RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 ANXA2RQ3ZCQ2 193 aa12.56□□□□□ -0.4
TPM1-226ENST00000560959 BPIFA4PQ86YQ2 179 aa12.56□□□□□ -0.4
TPM1-226ENST00000560959 ZBTB8BQ8NAP8 495 aaPredicted RBP12.56□□□□□ -0.4
TPM1-226ENST00000560959 NPVFQ9HCQ7 196 aa12.56□□□□□ -0.4
TPM1-226ENST00000560959 GSN-AS1Q9NRJ2 163 aa12.56□□□□□ -0.4
TPM1-226ENST00000560959 MSRB1Q9NZV6 116 aa12.56□□□□□ -0.4
TPM1-226ENST00000560959 PRO0255Q9UI72 69 aa12.56□□□□□ -0.4
TPM1-226ENST00000560959 FUT9Q9Y231 359 aa12.56□□□□□ -0.4
TPM1-226ENST00000560959 PXMP4Q9Y6I8 212 aa12.56□□□□□ -0.4
TPM1-226ENST00000560959 KRTAP29-1A8MX34 341 aaPredicted RBP12.55□□□□□ -0.4
TPM1-226ENST00000560959 SPINK4O60575 86 aa12.55□□□□□ -0.4
TPM1-226ENST00000560959 MRPL23Q16540 153 aaKnown RBP12.55□□□□□ -0.4
TPM1-226ENST00000560959 DIRAS2Q96HU8 199 aa12.55□□□□□ -0.4
TPM1-226ENST00000560959 RSL24D1Q9UHA3 163 aaKnown RBP12.55□□□□□ -0.4
TPM1-226ENST00000560959 TRGV1A0A0A0MS02 117 aa12.54□□□□□ -0.4
TPM1-226ENST00000560959 NPIPB6E9PJ23 425 aa12.54□□□□□ -0.4
TPM1-226ENST00000560959 H3BP45 60 aa12.54□□□□□ -0.4
TPM1-226ENST00000560959 SLC25A5P05141 298 aaKnown RBP12.54□□□□□ -0.4
TPM1-226ENST00000560959 ID3Q02535 119 aa12.54□□□□□ -0.4
TPM1-226ENST00000560959 TEPPQ6URK8 271 aa12.54□□□□□ -0.4
TPM1-226ENST00000560959 LINC00305Q7Z4B0 112 aa12.54□□□□□ -0.4
TPM1-226ENST00000560959 NTN5Q8WTR8 489 aaPredicted RBP12.54□□□□□ -0.4
TPM1-226ENST00000560959 SAT2Q96F10 170 aaPredicted RBP12.54□□□□□ -0.4
TPM1-226ENST00000560959 ST6GAL2Q96JF0 529 aa12.54□□□□□ -0.4
TPM1-226ENST00000560959 SERTAD4-AS1Q5TG53 156 aa12.53□□□□□ -0.4
TPM1-226ENST00000560959 NEGR1Q7Z3B1 354 aa12.53□□□□□ -0.4
TPM1-226ENST00000560959 LINC00854A0A1B0GVQ3 168 aa12.52□□□□□ -0.41
TPM1-226ENST00000560959 SFT2D2O95562 160 aa12.52□□□□□ -0.41
TPM1-226ENST00000560959 IGLC2P0DOY2 106 aa12.52□□□□□ -0.41
TPM1-226ENST00000560959 EVI2AP22794 236 aa12.52□□□□□ -0.41
TPM1-226ENST00000560959 VAMP1P23763 118 aa12.52□□□□□ -0.41
TPM1-226ENST00000560959 FAUP35544 74 aaKnown RBP12.52□□□□□ -0.41
TPM1-226ENST00000560959 CRYBA4P53673 196 aa12.52□□□□□ -0.41
TPM1-226ENST00000560959 TCL1AP56279 114 aa12.52□□□□□ -0.41
TPM1-226ENST00000560959 EIF4E3Q8N5X7 224 aaKnown RBP12.52□□□□□ -0.41
TPM1-226ENST00000560959 PSENENQ9NZ42 101 aa12.52□□□□□ -0.41
TPM1-226ENST00000560959 HHLA3Q9XRX5 114 aa12.52□□□□□ -0.41
TPM1-226ENST00000560959 J3KRW8 73 aa12.51□□□□□ -0.41
TPM1-226ENST00000560959 SLC17A3O00476 420 aa12.51□□□□□ -0.41
TPM1-226ENST00000560959 HOXB5P09067 269 aa12.51□□□□□ -0.41
TPM1-226ENST00000560959 POLR2GP62487 172 aaKnown RBP eCLIP12.51□□□□□ -0.41
TPM1-226ENST00000560959 GUK1Q16774 197 aa12.51□□□□□ -0.41
TPM1-226ENST00000560959 IBA57Q5T440 356 aaKnown RBP12.51□□□□□ -0.41
TPM1-226ENST00000560959 SMIM8Q96KF7 97 aa12.51□□□□□ -0.41
TPM1-226ENST00000560959 DNAH8Q96JB1 4490 aa12.5□□□□□ -0.41
TPM1-226ENST00000560959 IGLV5-52A0A0A0MRZ9 124 aa12.5□□□□□ -0.41
TPM1-226ENST00000560959 C7orf71A4D174 169 aa12.5□□□□□ -0.41
TPM1-226ENST00000560959 KLLNB2CW77 178 aa12.5□□□□□ -0.41
TPM1-226ENST00000560959 GOSR2O14653 212 aa12.5□□□□□ -0.41
TPM1-226ENST00000560959 C1QBP02746 253 aa12.5□□□□□ -0.41
TPM1-226ENST00000560959 SNRPCP09234 159 aaKnown RBP12.5□□□□□ -0.41
TPM1-226ENST00000560959 ZNF546Q86UE3 836 aa12.5□□□□□ -0.41
TPM1-226ENST00000560959 C10orf126Q8N4M7 172 aa12.5□□□□□ -0.41
TPM1-226ENST00000560959 VGLL1Q99990 258 aa12.5□□□□□ -0.41
TPM1-226ENST00000560959 SLC25A21Q9BQT8 299 aaPredicted RBP12.5□□□□□ -0.41
TPM1-226ENST00000560959 KLF12Q9Y4X4 402 aa12.5□□□□□ -0.41
TPM1-226ENST00000560959 PLA2G1BP04054 148 aaKnown RBP12.49□□□□□ -0.41
TPM1-226ENST00000560959 SLC38A11Q08AI6 406 aa12.49□□□□□ -0.41
TPM1-226ENST00000560959 FHL2Q14192 279 aa12.49□□□□□ -0.41
TPM1-226ENST00000560959 TMEM14EPQ6UXP3 125 aa12.49□□□□□ -0.41
TPM1-226ENST00000560959 OR10P1Q8NGE3 313 aa12.49□□□□□ -0.41
TPM1-226ENST00000560959 TMEM37Q8WXS4 190 aa12.49□□□□□ -0.41
TPM1-226ENST00000560959 MRPL53Q96EL3 112 aaKnown RBP12.49□□□□□ -0.41
TPM1-226ENST00000560959 FAM19A4Q96LR4 140 aa12.49□□□□□ -0.41
TPM1-226ENST00000560959 LINC00477Q96M19 166 aa12.49□□□□□ -0.41
TPM1-226ENST00000560959 SOSTQ9BQB4 213 aa12.49□□□□□ -0.41
TPM1-226ENST00000560959 MRPL32Q9BYC8 188 aaKnown RBP12.49□□□□□ -0.41
TPM1-226ENST00000560959 MGAT4CQ9UBM8 478 aa12.49□□□□□ -0.41
TPM1-226ENST00000560959 HMCN2Q8NDA2 5059 aa12.48□□□□□ -0.41
TPM1-226ENST00000560959 H3BQ15 152 aa12.48□□□□□ -0.41
TPM1-226ENST00000560959 PRAF2O60831 178 aa12.48□□□□□ -0.41
TPM1-226ENST00000560959 ZNF253O75346 499 aa12.48□□□□□ -0.41
TPM1-226ENST00000560959 RRAS2P62070 204 aaPredicted RBP12.48□□□□□ -0.41
TPM1-226ENST00000560959 HAMPP81172 84 aa12.48□□□□□ -0.41
TPM1-226ENST00000560959 PPP1R1AQ13522 171 aa12.48□□□□□ -0.41
TPM1-226ENST00000560959 GGACTQ9BVM4 153 aa12.48□□□□□ -0.41
TPM1-226ENST00000560959 CCDC59Q9P031 241 aaKnown RBP12.48□□□□□ -0.41
TPM1-226ENST00000560959 LRCOL1A6NCL2 159 aa12.47□□□□□ -0.41
TPM1-226ENST00000560959 AGPAT2O15120 278 aa12.47□□□□□ -0.41
TPM1-226ENST00000560959 COX7A2P2O60397 106 aa12.47□□□□□ -0.41
TPM1-226ENST00000560959 MPDU1O75352 247 aa12.47□□□□□ -0.41
TPM1-226ENST00000560959 NMBP08949 121 aa12.47□□□□□ -0.41
TPM1-226ENST00000560959 AP3S2P59780 193 aa12.47□□□□□ -0.41
TPM1-226ENST00000560959 WFDC10BQ8IUB3 73 aa12.47□□□□□ -0.41
TPM1-226ENST00000560959 IQCF2Q8IXL9 164 aa12.47□□□□□ -0.41
TPM1-226ENST00000560959 DEFB104AQ8WTQ1 72 aa12.47□□□□□ -0.41
TPM1-226ENST00000560959 UBR4Q5T4S7 5183 aa12.47□□□□□ -0.41
TPM1-226ENST00000560959 H3BTX0 84 aa12.46□□□□□ -0.41
TPM1-226ENST00000560959 OR4E1P0C645 316 aa12.46□□□□□ -0.41
TPM1-226ENST00000560959 METTL15P1P0C7V9 234 aa12.46□□□□□ -0.41
TPM1-226ENST00000560959 OPCMLQ14982 345 aa12.46□□□□□ -0.41
TPM1-226ENST00000560959 MORN5Q5VZ52 161 aa12.46□□□□□ -0.41
TPM1-226ENST00000560959 C10orf113Q5VZT2 155 aa12.46□□□□□ -0.41
TPM1-226ENST00000560959 SYT8Q8NBV8 401 aa12.46□□□□□ -0.41
TPM1-226ENST00000560959 DEDD2Q8WXF8 326 aa12.46□□□□□ -0.41
TPM1-226ENST00000560959 C8orf49Q96NF6 230 aa12.46□□□□□ -0.41
TPM1-226ENST00000560959 K7EQD1 137 aa12.45□□□□□ -0.42
TPM1-226ENST00000560959 CCNKO75909 580 aa12.45□□□□□ -0.42
TPM1-226ENST00000560959 IGHV3-53P01767 116 aa12.45□□□□□ -0.42
TPM1-226ENST00000560959 CRYGDP07320 174 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms