RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 ATP5J2P56134 94 aa12.26□□□□□ -0.45
AP4E1-202ENST00000558439 EBLN2Q6P2I7 272 aa12.26□□□□□ -0.45
AP4E1-202ENST00000558439 Q8NA96 180 aa12.26□□□□□ -0.45
AP4E1-202ENST00000558439 PET117Q6UWS5 81 aa12.26□□□□□ -0.45
AP4E1-202ENST00000558439 ZNF562Q6V9R5 426 aa12.26□□□□□ -0.45
AP4E1-202ENST00000558439 ZNF491Q8N8L2 437 aa12.26□□□□□ -0.45
AP4E1-202ENST00000558439 TP53TG3Q9ULZ0 132 aa12.26□□□□□ -0.45
AP4E1-202ENST00000558439 PHLDA3Q9Y5J5 127 aa12.26□□□□□ -0.45
AP4E1-202ENST00000558439 G3V318 75 aa12.26□□□□□ -0.45
AP4E1-202ENST00000558439 LINC00173Q6ZV60 143 aa12.26□□□□□ -0.45
AP4E1-202ENST00000558439 STPG4Q8N801 248 aa12.26□□□□□ -0.45
AP4E1-202ENST00000558439 TRAV8-6A0A0B4J262 113 aa12.26□□□□□ -0.45
AP4E1-202ENST00000558439 FBLN7Q53RD9 439 aa12.26□□□□□ -0.45
AP4E1-202ENST00000558439 RNF182Q8N6D2 247 aa12.26□□□□□ -0.45
AP4E1-202ENST00000558439 DEFB104AQ8WTQ1 72 aa12.26□□□□□ -0.45
AP4E1-202ENST00000558439 HLA-DMBP28068 263 aa12.25□□□□□ -0.45
AP4E1-202ENST00000558439 CLEC2AQ6UVW9 174 aa12.25□□□□□ -0.45
AP4E1-202ENST00000558439 IGHV1-24A0A0C4DH33 117 aa12.25□□□□□ -0.45
AP4E1-202ENST00000558439 LEPP41159 167 aa12.25□□□□□ -0.45
AP4E1-202ENST00000558439 SORL1Q92673 2214 aa12.25□□□□□ -0.45
AP4E1-202ENST00000558439 GP9P14770 177 aa12.25□□□□□ -0.45
AP4E1-202ENST00000558439 WFDC12Q8WWY7 111 aa12.25□□□□□ -0.45
AP4E1-202ENST00000558439 FOXC2Q99958 501 aa12.25□□□□□ -0.45
AP4E1-202ENST00000558439 BPESC1Q9GZL8 116 aa12.25□□□□□ -0.45
AP4E1-202ENST00000558439 PCSK5Q92824 1860 aa12.24□□□□□ -0.45
AP4E1-202ENST00000558439 A0A1B0GW15 77 aa12.24□□□□□ -0.45
AP4E1-202ENST00000558439 A1L4Q6 167 aa12.24□□□□□ -0.45
AP4E1-202ENST00000558439 SRD5A1P18405 259 aa12.24□□□□□ -0.45
AP4E1-202ENST00000558439 LINC00322Q6ZN03 302 aaPredicted RBP12.24□□□□□ -0.45
AP4E1-202ENST00000558439 ZNF492Q9P255 531 aa12.24□□□□□ -0.45
AP4E1-202ENST00000558439 MYO9AB2RTY4 2548 aa12.24□□□□□ -0.45
AP4E1-202ENST00000558439 RAB9AP51151 201 aa12.24□□□□□ -0.45
AP4E1-202ENST00000558439 TMEM75Q8N9X5 138 aa12.24□□□□□ -0.45
AP4E1-202ENST00000558439 GTSF1Q8WW33 167 aa12.24□□□□□ -0.45
AP4E1-202ENST00000558439 ST20Q9HBF5 79 aa12.24□□□□□ -0.45
AP4E1-202ENST00000558439 SCGB1D4Q6XE38 83 aa12.24□□□□□ -0.45
AP4E1-202ENST00000558439 LTAP01374 205 aa12.23□□□□□ -0.45
AP4E1-202ENST00000558439 IGLV1-47P01700 117 aa12.23□□□□□ -0.45
AP4E1-202ENST00000558439 HBDP02042 147 aa12.23□□□□□ -0.45
AP4E1-202ENST00000558439 SAA4P35542 130 aa12.23□□□□□ -0.45
AP4E1-202ENST00000558439 GTF2H5Q6ZYL4 71 aa12.23□□□□□ -0.45
AP4E1-202ENST00000558439 IFI27L1Q96BM0 104 aa12.23□□□□□ -0.45
AP4E1-202ENST00000558439 TET2Q6N021 2002 aaPredicted RBP12.23□□□□□ -0.45
AP4E1-202ENST00000558439 TRAV40A0A0B4J280 105 aa12.23□□□□□ -0.45
AP4E1-202ENST00000558439 COL25A1Q9BXS0 654 aaPredicted RBP12.23□□□□□ -0.45
AP4E1-202ENST00000558439 NOTCH2Q04721 2471 aa12.23□□□□□ -0.45
AP4E1-202ENST00000558439 K7EIM0 57 aa12.22□□□□□ -0.45
AP4E1-202ENST00000558439 M0R1W7 72 aa12.22□□□□□ -0.45
AP4E1-202ENST00000558439 IGF2-ASQ6U949 168 aa12.22□□□□□ -0.45
AP4E1-202ENST00000558439 ZNF502Q8TBZ5 544 aa12.22□□□□□ -0.45
AP4E1-202ENST00000558439 FREM2Q5SZK8 3169 aa12.22□□□□□ -0.45
AP4E1-202ENST00000558439 USP9YO00507 2555 aaPredicted RBP12.22□□□□□ -0.45
AP4E1-202ENST00000558439 PCP4P48539 62 aa12.22□□□□□ -0.45
AP4E1-202ENST00000558439 LINC00574Q9H8X3 128 aa12.22□□□□□ -0.45
AP4E1-202ENST00000558439 H3BRN7 92 aa12.22□□□□□ -0.45
AP4E1-202ENST00000558439 I3L2K1 104 aa12.22□□□□□ -0.45
AP4E1-202ENST00000558439 GDF5OSQ5U4N7 250 aa12.22□□□□□ -0.45
AP4E1-202ENST00000558439 LYPD1Q8N2G4 141 aa12.22□□□□□ -0.45
AP4E1-202ENST00000558439 GFRA4Q9GZZ7 299 aa12.22□□□□□ -0.45
AP4E1-202ENST00000558439 C7orf69Q9H7B7 122 aa12.22□□□□□ -0.45
AP4E1-202ENST00000558439 TEX22C9J3V5 150 aa12.21□□□□□ -0.45
AP4E1-202ENST00000558439 ATP6V0E1O15342 81 aa12.21□□□□□ -0.45
AP4E1-202ENST00000558439 CT83Q5H943 113 aa12.21□□□□□ -0.45
AP4E1-202ENST00000558439 SMIM12Q96EX1 92 aa12.21□□□□□ -0.45
AP4E1-202ENST00000558439 FAM74A4Q5TZK3 123 aa12.21□□□□□ -0.45
AP4E1-202ENST00000558439 C8orf31Q8N9H6 132 aa12.21□□□□□ -0.45
AP4E1-202ENST00000558439 VGLL1Q99990 258 aa12.21□□□□□ -0.46
AP4E1-202ENST00000558439 C2CD3Q4AC94 2353 aa12.2□□□□□ -0.46
AP4E1-202ENST00000558439 H3BVH4 76 aa12.2□□□□□ -0.46
AP4E1-202ENST00000558439 RNF114Q9Y508 228 aa12.2□□□□□ -0.46
AP4E1-202ENST00000558439 FAM120AOSQ5T036 256 aa12.2□□□□□ -0.46
AP4E1-202ENST00000558439 RUSC1-AS1Q66K80 236 aa12.2□□□□□ -0.46
AP4E1-202ENST00000558439 AMMECR1LQ6DCA0 310 aa12.2□□□□□ -0.46
AP4E1-202ENST00000558439 TLN2Q9Y4G6 2542 aa12.2□□□□□ -0.46
AP4E1-202ENST00000558439 SRSF9Q13242 221 aaKnown RBP eCLIP12.19□□□□□ -0.46
AP4E1-202ENST00000558439 TMEM14CQ9P0S9 112 aa12.19□□□□□ -0.46
AP4E1-202ENST00000558439 H3BUT2 72 aa12.19□□□□□ -0.46
AP4E1-202ENST00000558439 RNASE4P34096 147 aaKnown RBP12.19□□□□□ -0.46
AP4E1-202ENST00000558439 WIPF2Q8TF74 440 aaPredicted RBP12.19□□□□□ -0.46
AP4E1-202ENST00000558439 PIMREGQ9BSJ6 248 aa12.19□□□□□ -0.46
AP4E1-202ENST00000558439 WNK1Q9H4A3 2382 aa12.19□□□□□ -0.46
AP4E1-202ENST00000558439 EFNA4P52798 201 aa12.19□□□□□ -0.46
AP4E1-202ENST00000558439 MINOS1Q5TGZ0 78 aa12.19□□□□□ -0.46
AP4E1-202ENST00000558439 PRR25Q96S07 402 aa12.19□□□□□ -0.46
AP4E1-202ENST00000558439 MINOS1-NBL1R4GNA1 71 aa12.19□□□□□ -0.46
AP4E1-202ENST00000558439 HIVEP3Q5T1R4 2406 aa12.18□□□□□ -0.46
AP4E1-202ENST00000558439 FAM231BA6NCW3 169 aa12.18□□□□□ -0.46
AP4E1-202ENST00000558439 SLC50A1Q9BRV3 221 aa12.18□□□□□ -0.46
AP4E1-202ENST00000558439 PEF1Q9UBV8 284 aaKnown RBP12.18□□□□□ -0.46
AP4E1-202ENST00000558439 CCDC168Q8NDH2 2452 aa12.18□□□□□ -0.46
AP4E1-202ENST00000558439 NDUFA3O95167 84 aa12.18□□□□□ -0.46
AP4E1-202ENST00000558439 PAX8Q06710 450 aa12.18□□□□□ -0.46
AP4E1-202ENST00000558439 HAX1O00165 279 aa12.18□□□□□ -0.46
AP4E1-202ENST00000558439 SIGLEC15Q6ZMC9 328 aa12.18□□□□□ -0.46
AP4E1-202ENST00000558439 CCL19Q99731 98 aa12.18□□□□□ -0.46
AP4E1-202ENST00000558439 SRSF8Q9BRL6 282 aaKnown RBP12.18□□□□□ -0.46
AP4E1-202ENST00000558439 CRYGCP07315 174 aa12.17□□□□□ -0.46
AP4E1-202ENST00000558439 PDE6HQ13956 83 aa12.17□□□□□ -0.46
AP4E1-202ENST00000558439 PRSS57Q6UWY2 283 aa12.17□□□□□ -0.46
AP4E1-202ENST00000558439 MRPS16Q9Y3D3 137 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms