredicted RBP7.42□□□□□ -1.22
UBFD1-202ENST00000563366 OTOGQ6ZRI0 2925 aa7.42□□□□□ -1.22
UBFD1-202ENST00000563366 HIVEP2P31629 2446 aa7.42□□□□□ -1.22
UBFD1-202ENST00000563366 IGHV3OR16-8A0A075B7F1 116 aa7.41□□□□□ -1.22
UBFD1-202ENST00000563366 M0QZ24 198 aa7.41□□□□□ -1.22
UBFD1-202ENST00000563366 XP32Q5T750 250 aa7.41□□□□□ -1.22
UBFD1-202ENST00000563366 C10orf99Q6UWK7 81 aa7.41□□□□□ -1.22
UBFD1-202ENST00000563366 UNQ9165/PRO28630Q6UXU0 137 aa7.41□□□□□ -1.22
UBFD1-202ENST00000563366 BAGE2Q86Y30 109 aa7.41□□□□□ -1.22
UBFD1-202ENST00000563366 C1QL4Q86Z23 238 aa7.41□□□□□ -1.22
UBFD1-202ENST00000563366 EXOC3-AS1Q8N2X6 119 aa7.41□□□□□ -1.22
UBFD1-202ENST00000563366 GLMPQ8WWB7 406 aa7.41□□□□□ -1.22
UBFD1-202ENST00000563366 IGF2BP2-AS1Q96M15 143 aa7.41□□□□□ -1.22
UBFD1-202ENST00000563366 IMMP2LQ96T52 175 aa7.41□□□□□ -1.22
UBFD1-202ENST00000563366 SMR3AQ99954 134 aa7.41□□□□□ -1.22
UBFD1-202ENST00000563366 RPH3ALQ9UNE2 315 aa7.41□□□□□ -1.22
UBFD1-202ENST00000563366 ZFP30Q9Y2G7 519 aa7.41□□□□□ -1.22
UBFD1-202ENST00000563366 RBAKDNA6NC62 111 aa7.4□□□□□ -1.22
UBFD1-202ENST00000563366 DIRC3C9JPN6 131 aa7.4□□□□□ -1.22
UBFD1-202ENST00000563366 NPIPB6E9PJ23 425 aa7.4□□□□□ -1.22
UBFD1-202ENST00000563366 LINC01619G3V211 115 aa7.4□□□□□ -1.22
UBFD1-202ENST00000563366 H3BTX0 84 aa7.4□□□□□ -1.22
UBFD1-202ENST00000563366 SLC17A3O00476 420 aa7.4□□□□□ -1.22
UBFD1-202ENST00000563366 ISLRO14498 428 aa7.4□□□□□ -1.22
UBFD1-202ENST00000563366 ZNF207O43670 478 aaKnown RBP7.4□□□□□ -1.22
UBFD1-202ENST00000563366 SNRPCP09234 159 aaKnown RBP7.4□□□□□ -1.22
UBFD1-202ENST00000563366 GNG5P63218 68 aa7.4□□□□□ -1.22
UBFD1-202ENST00000563366 RPL19P84098 196 aaKnown RBP7.4□□□□□ -1.22
UBFD1-202ENST00000563366 PSG3Q16557 428 aa7.4□□□□□ -1.22
UBFD1-202ENST00000563366 KHDC1LQ5JSQ8 128 aa7.4□□□□□ -1.22
UBFD1-202ENST00000563366 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.4□□□□□ -1.22
UBFD1-202ENST00000563366 OR10G8Q8NGN5 311 aa7.4□□□□□ -1.22
UBFD1-202ENST00000563366 OCC1Q8TAD7 63 aa7.4□□□□□ -1.22
UBFD1-202ENST00000563366 DPF1Q92782 380 aa7.4□□□□□ -1.22
UBFD1-202ENST00000563366 SPATA25Q9BR10 227 aa7.4□□□□□ -1.22
UBFD1-202ENST00000563366 PEMTQ9UBM1 199 aa7.4□□□□□ -1.22
UBFD1-202ENST00000563366 SMPXQ9UHP9 88 aa7.4□□□□□ -1.22
UBFD1-202ENST00000563366 ACANP16112 2415 aa7.4□□□□□ -1.23
UBFD1-202ENST00000563366 SONP18583 2426 aaKnown RBP7.4□□□□□ -1.23
UBFD1-202ENST00000563366 TRAV9-1A0A075B6T8 112 aa7.39□□□□□ -1.23
UBFD1-202ENST00000563366 A0A1B0GUS0 222 aa7.39□□□□□ -1.23
UBFD1-202ENST00000563366 GCGP01275 180 aa7.39□□□□□ -1.23
UBFD1-202ENST00000563366 LTAP01374 205 aa7.39□□□□□ -1.23
UBFD1-202ENST00000563366 MGST1P10620 155 aaKnown RBP7.39□□□□□ -1.23
UBFD1-202ENST00000563366 HOXD3P31249 432 aaPredicted RBP7.39□□□□□ -1.23
UBFD1-202ENST00000563366 ERVFC1-1P60608 527 aa7.39□□□□□ -1.23
UBFD1-202ENST00000563366 FLI1Q01543 452 aaPredicted RBP7.39□□□□□ -1.23
UBFD1-202ENST00000563366 IBA57Q5T440 356 aaKnown RBP7.39□□□□□ -1.23
UBFD1-202ENST00000563366 GOLT1AQ6ZVE7 132 aa7.39□□□□□ -1.23
UBFD1-202ENST00000563366 FAM231DQ6ZW35 169 aa7.39□□□□□ -1.23
UBFD1-202ENST00000563366 Q86TA4 180 aa7.39□□□□□ -1.23
UBFD1-202ENST00000563366 KLHL30-AS1Q8NEE0 82 aa7.39□□□□□ -1.23
UBFD1-202ENST00000563366 LINC01006Q8NI28 216 aa7.39□□□□□ -1.23
UBFD1-202ENST00000563366 WIPF2Q8TF74 440 aaPredicted RBP7.39□□□□□ -1.23
UBFD1-202ENST00000563366 C17orf77Q96MU5 243 aa7.39□□□□□ -1.23
UBFD1-202ENST00000563366 NDFIP1Q9BT67 221 aa7.39□□□□□ -1.23
UBFD1-202ENST00000563366 RHPN1-AS1Q9BWJ2 59 aa7.39□□□□□ -1.23
UBFD1-202ENST00000563366 NRN1Q9NPD7 142 aa7.39□□□□□ -1.23
UBFD1-202ENST00000563366 OSTCQ9NRP0 149 aa7.39□□□□□ -1.23
UBFD1-202ENST00000563366 SMAD5-AS1Q9Y6J3 95 aa7.39□□□□□ -1.23
UBFD1-202ENST00000563366 IGHV4OR15-8A0A075B7B6 117 aa7.38□□□□□ -1.23
UBFD1-202ENST00000563366 A0A087WW49 117 aa7.38□□□□□ -1.23
UBFD1-202ENST00000563366 IGHV3-49A0A0A0MS15 119 aa7.38□□□□□ -1.23
UBFD1-202ENST00000563366 IGHV3-66A0A0C4DH42 116 aa7.38□□□□□ -1.23
UBFD1-202ENST00000563366 PGPEP1LA6NFU8 196 aa7.38□□□□□ -1.23
UBFD1-202ENST00000563366 INAFM1C9JVW0 142 aa7.38□□□□□ -1.23
UBFD1-202ENST00000563366 K7EN84 100 aa7.38□□□□□ -1.23
UBFD1-202ENST00000563366 CHEK1O14757 476 aa7.38□□□□□ -1.23
UBFD1-202ENST00000563366 CRLF1O75462 422 aa7.38□□□□□ -1.23
UBFD1-202ENST00000563366 APOHP02749 345 aaPredicted RBP7.38□□□□□ -1.23
UBFD1-202ENST00000563366 SAPCD1Q5SSQ6 148 aa7.38□□□□□ -1.23
UBFD1-202ENST00000563366 TMEM183AQ8IXX5 376 aa7.38□□□□□ -1.23
UBFD1-202ENST00000563366 MLST8Q9BVC4 326 aa7.38□□□□□ -1.23
UBFD1-202ENST00000563366 MLXQ9UH92 298 aa7.38□□□□□ -1.23
UBFD1-202ENST00000563366 TSSC4Q9Y5U2 329 aaPredicted RBP7.38□□□□□ -1.23
UBFD1-202ENST00000563366 TRBV24-1A0A075B6N3 115 aa7.37□□□□□ -1.23
UBFD1-202ENST00000563366 IGHV3OR16-13A0A075B7E8 117 aa7.37□□□□□ -1.23
UBFD1-202ENST00000563366 IGHV3-74A0A0B4J1X5 117 aa7.37□□□□□ -1.23
UBFD1-202ENST00000563366 TRAV34A0A0B4J273 112 aa7.37□□□□□ -1.23
UBFD1-202ENST00000563366 TMEM213A2RRL7 107 aa7.37□□□□□ -1.23
UBFD1-202ENST00000563366 COLCA2A8K830 154 aa7.37□□□□□ -1.23
UBFD1-202ENST00000563366 M0R3E3 92 aa7.37□□□□□ -1.23
UBFD1-202ENST00000563366 IGLV2-8P01709 118 aa7.37□□□□□ -1.23
UBFD1-202ENST00000563366 CT45A10P0DMU9 189 aa7.37□□□□□ -1.23
UBFD1-202ENST00000563366 FOLR2P14207 255 aa7.37□□□□□ -1.23
UBFD1-202ENST00000563366 ID1P41134 155 aa7.37□□□□□ -1.23
UBFD1-202ENST00000563366 FOXL1Q12952 345 aa7.37□□□□□ -1.23
UBFD1-202ENST00000563366 KLF5Q13887 457 aaPredicted RBP7.37□□□□□ -1.23
UBFD1-202ENST00000563366 ELOBQ15370 118 aa7.37□□□□□ -1.23
UBFD1-202ENST00000563366 LCN12Q6JVE5 192 aa7.37□□□□□ -1.23
UBFD1-202ENST00000563366 FAM24BQ8N5W8 94 aa7.37□□□□□ -1.23
UBFD1-202ENST00000563366 OR11H1Q8NG94 326 aa7.37□□□□□ -1.23
UBFD1-202ENST00000563366 OR1N2Q8NGR9 330 aa7.37□□□□□ -1.23
UBFD1-202ENST00000563366 DAZAP1Q96EP5 407 aaKnown RBP7.37□□□□□ -1.23
UBFD1-202ENST00000563366 LINC00479Q96M42 142 aa7.37□□□□□ -1.23
UBFD1-202ENST00000563366 ZNF492Q9P255 531 aa7.37□□□□□ -1.23
UBFD1-202ENST00000563366 PSG8Q9UQ74 426 aa7.37□□□□□ -1.23
UBFD1-202ENST00000563366 NOTCH2Q04721 2471 aa7.36□□□□□ -1.23
UBFD1-202ENST00000563366 C9orf118A6NHY6 69 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms