RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 A0A1W2PPR1 153 aa6.48□□□□□ -1.37
SPG11-209ENST00000558253 TMEM189A5PLL7 270 aa6.48□□□□□ -1.37
SPG11-209ENST00000558253 OR2T8A6NH00 312 aa6.48□□□□□ -1.37
SPG11-209ENST00000558253 SH2D7A6NKC9 451 aaPredicted RBP6.48□□□□□ -1.37
SPG11-209ENST00000558253 M0R2Z0 102 aa6.48□□□□□ -1.37
SPG11-209ENST00000558253 IGHV1-69P01742 117 aa6.48□□□□□ -1.37
SPG11-209ENST00000558253 APOHP02749 345 aaPredicted RBP6.48□□□□□ -1.37
SPG11-209ENST00000558253 GNLYP22749 145 aa6.48□□□□□ -1.37
SPG11-209ENST00000558253 CD24P25063 80 aa6.48□□□□□ -1.37
SPG11-209ENST00000558253 RHOGP84095 191 aa6.48□□□□□ -1.37
SPG11-209ENST00000558253 NDPQ00604 133 aa6.48□□□□□ -1.37
SPG11-209ENST00000558253 ATP5G2Q06055 141 aa6.48□□□□□ -1.37
SPG11-209ENST00000558253 C15orf32Q32M92 178 aa6.48□□□□□ -1.37
SPG11-209ENST00000558253 KLF17Q5JT82 389 aaPredicted RBP6.48□□□□□ -1.37
SPG11-209ENST00000558253 LINC00322Q6ZN03 302 aaPredicted RBP6.48□□□□□ -1.37
SPG11-209ENST00000558253 ZNF493Q6ZR52 646 aa6.48□□□□□ -1.37
SPG11-209ENST00000558253 TCF24Q7RTU0 167 aa6.48□□□□□ -1.37
SPG11-209ENST00000558253 ZC2HC1AQ96GY0 325 aa6.48□□□□□ -1.37
SPG11-209ENST00000558253 METTL26Q96S19 204 aa6.48□□□□□ -1.37
SPG11-209ENST00000558253 HSPB8Q9UJY1 196 aa6.48□□□□□ -1.37
SPG11-209ENST00000558253 MAP1BP46821 2468 aaKnown RBP6.47□□□□□ -1.37
SPG11-209ENST00000558253 ZNF785A8K8V0 405 aa6.47□□□□□ -1.37
SPG11-209ENST00000558253 VWC2LB2RUY7 222 aa6.47□□□□□ -1.37
SPG11-209ENST00000558253 F2Z2F3 143 aa6.47□□□□□ -1.37
SPG11-209ENST00000558253 H3BTX0 84 aa6.47□□□□□ -1.37
SPG11-209ENST00000558253 CRXO43186 299 aaPredicted RBP6.47□□□□□ -1.37
SPG11-209ENST00000558253 IGHV4-39P01824 125 aa6.47□□□□□ -1.37
SPG11-209ENST00000558253 CLEC3BP05452 202 aa6.47□□□□□ -1.37
SPG11-209ENST00000558253 HNRNPA3P51991 378 aaKnown RBP6.47□□□□□ -1.37
SPG11-209ENST00000558253 LCE3BQ5TA77 95 aa6.47□□□□□ -1.37
SPG11-209ENST00000558253 CLEC2AQ6UVW9 174 aa6.47□□□□□ -1.37
SPG11-209ENST00000558253 NIT1Q86X76 327 aa6.47□□□□□ -1.37
SPG11-209ENST00000558253 C5orf56Q8N8D9 126 aa6.47□□□□□ -1.37
SPG11-209ENST00000558253 C10orf105Q8TEF2 133 aa6.47□□□□□ -1.37
SPG11-209ENST00000558253 USMG5Q96IX5 58 aa6.47□□□□□ -1.37
SPG11-209ENST00000558253 ASCL2Q99929 193 aa6.47□□□□□ -1.37
SPG11-209ENST00000558253 ZNF580Q9UK33 172 aa6.47□□□□□ -1.37
SPG11-209ENST00000558253 LAMTOR2Q9Y2Q5 125 aa6.47□□□□□ -1.37
SPG11-209ENST00000558253 ANKHD1Q8IWZ3 2542 aaKnown RBP6.47□□□□□ -1.37
SPG11-209ENST00000558253 TRAV8-1A0A0A6YYK1 113 aa6.46□□□□□ -1.38
SPG11-209ENST00000558253 TRAV41A0A0B4J266 112 aa6.46□□□□□ -1.38
SPG11-209ENST00000558253 FABP5P3A8MUU1 101 aa6.46□□□□□ -1.38
SPG11-209ENST00000558253 K7ERU9 68 aa6.46□□□□□ -1.38
SPG11-209ENST00000558253 ATP6V0E1O15342 81 aa6.46□□□□□ -1.38
SPG11-209ENST00000558253 BUB3O43684 328 aa6.46□□□□□ -1.38
SPG11-209ENST00000558253 IGF1P05019 195 aa6.46□□□□□ -1.38
SPG11-209ENST00000558253 C3orf79P0CE67 100 aa6.46□□□□□ -1.38
SPG11-209ENST00000558253 PSMG4Q5JS54 123 aa6.46□□□□□ -1.38
SPG11-209ENST00000558253 FAM120AOSQ5T036 256 aa6.46□□□□□ -1.38
SPG11-209ENST00000558253 SAMD13Q5VXD3 122 aa6.46□□□□□ -1.38
SPG11-209ENST00000558253 LCN12Q6JVE5 192 aa6.46□□□□□ -1.38
SPG11-209ENST00000558253 RNASEKQ6P5S7 137 aaKnown RBP6.46□□□□□ -1.38
SPG11-209ENST00000558253 SGK494Q96LW2 274 aa6.46□□□□□ -1.38
SPG11-209ENST00000558253 C17orf77Q96MU5 243 aa6.46□□□□□ -1.38
SPG11-209ENST00000558253 RCHY1Q96PM5 261 aa6.46□□□□□ -1.38
SPG11-209ENST00000558253 PRR25Q96S07 402 aa6.46□□□□□ -1.38
SPG11-209ENST00000558253 CCL19Q99731 98 aa6.46□□□□□ -1.38
SPG11-209ENST00000558253 TMEM70Q9BUB7 260 aa6.46□□□□□ -1.38
SPG11-209ENST00000558253 LENEPQ9Y5L5 61 aa6.46□□□□□ -1.38
SPG11-209ENST00000558253 COX11Q9Y6N1 276 aa6.46□□□□□ -1.38
SPG11-209ENST00000558253 U3KQE9 123 aa6.46□□□□□ -1.38
SPG11-209ENST00000558253 BOD1L1Q8NFC6 3051 aa6.45□□□□□ -1.38
SPG11-209ENST00000558253 TRAV9-2A0A087WT02 112 aa6.45□□□□□ -1.38
SPG11-209ENST00000558253 NDUFS7O75251 213 aa6.45□□□□□ -1.38
SPG11-209ENST00000558253 NTF3P20783 257 aa6.45□□□□□ -1.38
SPG11-209ENST00000558253 CTRLP40313 264 aa6.45□□□□□ -1.38
SPG11-209ENST00000558253 HIST1H1AQ02539 215 aaPredicted RBP6.45□□□□□ -1.38
SPG11-209ENST00000558253 C19orf54Q5BKX5 351 aa6.45□□□□□ -1.38
SPG11-209ENST00000558253 Q8N976 141 aa6.45□□□□□ -1.38
SPG11-209ENST00000558253 OR4C5Q8NGB2 326 aa6.45□□□□□ -1.38
SPG11-209ENST00000558253 U3KQK5 164 aa6.45□□□□□ -1.38
SPG11-209ENST00000558253 A0A0G2JLM5 398 aa6.44□□□□□ -1.38
SPG11-209ENST00000558253 C19orf84I3L1E1 186 aa6.44□□□□□ -1.38
SPG11-209ENST00000558253 SH2D1AO60880 128 aa6.44□□□□□ -1.38
SPG11-209ENST00000558253 LEPROTL1O95214 131 aa6.44□□□□□ -1.38
SPG11-209ENST00000558253 SLC25A16P16260 332 aa6.44□□□□□ -1.38
SPG11-209ENST00000558253 GPR183P32249 361 aa6.44□□□□□ -1.38
SPG11-209ENST00000558253 CRIP1P50238 77 aa6.44□□□□□ -1.38
SPG11-209ENST00000558253 ECSCRQ19T08 205 aa6.44□□□□□ -1.38
SPG11-209ENST00000558253 SPATA12Q7Z6I5 190 aa6.44□□□□□ -1.38
SPG11-209ENST00000558253 MAP1LC3CQ9BXW4 147 aa6.44□□□□□ -1.38
SPG11-209ENST00000558253 CNFNQ9BYD5 112 aa6.44□□□□□ -1.38
SPG11-209ENST00000558253 NPFFR1Q9GZQ6 430 aa6.44□□□□□ -1.38
SPG11-209ENST00000558253 TMEM191AQ9H0A3 160 aa6.44□□□□□ -1.38
SPG11-209ENST00000558253 SMAD5-AS1Q9Y6J3 95 aa6.44□□□□□ -1.38
SPG11-209ENST00000558253 PKDREJQ9NTG1 2253 aa6.44□□□□□ -1.38
SPG11-209ENST00000558253 NBEAQ8NFP9 2946 aa6.44□□□□□ -1.38
SPG11-209ENST00000558253 ROS1P08922 2347 aa6.44□□□□□ -1.38
SPG11-209ENST00000558253 PCNX1Q96RV3 2341 aa6.44□□□□□ -1.38
SPG11-209ENST00000558253 TLN1Q9Y490 2541 aaKnown RBP6.43□□□□□ -1.38
SPG11-209ENST00000558253 ZFHX4Q86UP3 3567 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 TRBV7-9A0A0J9YWB2 115 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 TMEM89A2RUT3 159 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 C2orf70A6NJV1 201 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 B4DSR2 109 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 J3QLI3 93 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 M0R3E3 92 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 NDUFA4O00483 81 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 PF4P02776 101 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 MSMBP08118 114 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms