RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 HSPB11Q9Y547 144 aa8.32□□□□□ -1.08
RABGGTA-216ENST00000560243 YTHDF2Q9Y5A9 579 aaKnown RBP8.32□□□□□ -1.08
RABGGTA-216ENST00000560243 TRBV19A0A075B6N1 114 aa8.31□□□□□ -1.08
RABGGTA-216ENST00000560243 DEFB131BA0A096LNP1 70 aa8.31□□□□□ -1.08
RABGGTA-216ENST00000560243 M0R3E3 92 aa8.31□□□□□ -1.08
RABGGTA-216ENST00000560243 NDUFB4O95168 129 aa8.31□□□□□ -1.08
RABGGTA-216ENST00000560243 AMBPP02760 352 aa8.31□□□□□ -1.08
RABGGTA-216ENST00000560243 SPART-AS1P0CW21 52 aa8.31□□□□□ -1.08
RABGGTA-216ENST00000560243 AZU1P20160 251 aa8.31□□□□□ -1.08
RABGGTA-216ENST00000560243 RPL12P30050 165 aaKnown RBP8.31□□□□□ -1.08
RABGGTA-216ENST00000560243 FCN2Q15485 313 aa8.31□□□□□ -1.08
RABGGTA-216ENST00000560243 RRN3P1Q2M238 152 aa8.31□□□□□ -1.08
RABGGTA-216ENST00000560243 RPP25LQ8N5L8 163 aaKnown RBP8.31□□□□□ -1.08
RABGGTA-216ENST00000560243 ATP5SQ99766 215 aa8.31□□□□□ -1.08
RABGGTA-216ENST00000560243 SLC25A2Q9BXI2 301 aa8.31□□□□□ -1.08
RABGGTA-216ENST00000560243 WFDC1Q9HC57 220 aa8.31□□□□□ -1.08
RABGGTA-216ENST00000560243 TMEM14CQ9P0S9 112 aa8.31□□□□□ -1.08
RABGGTA-216ENST00000560243 DNAH6Q9C0G6 4158 aa8.3□□□□□ -1.08
RABGGTA-216ENST00000560243 IGHV4-4A0A075B6R2 117 aa8.3□□□□□ -1.08
RABGGTA-216ENST00000560243 TMEM189A5PLL7 270 aa8.3□□□□□ -1.08
RABGGTA-216ENST00000560243 PET100P0DJ07 73 aa8.3□□□□□ -1.08
RABGGTA-216ENST00000560243 HIST1H1EP10412 219 aaKnown RBP8.3□□□□□ -1.08
RABGGTA-216ENST00000560243 GUK1Q16774 197 aa8.3□□□□□ -1.08
RABGGTA-216ENST00000560243 LGALS9CQ6DKI2 356 aa8.3□□□□□ -1.08
RABGGTA-216ENST00000560243 BLNKQ8WV28 456 aa8.3□□□□□ -1.08
RABGGTA-216ENST00000560243 PPP1R14DQ9NXH3 145 aa8.3□□□□□ -1.08
RABGGTA-216ENST00000560243 FRAS1Q86XX4 4008 aa8.3□□□□□ -1.08
RABGGTA-216ENST00000560243 EIF3GO75821 320 aaKnown RBP eCLIP8.29□□□□□ -1.08
RABGGTA-216ENST00000560243 CT45A10P0DMU9 189 aa8.29□□□□□ -1.08
RABGGTA-216ENST00000560243 EXOC3-AS1Q8N2X6 119 aa8.29□□□□□ -1.08
RABGGTA-216ENST00000560243 OR10J6PQ8NGY7 276 aa8.29□□□□□ -1.08
RABGGTA-216ENST00000560243 NIPSNAP3BQ9BS92 247 aa8.29□□□□□ -1.08
RABGGTA-216ENST00000560243 PLAC8L1A1L4L8 177 aa8.28□□□□□ -1.08
RABGGTA-216ENST00000560243 NPIPB6E9PJ23 425 aa8.28□□□□□ -1.08
RABGGTA-216ENST00000560243 J3KRW8 73 aa8.28□□□□□ -1.08
RABGGTA-216ENST00000560243 ZNF253O75346 499 aa8.28□□□□□ -1.08
RABGGTA-216ENST00000560243 OR10J4P0C629 311 aa8.28□□□□□ -1.08
RABGGTA-216ENST00000560243 CDKN1BP46527 198 aa8.28□□□□□ -1.08
RABGGTA-216ENST00000560243 ERCC8Q13216 396 aa8.28□□□□□ -1.08
RABGGTA-216ENST00000560243 Q5BKY6 102 aa8.28□□□□□ -1.08
RABGGTA-216ENST00000560243 FFAR4Q5NUL3 377 aa8.28□□□□□ -1.08
RABGGTA-216ENST00000560243 GFI1BQ5VTD9 330 aa8.28□□□□□ -1.08
RABGGTA-216ENST00000560243 FXYD5Q96DB9 178 aa8.28□□□□□ -1.08
RABGGTA-216ENST00000560243 LINC01587Q99440 93 aa8.28□□□□□ -1.08
RABGGTA-216ENST00000560243 MED28Q9H204 178 aa8.28□□□□□ -1.08
RABGGTA-216ENST00000560243 TIMM9Q9Y5J7 89 aa8.28□□□□□ -1.08
RABGGTA-216ENST00000560243 DNAH10Q8IVF4 4471 aa8.27□□□□□ -1.08
RABGGTA-216ENST00000560243 C17orf112F2Z3M2 114 aa8.27□□□□□ -1.09
RABGGTA-216ENST00000560243 IFNA5P01569 189 aa8.27□□□□□ -1.09
RABGGTA-216ENST00000560243 NBEAP1P0C6P0 100 aa8.27□□□□□ -1.09
RABGGTA-216ENST00000560243 HTN1P15515 57 aa8.27□□□□□ -1.09
RABGGTA-216ENST00000560243 HTN3P15516 51 aa8.27□□□□□ -1.09
RABGGTA-216ENST00000560243 TCTAP57738 103 aa8.27□□□□□ -1.09
RABGGTA-216ENST00000560243 ICAM4Q14773 271 aa8.27□□□□□ -1.09
RABGGTA-216ENST00000560243 ZNF503Q96F45 646 aa8.27□□□□□ -1.09
RABGGTA-216ENST00000560243 OR51M1Q9H341 326 aa8.27□□□□□ -1.09
RABGGTA-216ENST00000560243 KCNIP2Q9NS61 270 aa8.27□□□□□ -1.09
RABGGTA-216ENST00000560243 FUT9Q9Y231 359 aa8.27□□□□□ -1.09
RABGGTA-216ENST00000560243 BIRC6Q9NR09 4857 aa8.27□□□□□ -1.09
RABGGTA-216ENST00000560243 TSPOP30536 169 aa8.26□□□□□ -1.09
RABGGTA-216ENST00000560243 TAS2R60P59551 318 aa8.26□□□□□ -1.09
RABGGTA-216ENST00000560243 PDE6HQ13956 83 aa8.26□□□□□ -1.09
RABGGTA-216ENST00000560243 FAM122CQ6P4D5 195 aa8.26□□□□□ -1.09
RABGGTA-216ENST00000560243 TMEM256Q8N2U0 113 aa8.26□□□□□ -1.09
RABGGTA-216ENST00000560243 SCGB1C1Q8TD33 95 aa8.26□□□□□ -1.09
RABGGTA-216ENST00000560243 RNF141Q8WVD5 230 aa8.26□□□□□ -1.09
RABGGTA-216ENST00000560243 MRPL53Q96EL3 112 aaKnown RBP8.26□□□□□ -1.09
RABGGTA-216ENST00000560243 PHYHIPLQ96FC7 376 aa8.26□□□□□ -1.09
RABGGTA-216ENST00000560243 PAXXQ9BUH6 204 aa8.26□□□□□ -1.09
RABGGTA-216ENST00000560243 MRPL32Q9BYC8 188 aaKnown RBP8.26□□□□□ -1.09
RABGGTA-216ENST00000560243 IGKV2-40A0A087WW87 121 aaPredicted RBP8.25□□□□□ -1.09
RABGGTA-216ENST00000560243 TRAV12-3A0A0B4J271 114 aa8.25□□□□□ -1.09
RABGGTA-216ENST00000560243 TEX48A0A1B0GUV7 120 aa8.25□□□□□ -1.09
RABGGTA-216ENST00000560243 OR7C2O60412 319 aa8.25□□□□□ -1.09
RABGGTA-216ENST00000560243 IGKV2D-40P01614 121 aaPredicted RBP8.25□□□□□ -1.09
RABGGTA-216ENST00000560243 DEFB130BP0DP73 79 aa8.25□□□□□ -1.09
RABGGTA-216ENST00000560243 DEFB130AP0DP74 79 aa8.25□□□□□ -1.09
RABGGTA-216ENST00000560243 DAD1P61803 113 aa8.25□□□□□ -1.09
RABGGTA-216ENST00000560243 AGPAT4-IT1Q9H0P7 198 aa8.25□□□□□ -1.09
RABGGTA-216ENST00000560243 PRELID1Q9Y255 219 aa8.25□□□□□ -1.09
RABGGTA-216ENST00000560243 LEPP41159 167 aa8.24□□□□□ -1.09
RABGGTA-216ENST00000560243 RAB2AP61019 212 aa8.24□□□□□ -1.09
RABGGTA-216ENST00000560243 OXA1LQ15070 435 aa8.24□□□□□ -1.09
RABGGTA-216ENST00000560243 RNASE8Q8TDE3 154 aaKnown RBP8.24□□□□□ -1.09
RABGGTA-216ENST00000560243 ODF3Q96PU9 254 aa8.24□□□□□ -1.09
RABGGTA-216ENST00000560243 VGLL1Q99990 258 aa8.24□□□□□ -1.09
RABGGTA-216ENST00000560243 NDUFAF3Q9BU61 184 aa8.24□□□□□ -1.09
RABGGTA-216ENST00000560243 AAMDCQ9H7C9 122 aa8.24□□□□□ -1.09
RABGGTA-216ENST00000560243 LYRM9A8MSI8 78 aa8.23□□□□□ -1.09
RABGGTA-216ENST00000560243 H7BYZ3 331 aa8.23□□□□□ -1.09
RABGGTA-216ENST00000560243 GIPP09681 153 aaPredicted RBP8.23□□□□□ -1.09
RABGGTA-216ENST00000560243 RANP62826 216 aaKnown RBP8.23□□□□□ -1.09
RABGGTA-216ENST00000560243 UBE2L3P68036 154 aaKnown RBP8.23□□□□□ -1.09
RABGGTA-216ENST00000560243 CD300CQ08708 224 aa8.23□□□□□ -1.09
RABGGTA-216ENST00000560243 RGS21Q2M5E4 152 aa8.23□□□□□ -1.09
RABGGTA-216ENST00000560243 Q6ZQT7 251 aa8.23□□□□□ -1.09
RABGGTA-216ENST00000560243 C9orf47Q6ZRZ4 202 aa8.23□□□□□ -1.09
RABGGTA-216ENST00000560243 FAM19A4Q96LR4 140 aa8.23□□□□□ -1.09
RABGGTA-216ENST00000560243 AQP10Q96PS8 301 aa8.23□□□□□ -1.09
RABGGTA-216ENST00000560243 C20orf144Q9BQM9 153 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms