RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 PSG9Q00887 426 aa13.04□□□□□ -0.32
CHRNA3-206ENST00000559658 WFDC3Q8IUB2 231 aa13.04□□□□□ -0.32
CHRNA3-206ENST00000559658 NHLRC2Q8NBF2 726 aa13.04□□□□□ -0.32
CHRNA3-206ENST00000559658 DCANP1Q8TF63 244 aa13.04□□□□□ -0.32
CHRNA3-206ENST00000559658 PEMTQ9UBM1 199 aa13.04□□□□□ -0.32
CHRNA3-206ENST00000559658 LYPD1Q8N2G4 141 aa13.04□□□□□ -0.32
CHRNA3-206ENST00000559658 IGF2BP2-AS1Q96M15 143 aa13.04□□□□□ -0.32
CHRNA3-206ENST00000559658 ATG101Q9BSB4 218 aa13.04□□□□□ -0.32
CHRNA3-206ENST00000559658 MS4A6AQ9H2W1 248 aa13.04□□□□□ -0.32
CHRNA3-206ENST00000559658 AAMDCQ9H7C9 122 aa13.04□□□□□ -0.32
CHRNA3-206ENST00000559658 HELTA6NFD8 242 aa13.03□□□□□ -0.32
CHRNA3-206ENST00000559658 DIRC3C9JPN6 131 aa13.03□□□□□ -0.32
CHRNA3-206ENST00000559658 NDUFS6O75380 124 aaKnown RBP13.03□□□□□ -0.32
CHRNA3-206ENST00000559658 IGLV2-11P01706 119 aa13.03□□□□□ -0.32
CHRNA3-206ENST00000559658 CENPWQ5EE01 88 aa13.03□□□□□ -0.32
CHRNA3-206ENST00000559658 TMEM61Q8N0U2 210 aa13.03□□□□□ -0.32
CHRNA3-206ENST00000559658 CMTM2Q8TAZ6 248 aa13.03□□□□□ -0.32
CHRNA3-206ENST00000559658 C16orf92Q96LL3 132 aa13.03□□□□□ -0.32
CHRNA3-206ENST00000559658 NIPSNAP3BQ9BS92 247 aa13.03□□□□□ -0.32
CHRNA3-206ENST00000559658 COL6A5A8TX70 2615 aa13.03□□□□□ -0.32
CHRNA3-206ENST00000559658 IZUMO1RA6ND01 250 aa13.02□□□□□ -0.32
CHRNA3-206ENST00000559658 HIST1H2BAQ96A08 127 aa13.02□□□□□ -0.32
CHRNA3-206ENST00000559658 SLC50A1Q9BRV3 221 aa13.02□□□□□ -0.32
CHRNA3-206ENST00000559658 CLRN3Q8NCR9 226 aa13.02□□□□□ -0.33
CHRNA3-206ENST00000559658 SDF2L1Q9HCN8 221 aa13.02□□□□□ -0.33
CHRNA3-206ENST00000559658 K7EN84 100 aa13.01□□□□□ -0.33
CHRNA3-206ENST00000559658 ZNF705DP0CH99 300 aaPredicted RBP13.01□□□□□ -0.33
CHRNA3-206ENST00000559658 ZNF705BP0CI00 300 aaPredicted RBP13.01□□□□□ -0.33
CHRNA3-206ENST00000559658 RPL23P62829 140 aaKnown RBP13.01□□□□□ -0.33
CHRNA3-206ENST00000559658 CD300EQ496F6 205 aaPredicted RBP13.01□□□□□ -0.33
CHRNA3-206ENST00000559658 LCN12Q6JVE5 192 aa13.01□□□□□ -0.33
CHRNA3-206ENST00000559658 SVBPQ8N300 66 aa13.01□□□□□ -0.33
CHRNA3-206ENST00000559658 LINC00482Q8N8I6 264 aa13.01□□□□□ -0.33
CHRNA3-206ENST00000559658 SORL1Q92673 2214 aa13□□□□□ -0.33
CHRNA3-206ENST00000559658 M0QZ24 198 aa13□□□□□ -0.33
CHRNA3-206ENST00000559658 M0R036 132 aa13□□□□□ -0.33
CHRNA3-206ENST00000559658 IGLV2-8P01709 118 aa13□□□□□ -0.33
CHRNA3-206ENST00000559658 ADIRFQ15847 76 aa13□□□□□ -0.33
CHRNA3-206ENST00000559658 LINC01551Q86U37 167 aa13□□□□□ -0.33
CHRNA3-206ENST00000559658 Q8TAT8 98 aa13□□□□□ -0.33
CHRNA3-206ENST00000559658 VGLL1Q99990 258 aa13□□□□□ -0.33
CHRNA3-206ENST00000559658 NAT8Q9UHE5 227 aa13□□□□□ -0.33
CHRNA3-206ENST00000559658 F6UB75 175 aa12.99□□□□□ -0.33
CHRNA3-206ENST00000559658 PF4P02776 101 aa12.99□□□□□ -0.33
CHRNA3-206ENST00000559658 CNN1P51911 297 aaKnown RBP12.99□□□□□ -0.33
CHRNA3-206ENST00000559658 ERCC8Q13216 396 aa12.99□□□□□ -0.33
CHRNA3-206ENST00000559658 TMEM241Q24JQ0 296 aa12.99□□□□□ -0.33
CHRNA3-206ENST00000559658 DEFB114Q30KQ6 69 aa12.99□□□□□ -0.33
CHRNA3-206ENST00000559658 Q86TA4 180 aa12.99□□□□□ -0.33
CHRNA3-206ENST00000559658 OCC1Q8TAD7 63 aa12.99□□□□□ -0.33
CHRNA3-206ENST00000559658 DYNLRB2Q8TF09 96 aa12.99□□□□□ -0.33
CHRNA3-206ENST00000559658 TCEAL7Q9BRU2 100 aa12.99□□□□□ -0.33
CHRNA3-206ENST00000559658 KLF12Q9Y4X4 402 aa12.99□□□□□ -0.33
CHRNA3-206ENST00000559658 BMI1P35226 326 aa12.99□□□□□ -0.33
CHRNA3-206ENST00000559658 TMEM183BQ1AE95 376 aa12.99□□□□□ -0.33
CHRNA3-206ENST00000559658 TVP23CQ96ET8 276 aa12.99□□□□□ -0.33
CHRNA3-206ENST00000559658 K7EQG2 157 aa12.98□□□□□ -0.33
CHRNA3-206ENST00000559658 ZNF688P0C7X2 276 aa12.98□□□□□ -0.33
CHRNA3-206ENST00000559658 GNG4P50150 75 aa12.98□□□□□ -0.33
CHRNA3-206ENST00000559658 MEOX2P50222 304 aa12.98□□□□□ -0.33
CHRNA3-206ENST00000559658 OR5I1Q13606 314 aa12.98□□□□□ -0.33
CHRNA3-206ENST00000559658 PSG3Q16557 428 aa12.98□□□□□ -0.33
CHRNA3-206ENST00000559658 FAM74A3Q4VXF1 159 aa12.98□□□□□ -0.33
CHRNA3-206ENST00000559658 C9JCJ5 164 aa12.97□□□□□ -0.33
CHRNA3-206ENST00000559658 SAP30O75446 220 aa12.97□□□□□ -0.33
CHRNA3-206ENST00000559658 UBE2G1P62253 170 aa12.97□□□□□ -0.33
CHRNA3-206ENST00000559658 PRNTQ86SH4 94 aa12.97□□□□□ -0.33
CHRNA3-206ENST00000559658 ZNF738Q8NE65 137 aa12.97□□□□□ -0.33
CHRNA3-206ENST00000559658 TSPAN4O14817 238 aa12.97□□□□□ -0.33
CHRNA3-206ENST00000559658 GPR61Q9BZJ8 451 aa12.97□□□□□ -0.33
CHRNA3-206ENST00000559658 C7orf77A4D0Y5 90 aa12.96□□□□□ -0.33
CHRNA3-206ENST00000559658 DNASE2O00115 360 aaPredicted RBP12.96□□□□□ -0.33
CHRNA3-206ENST00000559658 SNAPINO95295 136 aa12.96□□□□□ -0.33
CHRNA3-206ENST00000559658 LTAP01374 205 aa12.96□□□□□ -0.33
CHRNA3-206ENST00000559658 CSN1S1P47710 185 aa12.96□□□□□ -0.33
CHRNA3-206ENST00000559658 GDF5OSQ5U4N7 250 aa12.96□□□□□ -0.33
CHRNA3-206ENST00000559658 TMEM75Q8N9X5 138 aa12.96□□□□□ -0.33
CHRNA3-206ENST00000559658 FMC1Q96HJ9 113 aa12.96□□□□□ -0.33
CHRNA3-206ENST00000559658 FLI1Q01543 452 aaPredicted RBP12.95□□□□□ -0.34
CHRNA3-206ENST00000559658 PSMG4Q5JS54 123 aa12.95□□□□□ -0.34
CHRNA3-206ENST00000559658 BAGE2Q86Y30 109 aa12.95□□□□□ -0.34
CHRNA3-206ENST00000559658 C8orf49Q96NF6 230 aa12.95□□□□□ -0.34
CHRNA3-206ENST00000559658 PSG8Q9UQ74 426 aa12.95□□□□□ -0.34
CHRNA3-206ENST00000559658 AGRNO00468 2067 aa12.95□□□□□ -0.34
CHRNA3-206ENST00000559658 TAS2R60P59551 318 aa12.95□□□□□ -0.34
CHRNA3-206ENST00000559658 ZNF124Q15973 351 aa12.95□□□□□ -0.34
CHRNA3-206ENST00000559658 TMEM88Q6PEY1 159 aa12.95□□□□□ -0.34
CHRNA3-206ENST00000559658 RBPMS2Q6ZRY4 209 aaKnown RBP12.95□□□□□ -0.34
CHRNA3-206ENST00000559658 CBLN2Q8IUK8 224 aa12.95□□□□□ -0.34
CHRNA3-206ENST00000559658 ISOC2Q96AB3 205 aa12.95□□□□□ -0.34
CHRNA3-206ENST00000559658 NOTCH3Q9UM47 2321 aa12.95□□□□□ -0.34
CHRNA3-206ENST00000559658 MGST1P10620 155 aaKnown RBP12.94□□□□□ -0.34
CHRNA3-206ENST00000559658 LINC00322Q6ZN03 302 aaPredicted RBP12.94□□□□□ -0.34
CHRNA3-206ENST00000559658 MRPL53Q96EL3 112 aaKnown RBP12.94□□□□□ -0.34
CHRNA3-206ENST00000559658 AGPAT4-IT1Q9H0P7 198 aa12.94□□□□□ -0.34
CHRNA3-206ENST00000559658 RPS10P5Q9NQ39 176 aa12.94□□□□□ -0.34
CHRNA3-206ENST00000559658 SIGLEC8Q9NYZ4 499 aa12.94□□□□□ -0.34
CHRNA3-206ENST00000559658 RNF212Q495C1 297 aa12.93□□□□□ -0.34
CHRNA3-206ENST00000559658 ZNF747Q9BV97 191 aa12.93□□□□□ -0.34
CHRNA3-206ENST00000559658 MLST8Q9BVC4 326 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms