RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 C8orf49Q96NF6 230 aa16.49■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 A0A1B0GUT8 65 aa16.48■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 AMTP48728 403 aa16.48■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 LCN12Q6JVE5 192 aa16.48■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.48■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 BORCS7Q96B45 105 aa16.48■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 RCHY1Q96PM5 261 aa16.48■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 PRR25Q96S07 402 aa16.48■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 NDFIP1Q9BT67 221 aa16.48■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 LINC00527Q9UJ94 153 aa16.48■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 U3KQE9 123 aa16.48■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 ZNF324O75467 553 aaPredicted RBP16.47■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 PRO1933Q9H354 126 aa16.47■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 RBAKDNA6NC62 111 aa16.46■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 IGHG4P01861 327 aa16.46■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 ARL3P36405 182 aa16.46■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 ASCL2Q99929 193 aa16.46■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 APOHP02749 345 aaPredicted RBP16.46■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 PPIFP30405 207 aaKnown RBP16.46■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 BMI1P35226 326 aa16.46■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 MRPL53Q96EL3 112 aaKnown RBP16.46■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 TMEM189A5PLL7 270 aa16.45■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 SH2D1AO60880 128 aa16.45■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 DDTP30046 118 aa16.45■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 RPS20P60866 119 aaKnown RBP16.45■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 ZNF664Q8N3J9 261 aa16.45■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 CLEC5AQ9NY25 188 aa16.45■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 EPG5Q9HCE0 2579 aa16.45■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 ZNF705FA8MVS1 300 aaPredicted RBP16.44■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 AVPP01185 164 aa16.44■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 ZNF705DP0CH99 300 aaPredicted RBP16.44■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 ZNF705BP0CI00 300 aaPredicted RBP16.44■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 PMCHP20382 165 aa16.44■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 DEFA6Q01524 100 aa16.44■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 GATD1Q8NB37 220 aa16.44■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 VGLL1Q99990 258 aa16.44■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 ZNF580Q9UK33 172 aa16.44■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.43■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 NDUFA4O00483 81 aa16.43■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 HLA-DMBP28068 263 aa16.43■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 IGFL4Q6B9Z1 124 aa16.43■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 NRN1Q9NPD7 142 aa16.43■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 A0A096LNT2 108 aa16.43■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 LOC102724200A0A096LPH7 203 aaPredicted RBP16.43■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 IGHV3-66A0A0C4DH42 116 aa16.43■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 PRB4P10163 310 aaPredicted RBP16.43■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 SRSF2Q01130 221 aaKnown RBP16.43■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 A0A0G2JLM5 398 aa16.42■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 HSBP1O75506 76 aa16.42■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 SRSF1Q07955 248 aaKnown RBP eCLIP16.42■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 ZNF207O43670 478 aaKnown RBP16.41■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 BLCAPP62952 87 aa16.41■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 A1L4Q6 167 aa16.41■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 ARMS2P0C7Q2 107 aa16.41■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 PF4V1P10720 104 aa16.41■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 LOXL1Q08397 574 aaPredicted RBP16.41■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 Q8TAT8 98 aa16.41■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 IGLV1-40P01703 118 aa16.4■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 KRTDAPP60985 99 aa16.4■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 DMRTA1Q5VZB9 504 aa16.4■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 RNASEKQ6P5S7 137 aaKnown RBP16.4■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 BEX4Q9NWD9 120 aaPredicted RBP16.4■□□□□ 0.22
VPS9D1-AS1-202ENST00000562866 IGHV3OR16-13A0A075B7E8 117 aa16.39■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 IGHV3-74A0A0B4J1X5 117 aa16.39■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 CYB5R2Q6BCY4 276 aa16.39■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 C8orf86Q6ZUL3 223 aa16.39■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 GLMPQ8WWB7 406 aa16.39■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 IGHV3-49A0A0A0MS15 119 aa16.38■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 NTF3P20783 257 aa16.38■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 TEX43Q6ZNM6 134 aa16.38■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 RNF182Q8N6D2 247 aa16.38■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 CHCHD1Q96BP2 118 aaKnown RBP16.38■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 SPTAN1Q13813 2472 aaKnown RBP16.38■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 TRAV8-2A0A0B4J237 113 aa16.38■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 FABP5P3A8MUU1 101 aa16.38■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 TGFAP01135 160 aa16.38■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 CD33P20138 364 aa16.38■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 FAM209BQ5JX69 171 aa16.38■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 REC114Q7Z4M0 266 aa16.38■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 NIT1Q86X76 327 aa16.38■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 TPPP3Q9BW30 176 aa16.38■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 USP9XQ93008 2570 aaPredicted RBP16.37■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 PRAC2D3DTV9 90 aa16.37■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 CFHR3Q02985 330 aa16.37■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 DEFB112Q30KQ8 113 aa16.37■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 C9orf139Q6ZV77 190 aa16.37■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 FAM19A2Q8N3H0 131 aa16.37■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 OR4X2Q8NGF9 303 aa16.37■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 TMSB15BA0A087X1C1 80 aa16.36■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 M0R2Z0 102 aa16.36■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 ERCC8Q13216 396 aa16.36■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 LYZL1Q6UWQ5 148 aa16.36■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 ZNF493Q6ZR52 646 aa16.36■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 KLK15Q9H2R5 256 aa16.36■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 KIR2DL5BA0A0G2JN68 375 aa16.36■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 KIR2DL5BA0A0G2JPC4 375 aa16.36■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 TRBV12-3P01733 135 aa16.36■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 RAB4AP20338 218 aa16.36■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 ZNF80P51504 273 aaPredicted RBP16.36■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 TMEM78Q5T7P6 136 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms