RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 COX8AP10176 69 aa9.72□□□□□ -0.85
LDLR-205ENST00000557933 KIR3DS1Q14943 382 aa9.72□□□□□ -0.85
LDLR-205ENST00000557933 TWIST1Q15672 202 aa9.72□□□□□ -0.85
LDLR-205ENST00000557933 LINC01545Q5VT33 79 aa9.72□□□□□ -0.85
LDLR-205ENST00000557933 PET117Q6UWS5 81 aa9.72□□□□□ -0.85
LDLR-205ENST00000557933 OR10AG1Q8NH19 301 aa9.72□□□□□ -0.85
LDLR-205ENST00000557933 PRELID3AQ96N28 172 aa9.72□□□□□ -0.85
LDLR-205ENST00000557933 NGBQ9NPG2 151 aa9.72□□□□□ -0.85
LDLR-205ENST00000557933 ONECUT1Q9UBC0 465 aa9.72□□□□□ -0.85
LDLR-205ENST00000557933 AGRNO00468 2067 aa9.71□□□□□ -0.85
LDLR-205ENST00000557933 IGHV1-3A0A0C4DH29 117 aa9.71□□□□□ -0.85
LDLR-205ENST00000557933 THBDP07204 575 aa9.71□□□□□ -0.85
LDLR-205ENST00000557933 RPEQ96AT9 228 aa9.71□□□□□ -0.85
LDLR-205ENST00000557933 LINC00574Q9H8X3 128 aa9.71□□□□□ -0.85
LDLR-205ENST00000557933 CENPEQ02224 2701 aa9.71□□□□□ -0.86
LDLR-205ENST00000557933 J3KRW8 73 aa9.71□□□□□ -0.86
LDLR-205ENST00000557933 CSN1S1P47710 185 aa9.71□□□□□ -0.86
LDLR-205ENST00000557933 Q6ZQT7 251 aa9.71□□□□□ -0.86
LDLR-205ENST00000557933 OTORQ9NRC9 128 aa9.71□□□□□ -0.86
LDLR-205ENST00000557933 SPTBN4Q9H254 2564 aa9.71□□□□□ -0.86
LDLR-205ENST00000557933 TRBV19A0A075B6N1 114 aa9.7□□□□□ -0.86
LDLR-205ENST00000557933 HAX1O00165 279 aa9.7□□□□□ -0.86
LDLR-205ENST00000557933 TIMM23O14925 209 aa9.7□□□□□ -0.86
LDLR-205ENST00000557933 CRYGCP07315 174 aa9.7□□□□□ -0.86
LDLR-205ENST00000557933 GCSHP23434 173 aa9.7□□□□□ -0.86
LDLR-205ENST00000557933 ZNF80P51504 273 aaPredicted RBP9.7□□□□□ -0.86
LDLR-205ENST00000557933 SIGLEC15Q6ZMC9 328 aa9.7□□□□□ -0.86
LDLR-205ENST00000557933 IGKV2D-26A0A0A0MRZ7 120 aa9.7□□□□□ -0.86
LDLR-205ENST00000557933 C16orf97H3BN30 126 aa9.7□□□□□ -0.86
LDLR-205ENST00000557933 CT45A10P0DMU9 189 aa9.7□□□□□ -0.86
LDLR-205ENST00000557933 MEF2CQ06413 473 aaPredicted RBP9.7□□□□□ -0.86
LDLR-205ENST00000557933 PEF1Q9UBV8 284 aaKnown RBP9.7□□□□□ -0.86
LDLR-205ENST00000557933 CELSR2Q9HCU4 2923 aa9.7□□□□□ -0.86
LDLR-205ENST00000557933 CD5LO43866 347 aa9.69□□□□□ -0.86
LDLR-205ENST00000557933 CKS2P33552 79 aa9.69□□□□□ -0.86
LDLR-205ENST00000557933 RPL24P83731 157 aaKnown RBP9.69□□□□□ -0.86
LDLR-205ENST00000557933 RIGQ13278 110 aa9.69□□□□□ -0.86
LDLR-205ENST00000557933 RNF125Q96EQ8 232 aa9.69□□□□□ -0.86
LDLR-205ENST00000557933 VGLL1Q99990 258 aa9.69□□□□□ -0.86
LDLR-205ENST00000557933 ZNF492Q9P255 531 aa9.69□□□□□ -0.86
LDLR-205ENST00000557933 NOTCH3Q9UM47 2321 aa9.69□□□□□ -0.86
LDLR-205ENST00000557933 SH2D1AO60880 128 aa9.69□□□□□ -0.86
LDLR-205ENST00000557933 FGF6P10767 208 aa9.69□□□□□ -0.86
LDLR-205ENST00000557933 ERCC8Q13216 396 aa9.69□□□□□ -0.86
LDLR-205ENST00000557933 MRPL51Q4U2R6 128 aaKnown RBP9.69□□□□□ -0.86
LDLR-205ENST00000557933 TMEM155Q4W5P6 130 aa9.69□□□□□ -0.86
LDLR-205ENST00000557933 SORL1Q92673 2214 aa9.69□□□□□ -0.86
LDLR-205ENST00000557933 NPIPB6E9PJ23 425 aa9.69□□□□□ -0.86
LDLR-205ENST00000557933 I3L2K1 104 aa9.69□□□□□ -0.86
LDLR-205ENST00000557933 ORM1P02763 201 aa9.69□□□□□ -0.86
LDLR-205ENST00000557933 ATP5IP56385 69 aaPredicted RBP9.69□□□□□ -0.86
LDLR-205ENST00000557933 OR4A5Q8NH83 315 aa9.69□□□□□ -0.86
LDLR-205ENST00000557933 RNASE6Q93091 150 aaKnown RBP9.69□□□□□ -0.86
LDLR-205ENST00000557933 TMEM189A5PLL7 270 aa9.68□□□□□ -0.86
LDLR-205ENST00000557933 K7EIM0 57 aa9.68□□□□□ -0.86
LDLR-205ENST00000557933 EGR2P11161 476 aaPredicted RBP9.68□□□□□ -0.86
LDLR-205ENST00000557933 PSG3Q16557 428 aa9.68□□□□□ -0.86
LDLR-205ENST00000557933 RNF182Q8N6D2 247 aa9.68□□□□□ -0.86
LDLR-205ENST00000557933 ZNF491Q8N8L2 437 aa9.68□□□□□ -0.86
LDLR-205ENST00000557933 ZNF414Q96IQ9 312 aa9.68□□□□□ -0.86
LDLR-205ENST00000557933 TRAV26-2A0A0B4J265 109 aa9.68□□□□□ -0.86
LDLR-205ENST00000557933 A0A0G2JLM5 398 aa9.68□□□□□ -0.86
LDLR-205ENST00000557933 GNG7O60262 68 aa9.68□□□□□ -0.86
LDLR-205ENST00000557933 DLX6P56179 175 aa9.68□□□□□ -0.86
LDLR-205ENST00000557933 FER1L6-AS1Q8NA97 138 aa9.68□□□□□ -0.86
LDLR-205ENST00000557933 LINC01560Q8TB33 94 aa9.68□□□□□ -0.86
LDLR-205ENST00000557933 DOPEY2Q9Y3R5 2298 aa9.67□□□□□ -0.86
LDLR-205ENST00000557933 NCBP2LA6PVI3 153 aaKnown RBP9.67□□□□□ -0.86
LDLR-205ENST00000557933 GRNP28799 593 aaKnown RBP9.67□□□□□ -0.86
LDLR-205ENST00000557933 MC5RP33032 325 aa9.67□□□□□ -0.86
LDLR-205ENST00000557933 CT83Q5H943 113 aa9.67□□□□□ -0.86
LDLR-205ENST00000557933 SFTA2Q6UW10 78 aa9.67□□□□□ -0.86
LDLR-205ENST00000557933 GTSCR1Q86UQ5 136 aa9.67□□□□□ -0.86
LDLR-205ENST00000557933 E7EQL1 145 aa9.67□□□□□ -0.86
LDLR-205ENST00000557933 LGALS7P47929 136 aa9.67□□□□□ -0.86
LDLR-205ENST00000557933 A1L4Q6 167 aa9.66□□□□□ -0.86
LDLR-205ENST00000557933 BUB1B-PAK6H3BSN5 160 aa9.66□□□□□ -0.86
LDLR-205ENST00000557933 FXYD2P54710 66 aa9.66□□□□□ -0.86
LDLR-205ENST00000557933 FAM169BQ8N8A8 192 aa9.66□□□□□ -0.86
LDLR-205ENST00000557933 OR1N2Q8NGR9 330 aa9.66□□□□□ -0.86
LDLR-205ENST00000557933 GFRA4Q9GZZ7 299 aa9.66□□□□□ -0.86
LDLR-205ENST00000557933 KLK15Q9H2R5 256 aa9.66□□□□□ -0.86
LDLR-205ENST00000557933 NCOR1P1Q9H4R4 102 aa9.66□□□□□ -0.86
LDLR-205ENST00000557933 K7ERU9 68 aa9.66□□□□□ -0.86
LDLR-205ENST00000557933 PRSS1P07477 247 aa9.66□□□□□ -0.86
LDLR-205ENST00000557933 FAM162BQ5T6X4 162 aa9.66□□□□□ -0.86
LDLR-205ENST00000557933 IFI27L1Q96BM0 104 aa9.66□□□□□ -0.86
LDLR-205ENST00000557933 CSTL1Q9H114 145 aa9.66□□□□□ -0.86
LDLR-205ENST00000557933 SPCS1Q9Y6A9 102 aa9.66□□□□□ -0.86
LDLR-205ENST00000557933 CSPG4Q6UVK1 2322 aa9.66□□□□□ -0.86
LDLR-205ENST00000557933 FCER1GP30273 86 aa9.66□□□□□ -0.86
LDLR-205ENST00000557933 GFRALQ6UXV0 394 aa9.66□□□□□ -0.86
LDLR-205ENST00000557933 ORMDL3Q8N138 153 aa9.66□□□□□ -0.86
LDLR-205ENST00000557933 SHANK2-AS3Q9BTD1 123 aa9.66□□□□□ -0.86
LDLR-205ENST00000557933 PPIAL4CA0A0B4J2A2 164 aa9.65□□□□□ -0.86
LDLR-205ENST00000557933 PRAC2D3DTV9 90 aa9.65□□□□□ -0.86
LDLR-205ENST00000557933 PPIAL4GP0DN37 164 aa9.65□□□□□ -0.86
LDLR-205ENST00000557933 FAM104BQ5XKR9 115 aa9.65□□□□□ -0.86
LDLR-205ENST00000557933 FAM71F2Q6NXP2 309 aa9.65□□□□□ -0.86
LDLR-205ENST00000557933 OR2K2Q8NGT1 345 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms