RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 PTPRFP10586 1907 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 EXPH5Q8NEV8 1989 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 TRBV20-1A0A075B6N2 111 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 TRAV12-2A0A075B6T6 113 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 IGHV3-72A0A0B4J1Y9 119 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 TRBV27A0A0K0K1C4 114 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 TCRBV3S1A0A5B6 114 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 GRIFINA4D1Z8 144 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 K7EM74 188 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 PDCD5O14737 125 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 UQCRQO14949 82 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 SYNGR2O43760 224 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 TRACP01848 142 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 APCSP02743 223 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 C1QAP02745 245 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 CD7P09564 240 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 TPT1P13693 172 aaKnown RBP1.62□□□□□ -2.15
SPG11-206ENST00000558093 CSN1S1P47710 185 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 TAS2R45P59539 299 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 ATP5G2Q06055 141 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 LGALS9BQ3B8N2 356 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 Q56UQ5 140 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 KHDC3LQ587J8 217 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 LGALS9CQ6DKI2 356 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 EIF5AL1Q6IS14 154 aaKnown RBP1.62□□□□□ -2.15
SPG11-206ENST00000558093 GUSBP11Q6P575 273 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 MORN3Q6PF18 240 aaPredicted RBP1.62□□□□□ -2.15
SPG11-206ENST00000558093 TMEM91Q6ZNR0 172 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 PHF5AQ7RTV0 110 aaKnown RBP1.62□□□□□ -2.15
SPG11-206ENST00000558093 SPATA12Q7Z6I5 190 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 BPIFA4PQ86YQ2 179 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 ORMDL3Q8N138 153 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 HIST3H2BBQ8N257 126 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 C3orf56Q8N813 242 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 OR4X2Q8NGF9 303 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 OTOSQ8NHW6 89 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 PSMF1Q92530 271 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 LSM10Q969L4 123 aaKnown RBP1.62□□□□□ -2.15
SPG11-206ENST00000558093 LINC00526Q96FQ7 95 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 ZNF714Q96N38 554 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 SPANXDQ9BXN6 97 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 NPCDR1Q9BY65 106 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 AP4S1Q9Y587 144 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 DNAJC15Q9Y5T4 150 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 INO80Q9ULG1 1556 aaPredicted RBP1.62□□□□□ -2.15
SPG11-206ENST00000558093 MAGI2Q86UL8 1455 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 RIMBP3CA6NJZ7 1639 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 RIMBP3BA6NNM3 1639 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 RIMBP3Q9UFD9 1639 aa1.62□□□□□ -2.15
SPG11-206ENST00000558093 NUMA1Q14980 2115 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 KIAA1549Q9HCM3 1950 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 PPRC1Q5VV67 1664 aaKnown RBP1.61□□□□□ -2.15
SPG11-206ENST00000558093 ABCC3O15438 1527 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 DLC1Q96QB1 1528 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 PLXNA3P51805 1871 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 IGHV1OR15-9A0A0B4J2B8 117 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 C3orf85A0A1B0GTC6 90 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 A8MUU9 505 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 MCRIP1C9JLW8 97 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 TMEM262E9PQX1 116 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 H3BT86 120 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 APOC4-APOC2K7ER74 178 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 LEPROTO15243 131 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 OR1I1O60431 355 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 HIST1H2BKO60814 126 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 PITX3O75364 302 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 IGHV3-11P01762 117 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 HBDP02042 147 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 APOC2P02655 101 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 CD3DP04234 171 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 IGKV1-16P04430 117 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 HIST1H2BJP06899 126 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 NMBP08949 121 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 LINC00032P0C843 101 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 TRGC1P0CF51 173 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 HLA-DMBP28068 263 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 RNASE4P34096 147 aaKnown RBP1.61□□□□□ -2.15
SPG11-206ENST00000558093 KISS1Q15726 138 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 TDRG1Q3Y452 100 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 MIC13Q5XKP0 118 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 C7orf65Q6ZTY9 151 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 MORN4Q8NDC4 146 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 OR5AK2Q8NH90 309 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 LINC01560Q8TB33 94 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 C10orf82Q8WW14 230 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 S100ZQ8WXG8 99 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 MRPS24Q96EL2 167 aaKnown RBP1.61□□□□□ -2.15
SPG11-206ENST00000558093 S100A13Q99584 98 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 SHANK2-AS3Q9BTD1 123 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 TTTY13Q9BZ97 58 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 C8orf17Q9NRJ1 99 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 OSTCQ9NRP0 149 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 SMCO4Q9NRQ5 59 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 TMEM106BQ9NUM4 274 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 KLK5Q9Y337 293 aaPredicted RBP1.61□□□□□ -2.15
SPG11-206ENST00000558093 LINC00588Q9Y4M8 146 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 STRCQ7RTU9 1775 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 SCN11AQ9UI33 1791 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 TMEM131LA2VDJ0 1609 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 CFTRP13569 1480 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms