RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 HIST1H2BJP06899 126 aa0.15□□□□□ -2.39
DENND4A-205ENST00000562540 CCL4P13236 92 aa0.15□□□□□ -2.39
DENND4A-205ENST00000562540 MSMO1Q15800 293 aa0.15□□□□□ -2.39
DENND4A-205ENST00000562540 SNCBQ16143 134 aa0.15□□□□□ -2.39
DENND4A-205ENST00000562540 RMND5BQ96G75 393 aaPredicted RBP0.15□□□□□ -2.39
DENND4A-205ENST00000562540 GPX7Q96SL4 187 aaPredicted RBP0.15□□□□□ -2.39
DENND4A-205ENST00000562540 ASB4Q9Y574 426 aa0.15□□□□□ -2.39
DENND4A-205ENST00000562540 COL24A1Q17RW2 1714 aa0.15□□□□□ -2.39
DENND4A-205ENST00000562540 LOC285556D6RIA3 1793 aa0.14□□□□□ -2.39
DENND4A-205ENST00000562540 ODAMA1E959 279 aa0.14□□□□□ -2.39
DENND4A-205ENST00000562540 K7ERJ3 54 aa0.14□□□□□ -2.39
DENND4A-205ENST00000562540 ATG12O94817 140 aa0.14□□□□□ -2.39
DENND4A-205ENST00000562540 PPP1R2P41236 205 aa0.14□□□□□ -2.39
DENND4A-205ENST00000562540 CAPZBP47756 277 aa0.14□□□□□ -2.39
DENND4A-205ENST00000562540 HACD4Q5VWC8 232 aa0.14□□□□□ -2.39
DENND4A-205ENST00000562540 FOXI2Q6ZQN5 318 aa0.14□□□□□ -2.39
DENND4A-205ENST00000562540 LINC00299Q6ZSB3 139 aa0.14□□□□□ -2.39
DENND4A-205ENST00000562540 MALSU1Q96EH3 234 aa0.14□□□□□ -2.39
DENND4A-205ENST00000562540 CCL19Q99731 98 aa0.14□□□□□ -2.39
DENND4A-205ENST00000562540 PBDC1Q9BVG4 233 aa0.14□□□□□ -2.39
DENND4A-205ENST00000562540 SH3BGRL3Q9H299 93 aa0.14□□□□□ -2.39
DENND4A-205ENST00000562540 LYRM2Q9NU23 88 aaPredicted RBP0.14□□□□□ -2.39
DENND4A-205ENST00000562540 DSTQ03001 7570 aaKnown RBP0.14□□□□□ -2.39
DENND4A-205ENST00000562540 PCF11O94913 1555 aaKnown RBP0.14□□□□□ -2.39
DENND4A-205ENST00000562540 ZFYVE26Q68DK2 2539 aa0.14□□□□□ -2.39
DENND4A-205ENST00000562540 MYH3P11055 1940 aa0.13□□□□□ -2.39
DENND4A-205ENST00000562540 GPR31O00270 319 aa0.13□□□□□ -2.39
DENND4A-205ENST00000562540 IDO1P14902 403 aa0.13□□□□□ -2.39
DENND4A-205ENST00000562540 HBBP68871 147 aa0.13□□□□□ -2.39
DENND4A-205ENST00000562540 DIAPH2-AS1Q14236 149 aa0.13□□□□□ -2.39
DENND4A-205ENST00000562540 VMA21Q3ZAQ7 101 aa0.13□□□□□ -2.39
DENND4A-205ENST00000562540 SPINK6Q6UWN8 80 aa0.13□□□□□ -2.39
DENND4A-205ENST00000562540 FAM216BQ8N7L0 139 aa0.13□□□□□ -2.39
DENND4A-205ENST00000562540 CST11Q9H112 138 aa0.13□□□□□ -2.39
DENND4A-205ENST00000562540 N4BP2Q86UW6 1770 aaPredicted RBP0.13□□□□□ -2.39
DENND4A-205ENST00000562540 SPAG17Q6Q759 2223 aa0.13□□□□□ -2.39
DENND4A-205ENST00000562540 SSPOA2VEC9 5147 aa0.12□□□□□ -2.39
DENND4A-205ENST00000562540 A0A0J9YY99 117 aa0.12□□□□□ -2.39
DENND4A-205ENST00000562540 E2F6O75461 281 aa0.12□□□□□ -2.39
DENND4A-205ENST00000562540 ATP5HO75947 161 aa0.12□□□□□ -2.39
DENND4A-205ENST00000562540 QRFPP83859 136 aa0.12□□□□□ -2.39
DENND4A-205ENST00000562540 C1orf140Q5VVS0 124 aa0.12□□□□□ -2.39
DENND4A-205ENST00000562540 DHRS4L2Q6PKH6 230 aa0.12□□□□□ -2.39
DENND4A-205ENST00000562540 PXT1Q8NFP0 134 aa0.12□□□□□ -2.39
DENND4A-205ENST00000562540 MEGF8Q7Z7M0 2845 aa0.12□□□□□ -2.39
DENND4A-205ENST00000562540 UHRF1BP1Q6BDS2 1440 aa0.12□□□□□ -2.39
DENND4A-205ENST00000562540 CACNA1HO95180 2353 aa0.11□□□□□ -2.39
DENND4A-205ENST00000562540 ATG2AQ2TAZ0 1938 aa0.11□□□□□ -2.39
DENND4A-205ENST00000562540 ABCA1O95477 2261 aa0.11□□□□□ -2.39
DENND4A-205ENST00000562540 PDE6GP18545 87 aa0.11□□□□□ -2.39
DENND4A-205ENST00000562540 CASC2Q6XLA1 102 aa0.11□□□□□ -2.39
DENND4A-205ENST00000562540 PHF5AQ7RTV0 110 aaKnown RBP0.11□□□□□ -2.39
DENND4A-205ENST00000562540 CROCCP2Q86T23 111 aa0.11□□□□□ -2.39
DENND4A-205ENST00000562540 C10orf111Q8N326 155 aa0.11□□□□□ -2.39
DENND4A-205ENST00000562540 NUP35Q8NFH5 326 aa0.11□□□□□ -2.39
DENND4A-205ENST00000562540 OR13C6PQ8NH95 151 aa0.11□□□□□ -2.39
DENND4A-205ENST00000562540 GRPEL2Q8TAA5 225 aa0.11□□□□□ -2.39
DENND4A-205ENST00000562540 CHMP6Q96FZ7 201 aa0.11□□□□□ -2.39
DENND4A-205ENST00000562540 LIMD2Q9BT23 127 aa0.11□□□□□ -2.39
DENND4A-205ENST00000562540 TPRKBQ9Y3C4 175 aa0.11□□□□□ -2.39
DENND4A-205ENST00000562540 F8P00451 2351 aa0.11□□□□□ -2.39
DENND4A-205ENST00000562540 ERBINQ96RT1 1412 aa0.11□□□□□ -2.39
DENND4A-205ENST00000562540 ADGRL3Q9HAR2 1447 aa0.11□□□□□ -2.39
DENND4A-205ENST00000562540 SULT1C4O75897 302 aa0.1□□□□□ -2.39
DENND4A-205ENST00000562540 CST7O76096 145 aa0.1□□□□□ -2.39
DENND4A-205ENST00000562540 IFNA1P01562 189 aa0.1□□□□□ -2.39
DENND4A-205ENST00000562540 RPL35P42766 123 aaKnown RBP0.1□□□□□ -2.39
DENND4A-205ENST00000562540 RTL8BQ17RB0 113 aa0.1□□□□□ -2.39
DENND4A-205ENST00000562540 PRR15Q8IV56 129 aa0.1□□□□□ -2.39
DENND4A-205ENST00000562540 C5orf17Q8NAS9 161 aa0.1□□□□□ -2.39
DENND4A-205ENST00000562540 NEK7Q8TDX7 302 aa0.1□□□□□ -2.39
DENND4A-205ENST00000562540 EFCAB11Q9BUY7 163 aa0.1□□□□□ -2.39
DENND4A-205ENST00000562540 RTL8AQ9BWD3 113 aa0.1□□□□□ -2.39
DENND4A-205ENST00000562540 SS18L2Q9UHA2 77 aa0.1□□□□□ -2.39
DENND4A-205ENST00000562540 NAT8BQ9UHF3 227 aa0.1□□□□□ -2.39
DENND4A-205ENST00000562540 MT-ND6P03923 174 aa0.09□□□□□ -2.4
DENND4A-205ENST00000562540 RPL37AP61513 92 aaKnown RBP0.09□□□□□ -2.4
DENND4A-205ENST00000562540 ARF6P62330 175 aa0.09□□□□□ -2.4
DENND4A-205ENST00000562540 MRPS36P82909 103 aaKnown RBP0.09□□□□□ -2.4
DENND4A-205ENST00000562540 NEDD8Q15843 81 aa0.09□□□□□ -2.4
DENND4A-205ENST00000562540 LINC00269Q8N2A0 174 aa0.09□□□□□ -2.4
DENND4A-205ENST00000562540 OR4C12Q96R67 309 aa0.09□□□□□ -2.4
DENND4A-205ENST00000562540 OR2H1Q9GZK4 316 aa0.09□□□□□ -2.4
DENND4A-205ENST00000562540 ABCA12Q86UK0 2595 aa0.09□□□□□ -2.4
DENND4A-205ENST00000562540 TRPM7Q96QT4 1865 aa0.09□□□□□ -2.4
DENND4A-205ENST00000562540 ASXL3Q9C0F0 2248 aa0.09□□□□□ -2.4
DENND4A-205ENST00000562540 NCOR2Q9Y618 2525 aa0.09□□□□□ -2.4
DENND4A-205ENST00000562540 A6NN06 94 aa0.08□□□□□ -2.4
DENND4A-205ENST00000562540 H3BQV1 296 aa0.08□□□□□ -2.4
DENND4A-205ENST00000562540 IGHV3-30P01768 117 aa0.08□□□□□ -2.4
DENND4A-205ENST00000562540 IGHV3-30-5P0DP03 117 aa0.08□□□□□ -2.4
DENND4A-205ENST00000562540 CAV3P56539 151 aa0.08□□□□□ -2.4
DENND4A-205ENST00000562540 RPL19P84098 196 aaKnown RBP0.08□□□□□ -2.4
DENND4A-205ENST00000562540 FKBP1CQ5VVH2 108 aa0.08□□□□□ -2.4
DENND4A-205ENST00000562540 ZCCHC23Q6ZST2 131 aa0.08□□□□□ -2.4
DENND4A-205ENST00000562540 GINS3Q9BRX5 216 aa0.08□□□□□ -2.4
DENND4A-205ENST00000562540 LAMTOR3Q9UHA4 124 aa0.08□□□□□ -2.4
DENND4A-205ENST00000562540 OTOGQ6ZRI0 2925 aa0.07□□□□□ -2.4
DENND4A-205ENST00000562540 ESPL1Q14674 2120 aa0.07□□□□□ -2.4
DENND4A-205ENST00000562540 PIAS1O75925 651 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms