RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 FABP2P12104 132 aa1.26□□□□□ -2.21
CASC4-206ENST00000558847 SDC2P34741 201 aa1.26□□□□□ -2.21
CASC4-206ENST00000558847 OR9Q1Q8NGQ5 310 aa1.26□□□□□ -2.21
CASC4-206ENST00000558847 LXNQ9BS40 222 aa1.26□□□□□ -2.21
CASC4-206ENST00000558847 EFCAB11Q9BUY7 163 aa1.26□□□□□ -2.21
CASC4-206ENST00000558847 S100A11P31949 105 aa1.25□□□□□ -2.21
CASC4-206ENST00000558847 SRP9P49458 86 aaKnown RBP1.25□□□□□ -2.21
CASC4-206ENST00000558847 TMEM14EPQ6UXP3 125 aa1.25□□□□□ -2.21
CASC4-206ENST00000558847 THEM6Q8WUY1 208 aa1.25□□□□□ -2.21
CASC4-206ENST00000558847 SKA2Q8WVK7 121 aaPredicted RBP1.25□□□□□ -2.21
CASC4-206ENST00000558847 CARD19Q96LW7 228 aa1.25□□□□□ -2.21
CASC4-206ENST00000558847 CST11Q9H112 138 aa1.25□□□□□ -2.21
CASC4-206ENST00000558847 CECR2Q9BXF3 1484 aa1.24□□□□□ -2.21
CASC4-206ENST00000558847 C5orf58C9J3I9 102 aa1.24□□□□□ -2.21
CASC4-206ENST00000558847 GABARAPH6UMI1 98 aa1.24□□□□□ -2.21
CASC4-206ENST00000558847 NCR3O14931 201 aa1.24□□□□□ -2.21
CASC4-206ENST00000558847 FABP4P15090 132 aa1.24□□□□□ -2.21
CASC4-206ENST00000558847 TMEM128Q5BJH2 165 aa1.24□□□□□ -2.21
CASC4-206ENST00000558847 PSMF1Q92530 271 aa1.24□□□□□ -2.21
CASC4-206ENST00000558847 DIRC1Q969H9 104 aa1.24□□□□□ -2.21
CASC4-206ENST00000558847 OR4C12Q96R67 309 aa1.24□□□□□ -2.21
CASC4-206ENST00000558847 KIAA1549Q9HCM3 1950 aa1.24□□□□□ -2.21
CASC4-206ENST00000558847 DLG5Q8TDM6 1919 aa1.24□□□□□ -2.21
CASC4-206ENST00000558847 MYH2Q9UKX2 1941 aa1.23□□□□□ -2.21
CASC4-206ENST00000558847 TSTD3H0UI37 97 aa1.23□□□□□ -2.21
CASC4-206ENST00000558847 S100GP29377 79 aa1.23□□□□□ -2.21
CASC4-206ENST00000558847 B2MP61769 119 aa1.23□□□□□ -2.21
CASC4-206ENST00000558847 VMA21Q3ZAQ7 101 aa1.23□□□□□ -2.21
CASC4-206ENST00000558847 SPRNQ5BIV9 151 aa1.23□□□□□ -2.21
CASC4-206ENST00000558847 SAMD13Q5VXD3 122 aa1.23□□□□□ -2.21
CASC4-206ENST00000558847 OR5H6Q8NGV6 325 aa1.23□□□□□ -2.21
CASC4-206ENST00000558847 PRELID3AQ96N28 172 aa1.23□□□□□ -2.21
CASC4-206ENST00000558847 SPANXA1Q9NS26 97 aa1.23□□□□□ -2.21
CASC4-206ENST00000558847 MED31Q9Y3C7 131 aa1.23□□□□□ -2.21
CASC4-206ENST00000558847 JMJD7-PLA2G4BH0Y9G9 81 aa1.22□□□□□ -2.21
CASC4-206ENST00000558847 H7BYZ3 331 aa1.22□□□□□ -2.21
CASC4-206ENST00000558847 KLF7O75840 302 aaPredicted RBP1.22□□□□□ -2.21
CASC4-206ENST00000558847 IGHV3-33P01772 117 aa1.22□□□□□ -2.21
CASC4-206ENST00000558847 TPT1P13693 172 aaKnown RBP1.22□□□□□ -2.21
CASC4-206ENST00000558847 LSM3P62310 102 aaKnown RBP1.22□□□□□ -2.21
CASC4-206ENST00000558847 LINC00299Q6ZSB3 139 aa1.22□□□□□ -2.21
CASC4-206ENST00000558847 LINC00305Q7Z4B0 112 aa1.22□□□□□ -2.21
CASC4-206ENST00000558847 OR5AK2Q8NH90 309 aa1.22□□□□□ -2.21
CASC4-206ENST00000558847 CCL4L1Q8NHW4 92 aa1.22□□□□□ -2.21
CASC4-206ENST00000558847 RMND5BQ96G75 393 aaPredicted RBP1.22□□□□□ -2.21
CASC4-206ENST00000558847 ZC2HC1AQ96GY0 325 aa1.22□□□□□ -2.21
CASC4-206ENST00000558847 FREM3P0C091 2139 aa1.22□□□□□ -2.21
CASC4-206ENST00000558847 TNRC6AQ8NDV7 1962 aaKnown RBP1.21□□□□□ -2.22
CASC4-206ENST00000558847 TRBV7-6A0A0J9YX20 115 aa1.21□□□□□ -2.22
CASC4-206ENST00000558847 TRBV27A0A0K0K1C4 114 aa1.21□□□□□ -2.22
CASC4-206ENST00000558847 C9orf170A2RU37 121 aa1.21□□□□□ -2.22
CASC4-206ENST00000558847 C5orf67F2Z3F1 127 aa1.21□□□□□ -2.22
CASC4-206ENST00000558847 TRACP01848 142 aa1.21□□□□□ -2.22
CASC4-206ENST00000558847 SAA1P0DJI8 122 aaPredicted RBP1.21□□□□□ -2.22
CASC4-206ENST00000558847 POLR2HP52434 150 aaKnown RBP1.21□□□□□ -2.22
CASC4-206ENST00000558847 DIAPH2-AS1Q14236 149 aa1.21□□□□□ -2.22
CASC4-206ENST00000558847 SPATA45Q537H7 98 aa1.21□□□□□ -2.22
CASC4-206ENST00000558847 GRPEL2Q8TAA5 225 aa1.21□□□□□ -2.22
CASC4-206ENST00000558847 HSPB11Q9Y547 144 aa1.21□□□□□ -2.22
CASC4-206ENST00000558847 BCL9O00512 1426 aa1.21□□□□□ -2.22
CASC4-206ENST00000558847 FRMPD1Q5SYB0 1578 aa1.21□□□□□ -2.22
CASC4-206ENST00000558847 MYLKQ15746 1914 aa1.21□□□□□ -2.22
CASC4-206ENST00000558847 PBRM1Q86U86 1689 aa1.2□□□□□ -2.22
CASC4-206ENST00000558847 TRAV13-1A0A0B4J241 112 aa1.2□□□□□ -2.22
CASC4-206ENST00000558847 GNG14A0A1W2PPG7 69 aa1.2□□□□□ -2.22
CASC4-206ENST00000558847 H0YJX3 145 aa1.2□□□□□ -2.22
CASC4-206ENST00000558847 PPYP01298 95 aa1.2□□□□□ -2.22
CASC4-206ENST00000558847 DR1Q01658 176 aa1.2□□□□□ -2.22
CASC4-206ENST00000558847 MIR22HGQ0VDD5 57 aa1.2□□□□□ -2.22
CASC4-206ENST00000558847 FOXI2Q6ZQN5 318 aa1.2□□□□□ -2.22
CASC4-206ENST00000558847 TMEM35BQ8NCS4 154 aa1.2□□□□□ -2.22
CASC4-206ENST00000558847 OR10AC1Q8NH08 325 aa1.2□□□□□ -2.22
CASC4-206ENST00000558847 SPANXCQ9NY87 97 aa1.2□□□□□ -2.22
CASC4-206ENST00000558847 NUP210LQ5VU65 1888 aa1.2□□□□□ -2.22
CASC4-206ENST00000558847 ROS1P08922 2347 aa1.2□□□□□ -2.22
CASC4-206ENST00000558847 NCOA6Q14686 2063 aaPredicted RBP1.19□□□□□ -2.22
CASC4-206ENST00000558847 A0A1W2PPM0 123 aa1.19□□□□□ -2.22
CASC4-206ENST00000558847 PRORSD1PA6NEY8 169 aa1.19□□□□□ -2.22
CASC4-206ENST00000558847 ARL5CA6NH57 179 aa1.19□□□□□ -2.22
CASC4-206ENST00000558847 H3BMG7 143 aa1.19□□□□□ -2.22
CASC4-206ENST00000558847 MAXP61244 160 aa1.19□□□□□ -2.22
CASC4-206ENST00000558847 LINC00575Q6W349 94 aa1.19□□□□□ -2.22
CASC4-206ENST00000558847 LINC00269Q8N2A0 174 aa1.19□□□□□ -2.22
CASC4-206ENST00000558847 MYO5AQ9Y4I1 1855 aaKnown RBP1.19□□□□□ -2.22
CASC4-206ENST00000558847 MYH3P11055 1940 aa1.19□□□□□ -2.22
CASC4-206ENST00000558847 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.18□□□□□ -2.22
CASC4-206ENST00000558847 IGLV3-1P01715 115 aa1.18□□□□□ -2.22
CASC4-206ENST00000558847 RPS28P62857 69 aaKnown RBP1.18□□□□□ -2.22
CASC4-206ENST00000558847 GLIPR1L1Q6UWM5 242 aa1.18□□□□□ -2.22
CASC4-206ENST00000558847 CASC2Q6XLA1 102 aa1.18□□□□□ -2.22
CASC4-206ENST00000558847 WFDC10AQ9H1F0 79 aa1.18□□□□□ -2.22
CASC4-206ENST00000558847 HEATR1Q9H583 2144 aaKnown RBP1.18□□□□□ -2.22
CASC4-206ENST00000558847 PEAK1Q9H792 1746 aa1.18□□□□□ -2.22
CASC4-206ENST00000558847 MCM3APO60318 1980 aa1.17□□□□□ -2.22
CASC4-206ENST00000558847 LOC107986453A0A1B0GWG9 222 aa1.17□□□□□ -2.22
CASC4-206ENST00000558847 CCSMST1Q4G0I0 132 aa1.17□□□□□ -2.22
CASC4-206ENST00000558847 TAC4Q86UU9 113 aa1.17□□□□□ -2.22
CASC4-206ENST00000558847 MORN4Q8NDC4 146 aa1.17□□□□□ -2.22
CASC4-206ENST00000558847 CCDC115Q96NT0 180 aa1.17□□□□□ -2.22
CASC4-206ENST00000558847 BOKQ9UMX3 212 aaPredicted RBP1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms