RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 TRAV12-2A0A075B6T6 113 aa14.38□□□□□ -0.11
TSPAN3-210ENST00000561277 AMBPP02760 352 aa14.38□□□□□ -0.11
TSPAN3-210ENST00000561277 RAB2AP61019 212 aa14.38□□□□□ -0.11
TSPAN3-210ENST00000561277 ACOT6Q3I5F7 207 aaPredicted RBP14.38□□□□□ -0.11
TSPAN3-210ENST00000561277 C1orf158Q8N1D5 194 aa14.38□□□□□ -0.11
TSPAN3-210ENST00000561277 EXOC3-AS1Q8N2X6 119 aa14.38□□□□□ -0.11
TSPAN3-210ENST00000561277 RNF141Q8WVD5 230 aa14.38□□□□□ -0.11
TSPAN3-210ENST00000561277 IGF2BP2-AS1Q96M15 143 aa14.38□□□□□ -0.11
TSPAN3-210ENST00000561277 INSP01308 110 aa14.37□□□□□ -0.11
TSPAN3-210ENST00000561277 NBEAP1P0C6P0 100 aa14.37□□□□□ -0.11
TSPAN3-210ENST00000561277 M6PRP20645 277 aa14.37□□□□□ -0.11
TSPAN3-210ENST00000561277 UBE2L3P68036 154 aaKnown RBP14.37□□□□□ -0.11
TSPAN3-210ENST00000561277 FXYD5Q96DB9 178 aa14.37□□□□□ -0.11
TSPAN3-210ENST00000561277 TMEM208Q9BTX3 173 aa14.37□□□□□ -0.11
TSPAN3-210ENST00000561277 AAMDCQ9H7C9 122 aa14.37□□□□□ -0.11
TSPAN3-210ENST00000561277 ARPC5O15511 151 aa14.36□□□□□ -0.11
TSPAN3-210ENST00000561277 CRXO43186 299 aaPredicted RBP14.36□□□□□ -0.11
TSPAN3-210ENST00000561277 ATP6V0CP27449 155 aa14.36□□□□□ -0.11
TSPAN3-210ENST00000561277 TAS2R45P59539 299 aa14.36□□□□□ -0.11
TSPAN3-210ENST00000561277 KHDC3LQ587J8 217 aa14.36□□□□□ -0.11
TSPAN3-210ENST00000561277 FAM122CQ6P4D5 195 aa14.36□□□□□ -0.11
TSPAN3-210ENST00000561277 ZNF503Q96F45 646 aa14.36□□□□□ -0.11
TSPAN3-210ENST00000561277 NEU1Q99519 415 aa14.36□□□□□ -0.11
TSPAN3-210ENST00000561277 A0A1W2PPV4 95 aa14.35□□□□□ -0.11
TSPAN3-210ENST00000561277 NUPR2A6NF83 97 aa14.35□□□□□ -0.11
TSPAN3-210ENST00000561277 EMP1P54849 157 aa14.35□□□□□ -0.11
TSPAN3-210ENST00000561277 ICAM4Q14773 271 aa14.35□□□□□ -0.11
TSPAN3-210ENST00000561277 RPL7L1Q6DKI1 246 aaKnown RBP14.35□□□□□ -0.11
TSPAN3-210ENST00000561277 MRPL53Q96EL3 112 aaKnown RBP14.35□□□□□ -0.11
TSPAN3-210ENST00000561277 PHYHIPLQ96FC7 376 aa14.35□□□□□ -0.11
TSPAN3-210ENST00000561277 SH3BGRL3Q9H299 93 aa14.35□□□□□ -0.11
TSPAN3-210ENST00000561277 OR10G4Q8NGN3 311 aa14.34□□□□□ -0.11
TSPAN3-210ENST00000561277 OR10G9Q8NGN4 311 aa14.34□□□□□ -0.11
TSPAN3-210ENST00000561277 OR10G7Q8NGN6 311 aa14.34□□□□□ -0.11
TSPAN3-210ENST00000561277 PHLDA1Q8WV24 401 aaPredicted RBP14.34□□□□□ -0.11
TSPAN3-210ENST00000561277 CELA1Q9UNI1 258 aa14.34□□□□□ -0.11
TSPAN3-210ENST00000561277 PRELID1Q9Y255 219 aa14.34□□□□□ -0.11
TSPAN3-210ENST00000561277 BORCS7-ASMTA0A0B4J1R7 106 aa14.34□□□□□ -0.11
TSPAN3-210ENST00000561277 SMIM9A6NGZ8 99 aa14.34□□□□□ -0.11
TSPAN3-210ENST00000561277 HMGB3O15347 200 aaKnown RBP14.34□□□□□ -0.11
TSPAN3-210ENST00000561277 HBE1P02100 147 aa14.34□□□□□ -0.11
TSPAN3-210ENST00000561277 CDKN1BP46527 198 aa14.34□□□□□ -0.11
TSPAN3-210ENST00000561277 CEMP1Q6PRD7 247 aaPredicted RBP14.34□□□□□ -0.11
TSPAN3-210ENST00000561277 RPP25LQ8N5L8 163 aaKnown RBP14.34□□□□□ -0.11
TSPAN3-210ENST00000561277 PSMG3Q9BT73 122 aaPredicted RBP14.34□□□□□ -0.11
TSPAN3-210ENST00000561277 OR2G3Q8NGZ4 309 aa14.33□□□□□ -0.12
TSPAN3-210ENST00000561277 RYR3Q15413 4870 aa14.32□□□□□ -0.12
TSPAN3-210ENST00000561277 NPIPB6E9PJ23 425 aa14.32□□□□□ -0.12
TSPAN3-210ENST00000561277 ERCC8Q13216 396 aa14.32□□□□□ -0.12
TSPAN3-210ENST00000561277 RRN3P1Q2M238 152 aa14.32□□□□□ -0.12
TSPAN3-210ENST00000561277 LOC102723971A0A1B0GUV8 181 aa14.31□□□□□ -0.12
TSPAN3-210ENST00000561277 J3KRW8 73 aa14.31□□□□□ -0.12
TSPAN3-210ENST00000561277 CDC34P49427 236 aaPredicted RBP14.31□□□□□ -0.12
TSPAN3-210ENST00000561277 RANP62826 216 aaKnown RBP14.31□□□□□ -0.12
TSPAN3-210ENST00000561277 KIR3DS1Q14943 382 aa14.31□□□□□ -0.12
TSPAN3-210ENST00000561277 IGKV2-40A0A087WW87 121 aaPredicted RBP14.3□□□□□ -0.12
TSPAN3-210ENST00000561277 IGKV2D-40P01614 121 aaPredicted RBP14.3□□□□□ -0.12
TSPAN3-210ENST00000561277 PRM2P04554 102 aa14.3□□□□□ -0.12
TSPAN3-210ENST00000561277 CT45A10P0DMU9 189 aa14.3□□□□□ -0.12
TSPAN3-210ENST00000561277 TSPOP30536 169 aa14.3□□□□□ -0.12
TSPAN3-210ENST00000561277 ZNF767PQ75MW2 155 aa14.3□□□□□ -0.12
TSPAN3-210ENST00000561277 Q9H3A6 140 aa14.3□□□□□ -0.12
TSPAN3-210ENST00000561277 KLK5Q9Y337 293 aaPredicted RBP14.3□□□□□ -0.12
TSPAN3-210ENST00000561277 TMEM189A5PLL7 270 aa14.3□□□□□ -0.12
TSPAN3-210ENST00000561277 ZNF705GA8MUZ8 300 aaPredicted RBP14.3□□□□□ -0.12
TSPAN3-210ENST00000561277 SERF2P84101 59 aa14.3□□□□□ -0.12
TSPAN3-210ENST00000561277 PQLC2Q6ZP29 291 aa14.3□□□□□ -0.12
TSPAN3-210ENST00000561277 Q6ZTC4 211 aa14.3□□□□□ -0.12
TSPAN3-210ENST00000561277 GNPNAT1Q96EK6 184 aaPredicted RBP14.3□□□□□ -0.12
TSPAN3-210ENST00000561277 DYNC2H1Q8NCM8 4307 aaKnown RBP14.29□□□□□ -0.12
TSPAN3-210ENST00000561277 LCE6AA0A183 80 aa14.29□□□□□ -0.12
TSPAN3-210ENST00000561277 MBP02144 154 aa14.29□□□□□ -0.12
TSPAN3-210ENST00000561277 HTN1P15515 57 aa14.29□□□□□ -0.12
TSPAN3-210ENST00000561277 LINC01587Q99440 93 aa14.29□□□□□ -0.12
TSPAN3-210ENST00000561277 TAAR5O14804 337 aa14.28□□□□□ -0.12
TSPAN3-210ENST00000561277 JTBO76095 146 aa14.28□□□□□ -0.12
TSPAN3-210ENST00000561277 ARL14EPLP0DKL9 152 aa14.28□□□□□ -0.12
TSPAN3-210ENST00000561277 LEPP41159 167 aa14.28□□□□□ -0.12
TSPAN3-210ENST00000561277 GFI1BQ5VTD9 330 aa14.28□□□□□ -0.12
TSPAN3-210ENST00000561277 OR11H4Q8NGC9 324 aa14.28□□□□□ -0.12
TSPAN3-210ENST00000561277 YTHDF2Q9Y5A9 579 aaKnown RBP14.28□□□□□ -0.12
TSPAN3-210ENST00000561277 LYSTQ99698 3801 aa14.28□□□□□ -0.12
TSPAN3-210ENST00000561277 PLECQ15149 4684 aaKnown RBP14.27□□□□□ -0.12
TSPAN3-210ENST00000561277 LYPD1Q8N2G4 141 aa14.27□□□□□ -0.12
TSPAN3-210ENST00000561277 TMEM256Q8N2U0 113 aa14.27□□□□□ -0.12
TSPAN3-210ENST00000561277 RAB24Q969Q5 203 aa14.27□□□□□ -0.12
TSPAN3-210ENST00000561277 HYLS1Q96M11 299 aa14.27□□□□□ -0.12
TSPAN3-210ENST00000561277 ODF3Q96PU9 254 aa14.27□□□□□ -0.12
TSPAN3-210ENST00000561277 AGPAT4-IT1Q9H0P7 198 aa14.27□□□□□ -0.12
TSPAN3-210ENST00000561277 SACSQ9NZJ4 4579 aa14.27□□□□□ -0.13
TSPAN3-210ENST00000561277 SPART-AS1P0CW21 52 aa14.26□□□□□ -0.13
TSPAN3-210ENST00000561277 CSN1S1P47710 185 aa14.26□□□□□ -0.13
TSPAN3-210ENST00000561277 C12orf74Q32Q52 190 aa14.26□□□□□ -0.13
TSPAN3-210ENST00000561277 TMEM78Q5T7P6 136 aa14.26□□□□□ -0.13
TSPAN3-210ENST00000561277 FAM222AQ5U5X8 452 aa14.26□□□□□ -0.13
TSPAN3-210ENST00000561277 LINC00477Q96M19 166 aa14.26□□□□□ -0.13
TSPAN3-210ENST00000561277 VGLL1Q99990 258 aa14.26□□□□□ -0.13
TSPAN3-210ENST00000561277 CYTL1Q9NRR1 136 aa14.26□□□□□ -0.13
TSPAN3-210ENST00000561277 STAG3L2P0CL84 134 aa14.26□□□□□ -0.13
TSPAN3-210ENST00000561277 STAG3L3P0CL85 134 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms