RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 AKR1C1Q04828 323 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 RELQ04864 619 aaPredicted RBP4.19□□□□□ -1.74
USP3-215ENST00000559771 VWC2Q2TAL6 325 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 FAM74A3Q4VXF1 159 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 SPINK9Q5DT21 86 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 LEMD1Q68G75 181 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 TMEM182Q6ZP80 229 aaPredicted RBP4.19□□□□□ -1.74
USP3-215ENST00000559771 Q6ZRM9 215 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 TCF24Q7RTU0 167 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 H2BFWTQ7Z2G1 175 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 TRPT1Q86TN4 253 aaKnown RBP4.19□□□□□ -1.74
USP3-215ENST00000559771 CSNK1G2-AS1Q8NCQ2 148 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 OR10P1Q8NGE3 313 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 C16orf92Q96LL3 132 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 TXN2Q99757 166 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 TMEM147Q9BVK8 224 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 WDR61Q9GZS3 305 aaKnown RBP4.19□□□□□ -1.74
USP3-215ENST00000559771 MAGT1Q9H0U3 335 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 SH3BGRL3Q9H299 93 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 FNDC4Q9H6D8 234 aaPredicted RBP4.19□□□□□ -1.74
USP3-215ENST00000559771 BIN3Q9NQY0 253 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 KCNIP2Q9NS61 270 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 TRAV2A0A0B4J234 112 aa4.18□□□□□ -1.74
USP3-215ENST00000559771 A0A0G2JRQ6 117 aa4.18□□□□□ -1.74
USP3-215ENST00000559771 C7orf77A4D0Y5 90 aa4.18□□□□□ -1.74
USP3-215ENST00000559771 COLCA2A8K830 154 aa4.18□□□□□ -1.74
USP3-215ENST00000559771 FNDC10F2Z333 226 aa4.18□□□□□ -1.74
USP3-215ENST00000559771 C17orf112F2Z3M2 114 aa4.18□□□□□ -1.74
USP3-215ENST00000559771 INS-IGF2F8WCM5 200 aa4.18□□□□□ -1.74
USP3-215ENST00000559771 K7EQG2 157 aa4.18□□□□□ -1.74
USP3-215ENST00000559771 AGPAT2O15120 278 aa4.18□□□□□ -1.74
USP3-215ENST00000559771 IFNA4P05014 189 aa4.18□□□□□ -1.74
USP3-215ENST00000559771 RNASE2P10153 161 aaKnown RBP4.18□□□□□ -1.74
USP3-215ENST00000559771 NPBWR1P48145 328 aa4.18□□□□□ -1.74
USP3-215ENST00000559771 HOXA1P49639 335 aaPredicted RBP4.18□□□□□ -1.74
USP3-215ENST00000559771 CMC4P56277 68 aaPredicted RBP4.18□□□□□ -1.74
USP3-215ENST00000559771 SPCS3P61009 180 aa4.18□□□□□ -1.74
USP3-215ENST00000559771 RAB5BP61020 215 aa4.18□□□□□ -1.74
USP3-215ENST00000559771 TMEM41BQ5BJD5 291 aa4.18□□□□□ -1.74
USP3-215ENST00000559771 ZNF709Q8N972 641 aa4.18□□□□□ -1.74
USP3-215ENST00000559771 C2CD4CQ8TF44 421 aa4.18□□□□□ -1.74
USP3-215ENST00000559771 DCANP1Q8TF63 244 aa4.18□□□□□ -1.74
USP3-215ENST00000559771 SFT2D1Q8WV19 159 aa4.18□□□□□ -1.74
USP3-215ENST00000559771 TXNDC17Q9BRA2 123 aa4.18□□□□□ -1.74
USP3-215ENST00000559771 NIPSNAP3BQ9BS92 247 aa4.18□□□□□ -1.74
USP3-215ENST00000559771 TMEM231Q9H6L2 316 aa4.18□□□□□ -1.74
USP3-215ENST00000559771 FKBP11Q9NYL4 201 aa4.18□□□□□ -1.74
USP3-215ENST00000559771 PUS1Q9Y606 427 aaKnown RBP eCLIP4.18□□□□□ -1.74
USP3-215ENST00000559771 DNAH11Q96DT5 4516 aa4.18□□□□□ -1.74
USP3-215ENST00000559771 IGHV4-28A0A0C4DH34 117 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 SMCO3A2RU48 225 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 KNCNA6PVL3 124 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 C1orf196B1AJZ1 125 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 IGLL5B9A064 214 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 C9JQL5 133 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 TMEM250H0YL14 139 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 M0R036 132 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 GNG7O60262 68 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 IGKV1-17P01599 117 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 SRP19P09132 144 aaKnown RBP4.17□□□□□ -1.74
USP3-215ENST00000559771 METTL15P1P0C7V9 234 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 BCL2P10415 239 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 CRYBB3P26998 211 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 HLA-DMBP28068 263 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 FHITP49789 147 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 TCTAP57738 103 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 RAB11AP62491 216 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 SLC38A11Q08AI6 406 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 BSXQ3C1V8 233 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 SMUG1Q53HV7 270 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 SPANXN5Q5MJ07 72 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 TMEM88Q6PEY1 159 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 ZNF600Q6ZNG1 722 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 Q6ZTC4 211 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 OR4A16Q8NH70 328 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 DTD1Q8TEA8 209 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 TVP23CQ96ET8 276 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 ACTR3CQ9C0K3 210 aaPredicted RBP4.17□□□□□ -1.74
USP3-215ENST00000559771 CTDSP1Q9GZU7 261 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 RBKSQ9H477 322 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 RPS10P5Q9NQ39 176 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 MANBALQ9NQG1 85 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 RPRMQ9NS64 109 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 VAX2Q9UIW0 290 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 CELA1Q9UNI1 258 aa4.17□□□□□ -1.74
USP3-215ENST00000559771 IGHV4-4A0A075B6R2 117 aa4.16□□□□□ -1.74
USP3-215ENST00000559771 CTXND1A0A1B0GTU2 59 aa4.16□□□□□ -1.74
USP3-215ENST00000559771 LOC102723971A0A1B0GUV8 181 aa4.16□□□□□ -1.74
USP3-215ENST00000559771 PMS2P5A8MQ11 134 aa4.16□□□□□ -1.74
USP3-215ENST00000559771 C11orf94C9JXX5 98 aa4.16□□□□□ -1.74
USP3-215ENST00000559771 RTL8CO15255 209 aa4.16□□□□□ -1.74
USP3-215ENST00000559771 CLN5O75503 358 aa4.16□□□□□ -1.74
USP3-215ENST00000559771 IFNA17P01571 189 aa4.16□□□□□ -1.74
USP3-215ENST00000559771 MIFP14174 115 aa4.16□□□□□ -1.74
USP3-215ENST00000559771 PSMB3P49720 205 aa4.16□□□□□ -1.74
USP3-215ENST00000559771 DLK1P80370 383 aa4.16□□□□□ -1.74
USP3-215ENST00000559771 RAB31Q13636 194 aa4.16□□□□□ -1.74
USP3-215ENST00000559771 C12orf74Q32Q52 190 aa4.16□□□□□ -1.74
USP3-215ENST00000559771 ACOT6Q3I5F7 207 aaPredicted RBP4.16□□□□□ -1.74
USP3-215ENST00000559771 TEPPQ6URK8 271 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms