RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 GGACTQ9BVM4 153 aa12.22□□□□□ -0.45
TSPAN3-208ENST00000560514 FLVCR2Q9UPI3 526 aa12.22□□□□□ -0.45
TSPAN3-208ENST00000560514 H3BP45 60 aa12.21□□□□□ -0.45
TSPAN3-208ENST00000560514 GCSHP23434 173 aa12.21□□□□□ -0.45
TSPAN3-208ENST00000560514 C4orf46Q504U0 113 aa12.21□□□□□ -0.45
TSPAN3-208ENST00000560514 PXDC1Q5TGL8 231 aa12.21□□□□□ -0.45
TSPAN3-208ENST00000560514 OR10P1Q8NGE3 313 aa12.21□□□□□ -0.45
TSPAN3-208ENST00000560514 MITD1Q8WV92 249 aa12.21□□□□□ -0.45
TSPAN3-208ENST00000560514 SDHCQ99643 169 aaPredicted RBP12.21□□□□□ -0.45
TSPAN3-208ENST00000560514 C20orf144Q9BQM9 153 aa12.21□□□□□ -0.45
TSPAN3-208ENST00000560514 HIGD1AQ9Y241 93 aa12.21□□□□□ -0.45
TSPAN3-208ENST00000560514 A0A087WTM6 91 aa12.2□□□□□ -0.46
TSPAN3-208ENST00000560514 H3BRN7 92 aa12.2□□□□□ -0.46
TSPAN3-208ENST00000560514 TSC22D2O75157 780 aa12.2□□□□□ -0.46
TSPAN3-208ENST00000560514 TRAV9-2A0A087WT02 112 aa12.19□□□□□ -0.46
TSPAN3-208ENST00000560514 A0A096LPF7 62 aa12.19□□□□□ -0.46
TSPAN3-208ENST00000560514 SMCO3A2RU48 225 aa12.19□□□□□ -0.46
TSPAN3-208ENST00000560514 SSSCA1O60232 199 aa12.19□□□□□ -0.46
TSPAN3-208ENST00000560514 NXPH4O95158 308 aa12.19□□□□□ -0.46
TSPAN3-208ENST00000560514 DNAH10OSP0CZ25 163 aa12.19□□□□□ -0.46
TSPAN3-208ENST00000560514 ANXA7P20073 488 aaKnown RBP12.19□□□□□ -0.46
TSPAN3-208ENST00000560514 BTCP35070 178 aa12.19□□□□□ -0.46
TSPAN3-208ENST00000560514 PSG3Q16557 428 aa12.19□□□□□ -0.46
TSPAN3-208ENST00000560514 IAH1Q2TAA2 248 aaPredicted RBP12.19□□□□□ -0.46
TSPAN3-208ENST00000560514 TEPPQ6URK8 271 aa12.19□□□□□ -0.46
TSPAN3-208ENST00000560514 TMPRSS5Q9H3S3 457 aa12.19□□□□□ -0.46
TSPAN3-208ENST00000560514 NDUFA13Q9P0J0 144 aa12.19□□□□□ -0.46
TSPAN3-208ENST00000560514 TRGV2A0A075B6R0 118 aa12.18□□□□□ -0.46
TSPAN3-208ENST00000560514 A0A087X0K7 114 aa12.18□□□□□ -0.46
TSPAN3-208ENST00000560514 CXCL3P19876 107 aa12.18□□□□□ -0.46
TSPAN3-208ENST00000560514 MGAT4CQ9UBM8 478 aa12.18□□□□□ -0.46
TSPAN3-208ENST00000560514 TNFRSF18Q9Y5U5 241 aa12.18□□□□□ -0.46
TSPAN3-208ENST00000560514 OR5G3P0C626 314 aa12.17□□□□□ -0.46
TSPAN3-208ENST00000560514 LINC00869P0C866 280 aa12.17□□□□□ -0.46
TSPAN3-208ENST00000560514 IL7P13232 177 aa12.17□□□□□ -0.46
TSPAN3-208ENST00000560514 ZBTB8BQ8NAP8 495 aaPredicted RBP12.17□□□□□ -0.46
TSPAN3-208ENST00000560514 RPUSD4Q96CM3 377 aaKnown RBP12.17□□□□□ -0.46
TSPAN3-208ENST00000560514 GSKIPQ9P0R6 139 aa12.17□□□□□ -0.46
TSPAN3-208ENST00000560514 LINC00854A0A1B0GVQ3 168 aa12.16□□□□□ -0.46
TSPAN3-208ENST00000560514 METTL15P1P0C7V9 234 aa12.16□□□□□ -0.46
TSPAN3-208ENST00000560514 HAMPP81172 84 aa12.16□□□□□ -0.46
TSPAN3-208ENST00000560514 VSIG2Q96IQ7 327 aa12.16□□□□□ -0.46
TSPAN3-208ENST00000560514 C7orf66A4D0T2 115 aa12.15□□□□□ -0.46
TSPAN3-208ENST00000560514 PRB4P10163 310 aaPredicted RBP12.15□□□□□ -0.46
TSPAN3-208ENST00000560514 CXCL2P19875 107 aa12.15□□□□□ -0.46
TSPAN3-208ENST00000560514 RRAS2P62070 204 aaPredicted RBP12.15□□□□□ -0.46
TSPAN3-208ENST00000560514 PATE2Q6UY27 113 aa12.15□□□□□ -0.46
TSPAN3-208ENST00000560514 SYT8Q8NBV8 401 aa12.15□□□□□ -0.46
TSPAN3-208ENST00000560514 ARL6Q9H0F7 186 aa12.15□□□□□ -0.46
TSPAN3-208ENST00000560514 ICOSQ9Y6W8 199 aa12.15□□□□□ -0.46
TSPAN3-208ENST00000560514 GOSR2O14653 212 aa12.14□□□□□ -0.47
TSPAN3-208ENST00000560514 PLA2G10O15496 165 aa12.14□□□□□ -0.47
TSPAN3-208ENST00000560514 MBPP02686 304 aaPredicted RBP12.14□□□□□ -0.47
TSPAN3-208ENST00000560514 GFI1BQ5VTD9 330 aa12.14□□□□□ -0.47
TSPAN3-208ENST00000560514 Q6ZTI0 123 aa12.14□□□□□ -0.47
TSPAN3-208ENST00000560514 ZNF546Q86UE3 836 aa12.14□□□□□ -0.47
TSPAN3-208ENST00000560514 ARV1Q9H2C2 271 aa12.14□□□□□ -0.47
TSPAN3-208ENST00000560514 RCL1Q9Y2P8 373 aaKnown RBP12.14□□□□□ -0.47
TSPAN3-208ENST00000560514 J3KRW8 73 aa12.13□□□□□ -0.47
TSPAN3-208ENST00000560514 MRPS12O15235 138 aaKnown RBP12.13□□□□□ -0.47
TSPAN3-208ENST00000560514 LYRM1O43325 122 aa12.13□□□□□ -0.47
TSPAN3-208ENST00000560514 CCNKO75909 580 aa12.13□□□□□ -0.47
TSPAN3-208ENST00000560514 SCGB1D2O95969 90 aa12.13□□□□□ -0.47
TSPAN3-208ENST00000560514 DAZ2Q13117 558 aaKnown RBP12.13□□□□□ -0.47
TSPAN3-208ENST00000560514 RAB31Q13636 194 aa12.13□□□□□ -0.47
TSPAN3-208ENST00000560514 ZNF846Q147U1 533 aa12.13□□□□□ -0.47
TSPAN3-208ENST00000560514 KIR3DS1Q14943 382 aa12.13□□□□□ -0.47
TSPAN3-208ENST00000560514 TMEM70Q9BUB7 260 aa12.13□□□□□ -0.47
TSPAN3-208ENST00000560514 LY96Q9Y6Y9 160 aa12.13□□□□□ -0.47
TSPAN3-208ENST00000560514 IGLV5-52A0A0A0MRZ9 124 aa12.12□□□□□ -0.47
TSPAN3-208ENST00000560514 NPIPB6E9PJ23 425 aa12.12□□□□□ -0.47
TSPAN3-208ENST00000560514 AGPAT2O15120 278 aa12.12□□□□□ -0.47
TSPAN3-208ENST00000560514 PAX4O43316 350 aa12.12□□□□□ -0.47
TSPAN3-208ENST00000560514 TCRBP04435 133 aa12.12□□□□□ -0.47
TSPAN3-208ENST00000560514 SERTAD4-AS1Q5TG53 156 aa12.12□□□□□ -0.47
TSPAN3-208ENST00000560514 LINC00299Q6ZSB3 139 aa12.12□□□□□ -0.47
TSPAN3-208ENST00000560514 BPIFA4PQ86YQ2 179 aa12.12□□□□□ -0.47
TSPAN3-208ENST00000560514 PYGO2Q9BRQ0 406 aa12.12□□□□□ -0.47
TSPAN3-208ENST00000560514 PARD6GQ9BYG4 376 aaPredicted RBP12.12□□□□□ -0.47
TSPAN3-208ENST00000560514 C20orf85Q9H1P6 137 aa12.12□□□□□ -0.47
TSPAN3-208ENST00000560514 MSRB1Q9NZV6 116 aa12.12□□□□□ -0.47
TSPAN3-208ENST00000560514 L7N2F9 121 aa12.11□□□□□ -0.47
TSPAN3-208ENST00000560514 VAMP2P63027 116 aa12.11□□□□□ -0.47
TSPAN3-208ENST00000560514 SLC38A11Q08AI6 406 aa12.11□□□□□ -0.47
TSPAN3-208ENST00000560514 ARL16Q0P5N6 197 aa12.11□□□□□ -0.47
TSPAN3-208ENST00000560514 LCN15Q6UWW0 184 aa12.11□□□□□ -0.47
TSPAN3-208ENST00000560514 LINC00305Q7Z4B0 112 aa12.11□□□□□ -0.47
TSPAN3-208ENST00000560514 ZNF431Q8TF32 576 aaPredicted RBP12.11□□□□□ -0.47
TSPAN3-208ENST00000560514 SLC50A1Q9BRV3 221 aa12.11□□□□□ -0.47
TSPAN3-208ENST00000560514 TRGV1A0A0A0MS02 117 aa12.1□□□□□ -0.47
TSPAN3-208ENST00000560514 TRAV12-3A0A0B4J271 114 aa12.1□□□□□ -0.47
TSPAN3-208ENST00000560514 PLA2G1BP04054 148 aaKnown RBP12.1□□□□□ -0.47
TSPAN3-208ENST00000560514 Q6ZRG5 221 aa12.1□□□□□ -0.47
TSPAN3-208ENST00000560514 C2orf50Q96LR7 162 aa12.1□□□□□ -0.47
TSPAN3-208ENST00000560514 DNAJC4Q9NNZ3 241 aa12.1□□□□□ -0.47
TSPAN3-208ENST00000560514 ZNF331Q9NQX6 463 aaPredicted RBP12.1□□□□□ -0.47
TSPAN3-208ENST00000560514 FUT9Q9Y231 359 aa12.1□□□□□ -0.47
TSPAN3-208ENST00000560514 KRTAP29-1A8MX34 341 aaPredicted RBP12.09□□□□□ -0.47
TSPAN3-208ENST00000560514 K7EP13 123 aa12.09□□□□□ -0.47
TSPAN3-208ENST00000560514 EVI2AP22794 236 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms