RNA–Protein interactions for RNA: ENST00000563253.5

NAE1-211, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 3

Gene NAE1, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-211ENST00000563253 CAV3P56539 151 aa-0.14□□□□□ -2.43
NAE1-211ENST00000563253 LSM6P62312 80 aaKnown RBP-0.14□□□□□ -2.43
NAE1-211ENST00000563253 NEDD8Q15843 81 aa-0.14□□□□□ -2.43
NAE1-211ENST00000563253 LIN52Q52LA3 116 aa-0.14□□□□□ -2.43
NAE1-211ENST00000563253 C10orf99Q6UWK7 81 aa-0.14□□□□□ -2.43
NAE1-211ENST00000563253 PATE2Q6UY27 113 aa-0.14□□□□□ -2.43
NAE1-211ENST00000563253 LINC00299Q6ZSB3 139 aa-0.14□□□□□ -2.43
NAE1-211ENST00000563253 GOLT1AQ6ZVE7 132 aa-0.14□□□□□ -2.43
NAE1-211ENST00000563253 C5orf17Q8NAS9 161 aa-0.14□□□□□ -2.43
NAE1-211ENST00000563253 OR8J2Q8NGG1 315 aa-0.14□□□□□ -2.43
NAE1-211ENST00000563253 PPTC7Q8NI37 304 aa-0.14□□□□□ -2.43
NAE1-211ENST00000563253 TEX37Q96LM6 180 aa-0.14□□□□□ -2.43
NAE1-211ENST00000563253 MAP1LC3BQ9GZQ8 125 aa-0.14□□□□□ -2.43
NAE1-211ENST00000563253 PARVBQ9HBI1 364 aa-0.14□□□□□ -2.43
NAE1-211ENST00000563253 ZFYVE9O95405 1425 aa-0.14□□□□□ -2.43
NAE1-211ENST00000563253 LOC285556D6RIA3 1793 aa-0.14□□□□□ -2.43
NAE1-211ENST00000563253 PDZD2O15018 2839 aa-0.14□□□□□ -2.43
NAE1-211ENST00000563253 CEP164Q9UPV0 1460 aa-0.15□□□□□ -2.43
NAE1-211ENST00000563253 NBEAL2Q6ZNJ1 2754 aa-0.15□□□□□ -2.43
NAE1-211ENST00000563253 FAM208BQ5VWN6 2430 aa-0.15□□□□□ -2.43
NAE1-211ENST00000563253 LRP2P98164 4655 aa-0.15□□□□□ -2.43
NAE1-211ENST00000563253 SCN8AQ9UQD0 1980 aa-0.15□□□□□ -2.43
NAE1-211ENST00000563253 LRP1Q07954 4544 aaKnown RBP-0.15□□□□□ -2.43
NAE1-211ENST00000563253 A0A1W2PRS3 328 aa-0.15□□□□□ -2.43
NAE1-211ENST00000563253 TMEM114B3SHH9 223 aa-0.15□□□□□ -2.43
NAE1-211ENST00000563253 LYRM1O43325 122 aa-0.15□□□□□ -2.43
NAE1-211ENST00000563253 HAND1O96004 215 aa-0.15□□□□□ -2.43
NAE1-211ENST00000563253 SERPINA1P01009 418 aa-0.15□□□□□ -2.43
NAE1-211ENST00000563253 IFNA4P05014 189 aa-0.15□□□□□ -2.43
NAE1-211ENST00000563253 IDO1P14902 403 aa-0.15□□□□□ -2.43
NAE1-211ENST00000563253 DIAPH2-AS1Q14236 149 aa-0.15□□□□□ -2.43
NAE1-211ENST00000563253 MSMO1Q15800 293 aa-0.15□□□□□ -2.43
NAE1-211ENST00000563253 ZNF56Q15929 161 aa-0.15□□□□□ -2.43
NAE1-211ENST00000563253 Q5BKY6 102 aa-0.15□□□□□ -2.43
NAE1-211ENST00000563253 FOXI2Q6ZQN5 318 aa-0.15□□□□□ -2.43
NAE1-211ENST00000563253 OR10X1Q8NGY0 326 aa-0.15□□□□□ -2.43
NAE1-211ENST00000563253 C9orf16Q9BUW7 83 aa-0.15□□□□□ -2.43
NAE1-211ENST00000563253 LPAR5Q9H1C0 372 aa-0.15□□□□□ -2.43
NAE1-211ENST00000563253 NAT8BQ9UHF3 227 aa-0.15□□□□□ -2.43
NAE1-211ENST00000563253 PLXND1Q9Y4D7 1925 aa-0.15□□□□□ -2.43
NAE1-211ENST00000563253 MYO18AQ92614 2054 aaKnown RBP-0.15□□□□□ -2.43
NAE1-211ENST00000563253 ACACBO00763 2458 aa-0.15□□□□□ -2.43
NAE1-211ENST00000563253 NIPSNAP2O75323 286 aa-0.16□□□□□ -2.44
NAE1-211ENST00000563253 MT-ND6P03923 174 aa-0.16□□□□□ -2.44
NAE1-211ENST00000563253 PDE6GP18545 87 aa-0.16□□□□□ -2.44
NAE1-211ENST00000563253 RPS3P23396 243 aaKnown RBP eCLIP-0.16□□□□□ -2.444e-6■■■■■ 40.5
NAE1-211ENST00000563253 INSL3P51460 131 aa-0.16□□□□□ -2.44
NAE1-211ENST00000563253 NCALDP61601 193 aa-0.16□□□□□ -2.44
NAE1-211ENST00000563253 SNCBQ16143 134 aa-0.16□□□□□ -2.44
NAE1-211ENST00000563253 SPINK13Q1W4C9 94 aa-0.16□□□□□ -2.44
NAE1-211ENST00000563253 GLYATL3Q5SZD4 288 aa-0.16□□□□□ -2.44
NAE1-211ENST00000563253 ZCCHC23Q6ZST2 131 aa-0.16□□□□□ -2.44
NAE1-211ENST00000563253 C10orf111Q8N326 155 aa-0.16□□□□□ -2.44
NAE1-211ENST00000563253 PLEKHB2Q96CS7 222 aa-0.16□□□□□ -2.44
NAE1-211ENST00000563253 DGCR14Q96DF8 476 aaKnown RBP-0.16□□□□□ -2.44
NAE1-211ENST00000563253 AP1S3Q96PC3 154 aa-0.16□□□□□ -2.44
NAE1-211ENST00000563253 PHB2Q99623 299 aa-0.16□□□□□ -2.44
NAE1-211ENST00000563253 OR2J1Q9GZK6 312 aa-0.16□□□□□ -2.44
NAE1-211ENST00000563253 CST11Q9H112 138 aa-0.16□□□□□ -2.44
NAE1-211ENST00000563253 SETXQ7Z333 2677 aaKnown RBP-0.16□□□□□ -2.44
NAE1-211ENST00000563253 ZANQ9Y493 2812 aa-0.16□□□□□ -2.44
NAE1-211ENST00000563253 CHD3Q12873 2000 aaKnown RBP-0.16□□□□□ -2.44
NAE1-211ENST00000563253 SIP14410 1827 aa-0.17□□□□□ -2.44
NAE1-211ENST00000563253 MYH10P35580 1976 aa-0.17□□□□□ -2.44
NAE1-211ENST00000563253 G3V2T6 193 aa-0.17□□□□□ -2.44
NAE1-211ENST00000563253 FXYD1O00168 92 aa-0.17□□□□□ -2.44
NAE1-211ENST00000563253 HIST1H2BKO60814 126 aa-0.17□□□□□ -2.44
NAE1-211ENST00000563253 NDUFC2O95298 119 aa-0.17□□□□□ -2.44
NAE1-211ENST00000563253 IFNA14P01570 189 aa-0.17□□□□□ -2.44
NAE1-211ENST00000563253 HIST1H2BJP06899 126 aa-0.17□□□□□ -2.44
NAE1-211ENST00000563253 CDKN2CP42773 168 aa-0.17□□□□□ -2.44
NAE1-211ENST00000563253 SNRPD3P62318 126 aaKnown RBP-0.17□□□□□ -2.44
NAE1-211ENST00000563253 ASB16-AS1Q495Z4 193 aa-0.17□□□□□ -2.44
NAE1-211ENST00000563253 XAF1Q6GPH4 301 aa-0.17□□□□□ -2.44
NAE1-211ENST00000563253 ANGPTL5Q86XS5 388 aa-0.17□□□□□ -2.44
NAE1-211ENST00000563253 FAM216BQ8N7L0 139 aa-0.17□□□□□ -2.44
NAE1-211ENST00000563253 MIA2Q96PC5 1412 aa-0.17□□□□□ -2.44
NAE1-211ENST00000563253 ADGRL3Q9HAR2 1447 aa-0.17□□□□□ -2.44
NAE1-211ENST00000563253 SRRM2Q9UQ35 2752 aaKnown RBP-0.17□□□□□ -2.44
NAE1-211ENST00000563253 FANCMQ8IYD8 2048 aa-0.18□□□□□ -2.44
NAE1-211ENST00000563253 ATP5HO75947 161 aa-0.18□□□□□ -2.44
NAE1-211ENST00000563253 IGHV3-33P01772 117 aa-0.18□□□□□ -2.44
NAE1-211ENST00000563253 TRGC2P03986 189 aa-0.18□□□□□ -2.44
NAE1-211ENST00000563253 FREM3P0C091 2139 aa-0.18□□□□□ -2.44
NAE1-211ENST00000563253 EVI2AP22794 236 aa-0.18□□□□□ -2.44
NAE1-211ENST00000563253 PHBP35232 272 aa-0.18□□□□□ -2.44
NAE1-211ENST00000563253 RPL37P61927 97 aaKnown RBP-0.18□□□□□ -2.44
NAE1-211ENST00000563253 GNG5P63218 68 aa-0.18□□□□□ -2.44
NAE1-211ENST00000563253 HACD4Q5VWC8 232 aa-0.18□□□□□ -2.44
NAE1-211ENST00000563253 CROCCP2Q86T23 111 aa-0.18□□□□□ -2.44
NAE1-211ENST00000563253 ZGRF1Q86YA3 2104 aa-0.18□□□□□ -2.44
NAE1-211ENST00000563253 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.18□□□□□ -2.44
NAE1-211ENST00000563253 GRPEL2Q8TAA5 225 aa-0.18□□□□□ -2.44
NAE1-211ENST00000563253 FAM213BQ8TBF2 198 aa-0.18□□□□□ -2.44
NAE1-211ENST00000563253 LINC00208Q96KT6 92 aa-0.18□□□□□ -2.44
NAE1-211ENST00000563253 PAIP2Q9BPZ3 127 aaKnown RBP-0.18□□□□□ -2.44
NAE1-211ENST00000563253 PROK2Q9HC23 129 aa-0.18□□□□□ -2.44
NAE1-211ENST00000563253 ARL2BPQ9Y2Y0 163 aa-0.18□□□□□ -2.44
NAE1-211ENST00000563253 TPRKBQ9Y3C4 175 aa-0.18□□□□□ -2.44
NAE1-211ENST00000563253 ZNF292O60281 2723 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms