RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 OTORQ9NRC9 128 aa8.91□□□□□ -0.98
IRF9-211ENST00000560852 TRBV7-9A0A0J9YWB2 115 aa8.9□□□□□ -0.98
IRF9-211ENST00000560852 RBAKDNA6NC62 111 aa8.9□□□□□ -0.98
IRF9-211ENST00000560852 APOC4P55056 127 aa8.9□□□□□ -0.98
IRF9-211ENST00000560852 HAGHQ16775 308 aa8.9□□□□□ -0.98
IRF9-211ENST00000560852 EBLN2Q6P2I7 272 aa8.9□□□□□ -0.98
IRF9-211ENST00000560852 AMTNQ6UX39 209 aa8.9□□□□□ -0.98
IRF9-211ENST00000560852 RPUSD4Q96CM3 377 aaKnown RBP8.9□□□□□ -0.98
IRF9-211ENST00000560852 LINC00052Q96N35 136 aa8.9□□□□□ -0.98
IRF9-211ENST00000560852 ODF3Q96PU9 254 aa8.9□□□□□ -0.98
IRF9-211ENST00000560852 TCEAL7Q9BRU2 100 aa8.9□□□□□ -0.98
IRF9-211ENST00000560852 CSTL1Q9H114 145 aa8.9□□□□□ -0.98
IRF9-211ENST00000560852 AAMDCQ9H7C9 122 aa8.9□□□□□ -0.98
IRF9-211ENST00000560852 TP53TG1Q9Y2A0 90 aa8.9□□□□□ -0.98
IRF9-211ENST00000560852 BOLA1Q9Y3E2 137 aa8.9□□□□□ -0.98
IRF9-211ENST00000560852 MAP1LC3B2A6NCE7 125 aa8.89□□□□□ -0.99
IRF9-211ENST00000560852 NMBP08949 121 aa8.89□□□□□ -0.99
IRF9-211ENST00000560852 GIG44P09565 113 aaPredicted RBP8.89□□□□□ -0.99
IRF9-211ENST00000560852 H2AFB1P0C5Y9 115 aa8.89□□□□□ -0.99
IRF9-211ENST00000560852 PPT1P50897 306 aa8.89□□□□□ -0.99
IRF9-211ENST00000560852 ZNF124Q15973 351 aa8.89□□□□□ -0.99
IRF9-211ENST00000560852 GDF5OSQ5U4N7 250 aa8.89□□□□□ -0.99
IRF9-211ENST00000560852 C9orf47Q6ZRZ4 202 aa8.89□□□□□ -0.99
IRF9-211ENST00000560852 SBSPONQ8IVN8 264 aa8.89□□□□□ -0.99
IRF9-211ENST00000560852 STHQ8IWL8 128 aa8.89□□□□□ -0.99
IRF9-211ENST00000560852 RNF182Q8N6D2 247 aa8.89□□□□□ -0.99
IRF9-211ENST00000560852 LINC00477Q96M19 166 aa8.89□□□□□ -0.99
IRF9-211ENST00000560852 MAP1LC3BQ9GZQ8 125 aa8.89□□□□□ -0.99
IRF9-211ENST00000560852 Q9H3A6 140 aa8.89□□□□□ -0.99
IRF9-211ENST00000560852 SERTM2A0A1B0GWG4 89 aa8.88□□□□□ -0.99
IRF9-211ENST00000560852 NPIPB6E9PJ23 425 aa8.88□□□□□ -0.99
IRF9-211ENST00000560852 HMGB3O15347 200 aaKnown RBP8.88□□□□□ -0.99
IRF9-211ENST00000560852 HLA-DMBP28068 263 aa8.88□□□□□ -0.99
IRF9-211ENST00000560852 NUTF2P61970 127 aaKnown RBP8.88□□□□□ -0.99
IRF9-211ENST00000560852 RANP62826 216 aaKnown RBP8.88□□□□□ -0.99
IRF9-211ENST00000560852 ICAM4Q14773 271 aa8.88□□□□□ -0.99
IRF9-211ENST00000560852 ACTL10Q5JWF8 245 aa8.88□□□□□ -0.99
IRF9-211ENST00000560852 FAM74A1Q5RGS3 127 aa8.88□□□□□ -0.99
IRF9-211ENST00000560852 IGFL4Q6B9Z1 124 aa8.88□□□□□ -0.99
IRF9-211ENST00000560852 CCDC28AQ8IWP9 274 aa8.88□□□□□ -0.99
IRF9-211ENST00000560852 CSNK1G2-AS1Q8NCQ2 148 aa8.88□□□□□ -0.99
IRF9-211ENST00000560852 ZNF738Q8NE65 137 aa8.88□□□□□ -0.99
IRF9-211ENST00000560852 FAM213BQ8TBF2 198 aa8.88□□□□□ -0.99
IRF9-211ENST00000560852 SFT2D1Q8WV19 159 aa8.88□□□□□ -0.99
IRF9-211ENST00000560852 BLNKQ8WV28 456 aa8.88□□□□□ -0.99
IRF9-211ENST00000560852 FAM19A4Q96LR4 140 aa8.88□□□□□ -0.99
IRF9-211ENST00000560852 LENEPQ9Y5L5 61 aa8.88□□□□□ -0.99
IRF9-211ENST00000560852 PGPA6NDG6 321 aa8.87□□□□□ -0.99
IRF9-211ENST00000560852 FBLL1A6NHQ2 334 aaKnown RBP8.87□□□□□ -0.99
IRF9-211ENST00000560852 KNCNA6PVL3 124 aa8.87□□□□□ -0.99
IRF9-211ENST00000560852 TEX46H3BTG2 121 aa8.87□□□□□ -0.99
IRF9-211ENST00000560852 H3BTX0 84 aa8.87□□□□□ -0.99
IRF9-211ENST00000560852 BOLA2-SMG1P6H3BVE0 249 aa8.87□□□□□ -0.99
IRF9-211ENST00000560852 M0R3E3 92 aa8.87□□□□□ -0.99
IRF9-211ENST00000560852 HBE1P02100 147 aa8.87□□□□□ -0.99
IRF9-211ENST00000560852 AMBPP02760 352 aa8.87□□□□□ -0.99
IRF9-211ENST00000560852 SNRPCP09234 159 aaKnown RBP8.87□□□□□ -0.99
IRF9-211ENST00000560852 CNN1P51911 297 aaKnown RBP8.87□□□□□ -0.99
IRF9-211ENST00000560852 TEX261Q6UWH6 196 aa8.87□□□□□ -0.99
IRF9-211ENST00000560852 EXOC3-AS1Q8N2X6 119 aa8.87□□□□□ -0.99
IRF9-211ENST00000560852 TXNDC17Q9BRA2 123 aa8.87□□□□□ -0.99
IRF9-211ENST00000560852 C1QTNF4Q9BXJ3 329 aa8.87□□□□□ -0.99
IRF9-211ENST00000560852 FAM74A7A6NL05 159 aa8.86□□□□□ -0.99
IRF9-211ENST00000560852 ZNF705FA8MVS1 300 aaPredicted RBP8.86□□□□□ -0.99
IRF9-211ENST00000560852 DIRC3C9JPN6 131 aa8.86□□□□□ -0.99
IRF9-211ENST00000560852 PRAC2D3DTV9 90 aa8.86□□□□□ -0.99
IRF9-211ENST00000560852 F6UB75 175 aa8.86□□□□□ -0.99
IRF9-211ENST00000560852 NDUFS6O75380 124 aaKnown RBP8.86□□□□□ -0.99
IRF9-211ENST00000560852 EIF3GO75821 320 aaKnown RBP eCLIP8.86□□□□□ -0.99
IRF9-211ENST00000560852 TAGLN2P37802 199 aaKnown RBP8.86□□□□□ -0.99
IRF9-211ENST00000560852 BLOC1S1P78537 153 aa8.86□□□□□ -0.99
IRF9-211ENST00000560852 C5orf17Q8NAS9 161 aa8.86□□□□□ -0.99
IRF9-211ENST00000560852 OR10J6PQ8NGY7 276 aa8.86□□□□□ -0.99
IRF9-211ENST00000560852 RNF183Q96D59 192 aa8.86□□□□□ -0.99
IRF9-211ENST00000560852 HUWE1Q7Z6Z7 4374 aaKnown RBP8.85□□□□□ -0.99
IRF9-211ENST00000560852 GGTLC3B5MD39 225 aa8.85□□□□□ -0.99
IRF9-211ENST00000560852 CRISP2P16562 243 aa8.85□□□□□ -0.99
IRF9-211ENST00000560852 CSN1S1P47710 185 aa8.85□□□□□ -0.99
IRF9-211ENST00000560852 DEFB1P60022 68 aa8.85□□□□□ -0.99
IRF9-211ENST00000560852 AGPAT4-IT1Q9H0P7 198 aa8.85□□□□□ -0.99
IRF9-211ENST00000560852 TMPRSS5Q9H3S3 457 aa8.85□□□□□ -0.99
IRF9-211ENST00000560852 EPDR1Q9UM22 224 aa8.85□□□□□ -0.99
IRF9-211ENST00000560852 ZNF705EA8MWA4 302 aaPredicted RBP8.84□□□□□ -0.99
IRF9-211ENST00000560852 FGF8P55075 233 aaPredicted RBP8.84□□□□□ -0.99
IRF9-211ENST00000560852 SUMO1P63165 101 aaKnown RBP8.84□□□□□ -0.99
IRF9-211ENST00000560852 ALKAL2Q6UX46 152 aa8.84□□□□□ -0.99
IRF9-211ENST00000560852 ZNF680Q8NEM1 530 aa8.84□□□□□ -0.99
IRF9-211ENST00000560852 HIST1H2BAQ96A08 127 aa8.84□□□□□ -0.99
IRF9-211ENST00000560852 NEU1Q99519 415 aa8.84□□□□□ -0.99
IRF9-211ENST00000560852 C20orf144Q9BQM9 153 aa8.84□□□□□ -0.99
IRF9-211ENST00000560852 SPATA25Q9BR10 227 aa8.84□□□□□ -0.99
IRF9-211ENST00000560852 MANBALQ9NQG1 85 aa8.84□□□□□ -0.99
IRF9-211ENST00000560852 ZNF492Q9P255 531 aa8.84□□□□□ -0.99
IRF9-211ENST00000560852 KLF12Q9Y4X4 402 aa8.84□□□□□ -0.99
IRF9-211ENST00000560852 YTHDF2Q9Y5A9 579 aaKnown RBP8.84□□□□□ -0.99
IRF9-211ENST00000560852 TRBV6-1A0A0K0K1D8 114 aa8.83□□□□□ -1
IRF9-211ENST00000560852 KLLNB2CW77 178 aa8.83□□□□□ -1
IRF9-211ENST00000560852 CRXO43186 299 aaPredicted RBP8.83□□□□□ -1
IRF9-211ENST00000560852 TCRAP04437 139 aa8.83□□□□□ -1
IRF9-211ENST00000560852 CT45A10P0DMU9 189 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms