RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 TLCD2A6NGC4 264 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 PANO1I0J062 215 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 J3QQQ9 107 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 TMEM256-PLSCR3K7ERE1 68 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 LEPROTO15243 131 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 TPST1O60507 370 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 DNAH10OSP0CZ25 163 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 PSMB8P28062 276 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 KRTAP10-1P60331 282 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 RRAS2P62070 204 aaPredicted RBP2.14□□□□□ -2.07
LRRC28-212ENST00000558911 RHOGP84095 191 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 NDPQ00604 133 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 VMA21Q3ZAQ7 101 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 LHFPL1Q86WI0 220 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 TCTE3Q8IZS6 198 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 RPP25LQ8N5L8 163 aaKnown RBP2.14□□□□□ -2.07
LRRC28-212ENST00000558911 CNEP1R1Q8N9A8 125 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 SPANXA2-OT1Q8N9U9 137 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 STAG3L4Q8TBR4 150 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 C1orf54Q8WWF1 131 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 ELSPBP1Q96BH3 223 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 C12orf57Q99622 126 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 MGLLQ99685 303 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 LPAR5Q9H1C0 372 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 OTORQ9NRC9 128 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 SLC39A9Q9NUM3 307 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 CALML5Q9NZT1 146 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 ZNF835Q9Y2P0 537 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 DDX60Q8IY21 1712 aaKnown RBP2.14□□□□□ -2.07
LRRC28-212ENST00000558911 OBSL1O75147 1896 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 KMT2DO14686 5537 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 CMYA5Q8N3K9 4069 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 MUC4Q99102 2169 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 RGPD8O14715 1765 aaPredicted RBP2.13□□□□□ -2.07
LRRC28-212ENST00000558911 RGPD5Q99666 1765 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 MYH7P12883 1935 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 IGKV1-9A0A0C4DH69 117 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 DHRS12A0PJE2 317 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 C19orf71A6NCJ1 209 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 ARRDC5A6NEK1 342 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 A8MUU9 505 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 M0R378 163 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 RTL8CO15255 209 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 GNG7O60262 68 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 LYZL6O75951 148 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 LY6HO94772 140 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 DPM2O94777 84 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 NDUFB2O95178 105 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 IGF2P01344 180 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 CXCL1P09341 107 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 SCTP09683 121 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 UCHL1P09936 223 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 IGHV3-30-3P0DP02 117 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 CCL5P13501 91 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 ZNF19P17023 458 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 MPV17P39210 176 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 EIF3IQ13347 325 aaKnown RBP2.13□□□□□ -2.07
LRRC28-212ENST00000558911 LINC01554Q52M75 96 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 SPANXN3Q5MJ09 141 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 BCL2L15Q5TBC7 163 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 C1orf140Q5VVS0 124 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 Q5W150 140 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 Q5XG85 94 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 ZFP2Q6ZN57 461 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 C16orf47Q6ZP98 133 aaPredicted RBP2.13□□□□□ -2.07
LRRC28-212ENST00000558911 SDIM1Q6ZPB5 146 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 BPIFA4PQ86YQ2 179 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 RNF175Q8N4F7 328 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 OR2T10Q8NGZ9 312 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 PPTC7Q8NI37 304 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 WFDC5Q8TCV5 224 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 TEX37Q96LM6 180 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 GGACTQ9BVM4 153 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 YIPF3Q9GZM5 350 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 OR8D2Q9GZM6 311 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 TUBA4BQ9H853 241 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 RNF122Q9H9V4 155 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 PRO0461Q9UI25 63 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 ERG28Q9UKR5 140 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 DOT1LQ8TEK3 1739 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 ARAP2Q8WZ64 1704 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 SCN1AP35498 2009 aa2.13□□□□□ -2.07
LRRC28-212ENST00000558911 COL5A2P05997 1499 aaPredicted RBP2.13□□□□□ -2.07
LRRC28-212ENST00000558911 PKDREJQ9NTG1 2253 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
LRRC28-212ENST00000558911 FOCADQ5VW36 1801 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 PHIPQ8WWQ0 1821 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 CDK5RAP2Q96SN8 1893 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 CDC42BPBQ9Y5S2 1711 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 CDC42BPGQ6DT37 1551 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 TNS3Q68CZ2 1445 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 IGLV3-10A0A075B6K4 115 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 IGKV1D-37A0A075B6S9 117 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 A0A0D9SEW6 157 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 LOC107984640A0A0U1RRK4 108 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 FABP5P3A8MUU1 101 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 M0R2Z0 102 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 SOD1P00441 154 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 MT-ND4LP03901 98 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 ZNF286BP0CG31 522 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms