RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 IFNA21P01568 189 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 IFNA17P01571 189 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 TRBV12-3P01733 135 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 HLA-DQB1P01920 261 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 CD36P16671 472 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 MYL12AP19105 171 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 ARPC4P59998 168 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 HLA-DRB3P79483 266 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 TNXAQ16473 311 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 DEFB135Q30KP9 77 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 RPL39P5Q59GN2 51 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 RNASE13Q5GAN3 156 aaKnown RBP2.18□□□□□ -2.06
HERC1-215ENST00000561436 C1orf134Q5TEV5 83 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 SPATA24Q86W54 205 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 RNF182Q8N6D2 247 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 OR11H2Q8NH07 326 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 OR10J5Q8NHC4 309 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 TMEM167AQ8TBQ9 72 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 CASTOR1Q8WTX7 329 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 BORCS5Q969J3 196 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 OR2A7Q96R45 310 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 CIB1Q99828 191 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 PDCD1LG2Q9BQ51 273 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 SAMD10Q9BYL1 202 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 C8orf4Q9NR00 106 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 C8orf17Q9NRJ1 99 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 FLVCR2Q9UPI3 526 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 POMPQ9Y244 141 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 CBY1Q9Y3M2 126 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 AP4S1Q9Y587 144 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 PLXNB1O43157 2135 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 A0A1W2PPV4 95 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 TMEM14DPA8MWL7 114 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 C16orf90A8MZG2 172 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 FABP7O15540 132 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 ATP5HO75947 161 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 GCGP01275 180 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 IFNA10P01566 189 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 LIMS3P0CW19 117 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 LIMS4P0CW20 117 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 SPART-AS1P0CW21 52 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 DEFA4P12838 97 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 GNRHRP30968 328 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 RPL27AP46776 148 aaKnown RBP2.17□□□□□ -2.06
HERC1-215ENST00000561436 AP2S1P53680 142 aaPredicted RBP2.17□□□□□ -2.06
HERC1-215ENST00000561436 MRPS15P82914 257 aaKnown RBP2.17□□□□□ -2.06
HERC1-215ENST00000561436 CLEC19AQ6UXS0 136 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 Q8NAQ8 132 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 ACOT12Q8WYK0 555 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 CCDC124Q96CT7 223 aaKnown RBP2.17□□□□□ -2.06
HERC1-215ENST00000561436 DGCR14Q96DF8 476 aaKnown RBP2.17□□□□□ -2.06
HERC1-215ENST00000561436 DERL3Q96Q80 235 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 BCL7BQ9BQE9 202 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 FAAP24Q9BTP7 215 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 NAA50Q9GZZ1 169 aaKnown RBP2.17□□□□□ -2.06
HERC1-215ENST00000561436 DCSTAMPQ9H295 470 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 WFDC1Q9HC57 220 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 SDHAF2Q9NX18 166 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 BET1LQ9NYM9 111 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 SMPXQ9UHP9 88 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 CHTOPQ9Y3Y2 248 aaKnown RBP2.17□□□□□ -2.06
HERC1-215ENST00000561436 OR51B2Q9Y5P1 312 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 PUS1Q9Y606 427 aaKnown RBP eCLIP2.17□□□□□ -2.06
HERC1-215ENST00000561436 DOCK11Q5JSL3 2073 aa2.17□□□□□ -2.06
HERC1-215ENST00000561436 NUP214P35658 2090 aaPredicted RBP2.16□□□□□ -2.06
HERC1-215ENST00000561436 HUWE1Q7Z6Z7 4374 aaKnown RBP2.16□□□□□ -2.06
HERC1-215ENST00000561436 HERC1Q15751 4861 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 TRAV8-7A0A075B6U6 113 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 DEFB131BA0A096LNP1 70 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 TRAV14DV4A0A0A6YYC5 116 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 EFCAB10A6NFE3 127 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 PPP5D1E7EU14 171 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 TGOLN2O43493 480 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 CRYZL1O95825 349 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 STAG3L2P0CL84 134 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 SAA1P0DJI8 122 aaPredicted RBP2.16□□□□□ -2.06
HERC1-215ENST00000561436 HLA-GP17693 338 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 GADD45AP24522 165 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 PSMA1P25786 263 aaKnown RBP2.16□□□□□ -2.06
HERC1-215ENST00000561436 HLA-DMBP28068 263 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 HTR2CP28335 458 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 POLR2IP36954 125 aaKnown RBP2.16□□□□□ -2.06
HERC1-215ENST00000561436 EIF2B2P49770 351 aaKnown RBP2.16□□□□□ -2.06
HERC1-215ENST00000561436 TAS2R60P59551 318 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 RPS11P62280 158 aaKnown RBP eCLIP2.16□□□□□ -2.06
HERC1-215ENST00000561436 QRFPP83859 136 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 RPL18AQ02543 176 aaKnown RBP2.16□□□□□ -2.06
HERC1-215ENST00000561436 ST3GAL4Q11206 333 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 TRAM1Q15629 374 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 RBM48Q5RL73 367 aaKnown RBP2.16□□□□□ -2.06
HERC1-215ENST00000561436 SPATA31B1PQ5VZV4 182 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 UNQ9165/PRO28630Q6UXU0 137 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 C6orf201Q7Z4U5 140 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 ZNF645Q8N7E2 425 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 ZNF709Q8N972 641 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 C15orf53Q8NAA6 179 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 DRAXINQ8NBI3 349 aaPredicted RBP2.16□□□□□ -2.06
HERC1-215ENST00000561436 CIRBP-AS1Q8TBR5 109 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 MITD1Q8WV92 249 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 KCNS1Q96KK3 526 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms