RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 DEFA1P59665 94 aa8.8□□□□□ -1
CDC42BPB-202ENST00000558321 DEFA3P59666 94 aa8.8□□□□□ -1
CDC42BPB-202ENST00000558321 IFITM3Q01628 133 aa8.8□□□□□ -1
CDC42BPB-202ENST00000558321 NHLH2Q02577 135 aa8.8□□□□□ -1
CDC42BPB-202ENST00000558321 OXA1LQ15070 435 aa8.8□□□□□ -1
CDC42BPB-202ENST00000558321 CHAC2Q8WUX2 184 aa8.8□□□□□ -1
CDC42BPB-202ENST00000558321 SAT2Q96F10 170 aaPredicted RBP8.8□□□□□ -1
CDC42BPB-202ENST00000558321 NMES1Q9C002 83 aa8.8□□□□□ -1
CDC42BPB-202ENST00000558321 EPPK1P58107 5090 aaKnown RBP8.79□□□□□ -1
CDC42BPB-202ENST00000558321 LYRM9A8MSI8 78 aa8.79□□□□□ -1
CDC42BPB-202ENST00000558321 PRAC2D3DTV9 90 aa8.79□□□□□ -1
CDC42BPB-202ENST00000558321 SSNA1O43805 119 aa8.79□□□□□ -1
CDC42BPB-202ENST00000558321 UBE2DNLQ8IWF7 75 aa8.79□□□□□ -1
CDC42BPB-202ENST00000558321 POM121L12Q8N7R1 296 aa8.79□□□□□ -1
CDC42BPB-202ENST00000558321 OR5C1Q8NGR4 320 aa8.79□□□□□ -1
CDC42BPB-202ENST00000558321 THAP6Q8TBB0 222 aa8.79□□□□□ -1
CDC42BPB-202ENST00000558321 ZNF586Q9NXT0 402 aa8.79□□□□□ -1
CDC42BPB-202ENST00000558321 OR5AC2Q9NZP5 309 aa8.79□□□□□ -1
CDC42BPB-202ENST00000558321 TIMM9Q9Y5J7 89 aa8.79□□□□□ -1
CDC42BPB-202ENST00000558321 CLINT1Q14677 625 aa8.78□□□□□ -1
CDC42BPB-202ENST00000558321 FCN2Q15485 313 aa8.78□□□□□ -1
CDC42BPB-202ENST00000558321 CCDC28AQ8IWP9 274 aa8.78□□□□□ -1
CDC42BPB-202ENST00000558321 MARVELD1Q9BSK0 173 aa8.78□□□□□ -1
CDC42BPB-202ENST00000558321 NPCDR1Q9BY65 106 aa8.78□□□□□ -1
CDC42BPB-202ENST00000558321 PARD6GQ9BYG4 376 aaPredicted RBP8.78□□□□□ -1
CDC42BPB-202ENST00000558321 TRBV19A0A075B6N1 114 aa8.77□□□□□ -1.01
CDC42BPB-202ENST00000558321 H7BYZ3 331 aa8.77□□□□□ -1.01
CDC42BPB-202ENST00000558321 J3KRW8 73 aa8.77□□□□□ -1.01
CDC42BPB-202ENST00000558321 HIST1H1EP10412 219 aaKnown RBP8.77□□□□□ -1.01
CDC42BPB-202ENST00000558321 LEPP41159 167 aa8.77□□□□□ -1.01
CDC42BPB-202ENST00000558321 GCSAMLQ5JQS6 135 aa8.77□□□□□ -1.01
CDC42BPB-202ENST00000558321 TMEM88Q6PEY1 159 aa8.77□□□□□ -1.01
CDC42BPB-202ENST00000558321 BLNKQ8WV28 456 aa8.77□□□□□ -1.01
CDC42BPB-202ENST00000558321 C16orf74Q96GX8 76 aa8.77□□□□□ -1.01
CDC42BPB-202ENST00000558321 TMEM14CQ9P0S9 112 aa8.77□□□□□ -1.01
CDC42BPB-202ENST00000558321 TIMM8BQ9Y5J9 83 aaPredicted RBP8.77□□□□□ -1.01
CDC42BPB-202ENST00000558321 F5H768 121 aa8.76□□□□□ -1.01
CDC42BPB-202ENST00000558321 H0YIZ8 118 aa8.76□□□□□ -1.01
CDC42BPB-202ENST00000558321 M0R2N4 97 aa8.76□□□□□ -1.01
CDC42BPB-202ENST00000558321 ZNF253O75346 499 aa8.76□□□□□ -1.01
CDC42BPB-202ENST00000558321 CT45A10P0DMU9 189 aa8.76□□□□□ -1.01
CDC42BPB-202ENST00000558321 PYYP10082 97 aa8.76□□□□□ -1.01
CDC42BPB-202ENST00000558321 ZNF493Q6ZR52 646 aa8.76□□□□□ -1.01
CDC42BPB-202ENST00000558321 PPP1R1CQ8WVI7 109 aa8.76□□□□□ -1.01
CDC42BPB-202ENST00000558321 C20orf144Q9BQM9 153 aa8.76□□□□□ -1.01
CDC42BPB-202ENST00000558321 AAMDCQ9H7C9 122 aa8.76□□□□□ -1.01
CDC42BPB-202ENST00000558321 NOP10Q9NPE3 64 aaKnown RBP8.76□□□□□ -1.01
CDC42BPB-202ENST00000558321 BATF3Q9NR55 127 aa8.76□□□□□ -1.01
CDC42BPB-202ENST00000558321 KCNIP2Q9NS61 270 aa8.76□□□□□ -1.01
CDC42BPB-202ENST00000558321 PRELID1Q9Y255 219 aa8.76□□□□□ -1.01
CDC42BPB-202ENST00000558321 TRAV12-3A0A0B4J271 114 aa8.75□□□□□ -1.01
CDC42BPB-202ENST00000558321 CBY3A6NI87 242 aa8.75□□□□□ -1.01
CDC42BPB-202ENST00000558321 C17orf112F2Z3M2 114 aa8.75□□□□□ -1.01
CDC42BPB-202ENST00000558321 M0R3E3 92 aa8.75□□□□□ -1.01
CDC42BPB-202ENST00000558321 ATP5G1P05496 136 aa8.75□□□□□ -1.01
CDC42BPB-202ENST00000558321 PET100P0DJ07 73 aa8.75□□□□□ -1.01
CDC42BPB-202ENST00000558321 ATP5G3P48201 142 aa8.75□□□□□ -1.01
CDC42BPB-202ENST00000558321 H2BFSP57053 126 aa8.75□□□□□ -1.01
CDC42BPB-202ENST00000558321 ERCC8Q13216 396 aa8.75□□□□□ -1.01
CDC42BPB-202ENST00000558321 KIR3DS1Q14943 382 aa8.75□□□□□ -1.01
CDC42BPB-202ENST00000558321 GFI1BQ5VTD9 330 aa8.75□□□□□ -1.01
CDC42BPB-202ENST00000558321 MRPL53Q96EL3 112 aaKnown RBP8.75□□□□□ -1.01
CDC42BPB-202ENST00000558321 PLAC8L1A1L4L8 177 aa8.74□□□□□ -1.01
CDC42BPB-202ENST00000558321 NPIPB6E9PJ23 425 aa8.74□□□□□ -1.01
CDC42BPB-202ENST00000558321 IFNA5P01569 189 aa8.74□□□□□ -1.01
CDC42BPB-202ENST00000558321 NBEAP1P0C6P0 100 aa8.74□□□□□ -1.01
CDC42BPB-202ENST00000558321 MIR17HGQ75NE6 70 aa8.74□□□□□ -1.01
CDC42BPB-202ENST00000558321 EXOC3-AS1Q8N2X6 119 aa8.74□□□□□ -1.01
CDC42BPB-202ENST00000558321 C15orf53Q8NAA6 179 aa8.74□□□□□ -1.01
CDC42BPB-202ENST00000558321 SCGB1C1Q8TD33 95 aa8.74□□□□□ -1.01
CDC42BPB-202ENST00000558321 TMEM263Q8WUH6 116 aaKnown RBP8.74□□□□□ -1.01
CDC42BPB-202ENST00000558321 LINC00477Q96M19 166 aa8.74□□□□□ -1.01
CDC42BPB-202ENST00000558321 ODF3Q96PU9 254 aa8.74□□□□□ -1.01
CDC42BPB-202ENST00000558321 ATG101Q9BSB4 218 aa8.74□□□□□ -1.01
CDC42BPB-202ENST00000558321 SLC25A2Q9BXI2 301 aa8.74□□□□□ -1.01
CDC42BPB-202ENST00000558321 WDR61Q9GZS3 305 aaKnown RBP8.74□□□□□ -1.01
CDC42BPB-202ENST00000558321 OR51M1Q9H341 326 aa8.74□□□□□ -1.01
CDC42BPB-202ENST00000558321 IGLV2-18A0A075B6J9 118 aa8.73□□□□□ -1.01
CDC42BPB-202ENST00000558321 SNURFLB1AK76 121 aa8.73□□□□□ -1.01
CDC42BPB-202ENST00000558321 NDUFB4O95168 129 aa8.73□□□□□ -1.01
CDC42BPB-202ENST00000558321 MPC2O95563 127 aa8.73□□□□□ -1.01
CDC42BPB-202ENST00000558321 PDE6HQ13956 83 aa8.73□□□□□ -1.01
CDC42BPB-202ENST00000558321 ICAM4Q14773 271 aa8.73□□□□□ -1.01
CDC42BPB-202ENST00000558321 RNF212Q495C1 297 aa8.73□□□□□ -1.01
CDC42BPB-202ENST00000558321 FAM122CQ6P4D5 195 aa8.73□□□□□ -1.01
CDC42BPB-202ENST00000558321 RNASE8Q8TDE3 154 aaKnown RBP8.73□□□□□ -1.01
CDC42BPB-202ENST00000558321 ATP5SQ99766 215 aa8.73□□□□□ -1.01
CDC42BPB-202ENST00000558321 PAXXQ9BUH6 204 aa8.73□□□□□ -1.01
CDC42BPB-202ENST00000558321 HSPB11Q9Y547 144 aa8.73□□□□□ -1.01
CDC42BPB-202ENST00000558321 BIRC6Q9NR09 4857 aa8.72□□□□□ -1.01
CDC42BPB-202ENST00000558321 NUDT3O95989 172 aa8.72□□□□□ -1.01
CDC42BPB-202ENST00000558321 SLC25A5P05141 298 aaKnown RBP8.72□□□□□ -1.01
CDC42BPB-202ENST00000558321 RPL12P30050 165 aaKnown RBP8.72□□□□□ -1.01
CDC42BPB-202ENST00000558321 FFAR4Q5NUL3 377 aa8.72□□□□□ -1.01
CDC42BPB-202ENST00000558321 LINC00336Q6ZUF6 198 aa8.72□□□□□ -1.01
CDC42BPB-202ENST00000558321 RNF141Q8WVD5 230 aa8.72□□□□□ -1.01
CDC42BPB-202ENST00000558321 FAM167A-AS1Q96KT0 104 aa8.72□□□□□ -1.01
CDC42BPB-202ENST00000558321 MRPL32Q9BYC8 188 aaKnown RBP8.72□□□□□ -1.01
CDC42BPB-202ENST00000558321 SMIM3Q9BZL3 60 aa8.72□□□□□ -1.01
CDC42BPB-202ENST00000558321 AGPAT4-IT1Q9H0P7 198 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms