RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 IGKV1-9A0A0C4DH69 117 aa4.23□□□□□ -1.73
CAPN3-211ENST00000562199 C17orf112F2Z3M2 114 aa4.23□□□□□ -1.73
CAPN3-211ENST00000562199 H3BT86 120 aa4.23□□□□□ -1.73
CAPN3-211ENST00000562199 TIMM23O14925 209 aa4.23□□□□□ -1.73
CAPN3-211ENST00000562199 ZNF688P0C7X2 276 aa4.23□□□□□ -1.73
CAPN3-211ENST00000562199 IGKV1-13P0DP09 117 aa4.23□□□□□ -1.73
CAPN3-211ENST00000562199 GATA2P23769 480 aaPredicted RBP4.23□□□□□ -1.73
CAPN3-211ENST00000562199 WFDC2Q14508 124 aa4.23□□□□□ -1.73
CAPN3-211ENST00000562199 KISS1Q15726 138 aa4.23□□□□□ -1.73
CAPN3-211ENST00000562199 ETDBQ3ZM63 59 aa4.23□□□□□ -1.73
CAPN3-211ENST00000562199 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.23□□□□□ -1.73
CAPN3-211ENST00000562199 ATP1A1-AS1Q5TC04 95 aa4.23□□□□□ -1.73
CAPN3-211ENST00000562199 FAM19A3Q7Z5A8 133 aa4.23□□□□□ -1.73
CAPN3-211ENST00000562199 MKXQ8IYA7 352 aa4.23□□□□□ -1.73
CAPN3-211ENST00000562199 DRAM1Q8N682 238 aa4.23□□□□□ -1.73
CAPN3-211ENST00000562199 C3orf56Q8N813 242 aa4.23□□□□□ -1.73
CAPN3-211ENST00000562199 TMEM75Q8N9X5 138 aa4.23□□□□□ -1.73
CAPN3-211ENST00000562199 APCDD1LQ8NCL9 501 aa4.23□□□□□ -1.73
CAPN3-211ENST00000562199 DCANP1Q8TF63 244 aa4.23□□□□□ -1.73
CAPN3-211ENST00000562199 TMEM158Q8WZ71 300 aa4.23□□□□□ -1.73
CAPN3-211ENST00000562199 CYYR1Q96J86 154 aa4.23□□□□□ -1.73
CAPN3-211ENST00000562199 CALYQ9NYX4 217 aa4.23□□□□□ -1.73
CAPN3-211ENST00000562199 KLK5Q9Y337 293 aaPredicted RBP4.23□□□□□ -1.73
CAPN3-211ENST00000562199 MPDZO75970 2070 aa4.23□□□□□ -1.73
CAPN3-211ENST00000562199 ADAMTS9Q9P2N4 1935 aa4.23□□□□□ -1.73
CAPN3-211ENST00000562199 DOCK9Q9BZ29 2069 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 TRGV5A0A0B4J1U4 118 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 TRAV1-1A0A0B4J248 108 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 TRAV41A0A0B4J266 112 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 IGHV3OR16-9A0A0B4J2B5 98 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 RBMY1BA6NDE4 496 aaKnown RBP4.22□□□□□ -1.73
CAPN3-211ENST00000562199 RBMY1EA6NEQ0 496 aaKnown RBP4.22□□□□□ -1.73
CAPN3-211ENST00000562199 FAM24AA6NFZ4 105 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 UPK2O00526 184 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 ZNF253O75346 499 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 ZNF737O75373 536 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 RBMY1DP0C7P1 496 aaKnown RBP4.22□□□□□ -1.73
CAPN3-211ENST00000562199 RBMY1A1P0DJD3 496 aaKnown RBP4.22□□□□□ -1.73
CAPN3-211ENST00000562199 HLA-DRB4P13762 266 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 VDAC1P21796 283 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 CXCL5P42830 114 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 IGFBP7Q16270 282 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 ZC2HC1BQ5TFG8 222 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 LINC01545Q5VT33 79 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 Q6ZRM9 215 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 FOXL2NBQ6ZUU3 175 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 FAM57BQ71RH2 274 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 LYZL2Q7Z4W2 148 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 TEN1Q86WV5 123 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 BPIFA4PQ86YQ2 179 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 CLDND2Q8NHS1 167 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 LRRC29Q8WV35 223 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 RNF185Q96GF1 192 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 LYZL4Q96KX0 146 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 PLEKHA3Q9HB20 300 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 CTSZQ9UBR2 303 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 C19orf25Q9UFG5 118 aaPredicted RBP4.22□□□□□ -1.73
CAPN3-211ENST00000562199 LINC00527Q9UJ94 153 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 ZNF835Q9Y2P0 537 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 HLA-DRB4X5D2U9 266 aa4.22□□□□□ -1.73
CAPN3-211ENST00000562199 KIF26BQ2KJY2 2108 aa4.21□□□□□ -1.74
CAPN3-211ENST00000562199 TRGV11A0A075B6L2 103 aa4.21□□□□□ -1.74
CAPN3-211ENST00000562199 IGLV3-32A0A0A0MS00 114 aa4.21□□□□□ -1.74
CAPN3-211ENST00000562199 TRBV7-7A0A0K0K1E9 115 aa4.21□□□□□ -1.74
CAPN3-211ENST00000562199 SPTY2D1-AS1A0A0U1RR47 76 aa4.21□□□□□ -1.74
CAPN3-211ENST00000562199 KRTAP23-1A1A580 65 aa4.21□□□□□ -1.74
CAPN3-211ENST00000562199 A8MWL6 223 aa4.21□□□□□ -1.74
CAPN3-211ENST00000562199 KLLNB2CW77 178 aa4.21□□□□□ -1.74
CAPN3-211ENST00000562199 NXPH3O95157 252 aa4.21□□□□□ -1.74
CAPN3-211ENST00000562199 PSMB2P49721 201 aa4.21□□□□□ -1.74
CAPN3-211ENST00000562199 CCL20P78556 96 aa4.21□□□□□ -1.74
CAPN3-211ENST00000562199 PRR3P79522 188 aaKnown RBP4.21□□□□□ -1.74
CAPN3-211ENST00000562199 MPV17LQ2QL34 196 aa4.21□□□□□ -1.74
CAPN3-211ENST00000562199 NMSQ5H8A3 153 aa4.21□□□□□ -1.74
CAPN3-211ENST00000562199 C6orf201Q7Z4U5 140 aa4.21□□□□□ -1.74
CAPN3-211ENST00000562199 LINC00337Q8N6G1 96 aa4.21□□□□□ -1.74
CAPN3-211ENST00000562199 CYB561D1Q8N8Q1 229 aa4.21□□□□□ -1.74
CAPN3-211ENST00000562199 C11orf72Q8NBR9 251 aa4.21□□□□□ -1.74
CAPN3-211ENST00000562199 HDHD3Q9BSH5 251 aaPredicted RBP4.21□□□□□ -1.74
CAPN3-211ENST00000562199 PLEKHF2Q9H8W4 249 aa4.21□□□□□ -1.74
CAPN3-211ENST00000562199 ZNF286AQ9HBT8 521 aa4.21□□□□□ -1.74
CAPN3-211ENST00000562199 TNFRSF19Q9NS68 423 aa4.21□□□□□ -1.74
CAPN3-211ENST00000562199 SLC39A9Q9NUM3 307 aa4.21□□□□□ -1.74
CAPN3-211ENST00000562199 PRO0461Q9UI25 63 aa4.21□□□□□ -1.74
CAPN3-211ENST00000562199 EXPH5Q8NEV8 1989 aa4.2□□□□□ -1.74
CAPN3-211ENST00000562199 PRRC2BQ5JSZ5 2229 aaKnown RBP4.2□□□□□ -1.74
CAPN3-211ENST00000562199 TRAV9-1A0A075B6T8 112 aa4.2□□□□□ -1.74
CAPN3-211ENST00000562199 IGHV1OR21-1A0A087WYE8 117 aa4.2□□□□□ -1.74
CAPN3-211ENST00000562199 DPRXA6NFQ7 191 aa4.2□□□□□ -1.74
CAPN3-211ENST00000562199 M0R378 163 aa4.2□□□□□ -1.74
CAPN3-211ENST00000562199 M0R381 172 aa4.2□□□□□ -1.74
CAPN3-211ENST00000562199 LST1O00453 97 aa4.2□□□□□ -1.74
CAPN3-211ENST00000562199 UBE2L6O14933 153 aa4.2□□□□□ -1.74
CAPN3-211ENST00000562199 NDUFB3O43676 98 aa4.2□□□□□ -1.74
CAPN3-211ENST00000562199 SYNGR2O43760 224 aa4.2□□□□□ -1.74
CAPN3-211ENST00000562199 ZNF73O43830 326 aaPredicted RBP4.2□□□□□ -1.74
CAPN3-211ENST00000562199 SSSCA1O60232 199 aa4.2□□□□□ -1.74
CAPN3-211ENST00000562199 CST7O76096 145 aa4.2□□□□□ -1.74
CAPN3-211ENST00000562199 IGHV4-34P06331 123 aa4.2□□□□□ -1.74
CAPN3-211ENST00000562199 COX6A1P12074 109 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms