RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 GABARAPH6UMI1 98 aa5.88□□□□□ -1.47
NEDD1-211ENST00000557454 GABARAPO95166 117 aa5.88□□□□□ -1.47
NEDD1-211ENST00000557454 MYL9P24844 172 aa5.88□□□□□ -1.47
NEDD1-211ENST00000557454 CIRBPQ14011 172 aaKnown RBP5.88□□□□□ -1.47
NEDD1-211ENST00000557454 NOXA1Q86UR1 476 aa5.88□□□□□ -1.47
NEDD1-211ENST00000557454 CCDC197Q8NCU1 140 aa5.88□□□□□ -1.47
NEDD1-211ENST00000557454 OR10P1Q8NGE3 313 aa5.88□□□□□ -1.47
NEDD1-211ENST00000557454 OR10G4Q8NGN3 311 aa5.88□□□□□ -1.47
NEDD1-211ENST00000557454 OR5H2Q8NGV7 314 aa5.88□□□□□ -1.47
NEDD1-211ENST00000557454 C7orf33Q8WU49 177 aa5.88□□□□□ -1.47
NEDD1-211ENST00000557454 TRGV9Q99603 122 aa5.88□□□□□ -1.47
NEDD1-211ENST00000557454 TMEM147Q9BVK8 224 aa5.88□□□□□ -1.47
NEDD1-211ENST00000557454 AUNIPQ9H7T9 357 aa5.88□□□□□ -1.47
NEDD1-211ENST00000557454 A0A087X0K7 114 aa5.87□□□□□ -1.47
NEDD1-211ENST00000557454 CRYM-AS1A6NIL9 109 aa5.87□□□□□ -1.47
NEDD1-211ENST00000557454 H3BRN7 92 aa5.87□□□□□ -1.47
NEDD1-211ENST00000557454 RPL7P18124 248 aaKnown RBP5.87□□□□□ -1.47
NEDD1-211ENST00000557454 BTN1A1Q13410 526 aa5.87□□□□□ -1.47
NEDD1-211ENST00000557454 LCE3BQ5TA77 95 aa5.87□□□□□ -1.47
NEDD1-211ENST00000557454 SPINK6Q6UWN8 80 aa5.87□□□□□ -1.47
NEDD1-211ENST00000557454 SDIM1Q6ZPB5 146 aa5.87□□□□□ -1.47
NEDD1-211ENST00000557454 FAM219AQ8IW50 185 aa5.87□□□□□ -1.47
NEDD1-211ENST00000557454 C9orf163Q8N9P6 203 aa5.87□□□□□ -1.47
NEDD1-211ENST00000557454 ODF3Q96PU9 254 aa5.87□□□□□ -1.47
NEDD1-211ENST00000557454 ACOT13Q9NPJ3 140 aa5.87□□□□□ -1.47
NEDD1-211ENST00000557454 MED4Q9NPJ6 270 aa5.87□□□□□ -1.47
NEDD1-211ENST00000557454 PLCXD1Q9NUJ7 323 aa5.87□□□□□ -1.47
NEDD1-211ENST00000557454 TMEM127O75204 238 aa5.86□□□□□ -1.47
NEDD1-211ENST00000557454 SLC25A5P05141 298 aaKnown RBP5.86□□□□□ -1.47
NEDD1-211ENST00000557454 PFN1P07737 140 aaKnown RBP5.86□□□□□ -1.47
NEDD1-211ENST00000557454 CHTF8P0CG12 524 aa5.86□□□□□ -1.47
NEDD1-211ENST00000557454 LPCAT3Q6P1A2 487 aa5.86□□□□□ -1.47
NEDD1-211ENST00000557454 SLC25A38Q96DW6 304 aa5.86□□□□□ -1.47
NEDD1-211ENST00000557454 DPH3Q96FX2 82 aa5.86□□□□□ -1.47
NEDD1-211ENST00000557454 ARPC5LQ9BPX5 153 aa5.86□□□□□ -1.47
NEDD1-211ENST00000557454 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.86□□□□□ -1.47
NEDD1-211ENST00000557454 IGHV3-16A0A0C4DH30 117 aa5.85□□□□□ -1.47
NEDD1-211ENST00000557454 H7C1H1 209 aa5.85□□□□□ -1.47
NEDD1-211ENST00000557454 MPDU1O75352 247 aa5.85□□□□□ -1.47
NEDD1-211ENST00000557454 CFDP00746 253 aaPredicted RBP5.85□□□□□ -1.47
NEDD1-211ENST00000557454 SNRPCP09234 159 aaKnown RBP5.85□□□□□ -1.47
NEDD1-211ENST00000557454 GNAO1P09471 354 aa5.85□□□□□ -1.47
NEDD1-211ENST00000557454 TAS2R46P59540 309 aa5.85□□□□□ -1.47
NEDD1-211ENST00000557454 MEF2DQ14814 521 aa5.85□□□□□ -1.47
NEDD1-211ENST00000557454 SP6Q3SY56 376 aa5.85□□□□□ -1.47
NEDD1-211ENST00000557454 GGNBP1Q5YKI7 109 aa5.85□□□□□ -1.47
NEDD1-211ENST00000557454 DPPA3Q6W0C5 159 aa5.85□□□□□ -1.47
NEDD1-211ENST00000557454 TMEM182Q6ZP80 229 aaPredicted RBP5.85□□□□□ -1.47
NEDD1-211ENST00000557454 BPIFCQ8NFQ6 507 aa5.85□□□□□ -1.47
NEDD1-211ENST00000557454 KRTAP4-12Q9BQ66 201 aa5.85□□□□□ -1.47
NEDD1-211ENST00000557454 SHANK2-AS3Q9BTD1 123 aa5.85□□□□□ -1.47
NEDD1-211ENST00000557454 ZNF331Q9NQX6 463 aaPredicted RBP5.85□□□□□ -1.47
NEDD1-211ENST00000557454 ANAPC10Q9UM13 185 aa5.85□□□□□ -1.47
NEDD1-211ENST00000557454 SSR3Q9UNL2 185 aa5.85□□□□□ -1.47
NEDD1-211ENST00000557454 TRAV26-2A0A0B4J265 109 aa5.84□□□□□ -1.47
NEDD1-211ENST00000557454 TRAV4A0A0B4J268 109 aa5.84□□□□□ -1.47
NEDD1-211ENST00000557454 KRTAP4-8A0A0G2JLE6 195 aa5.84□□□□□ -1.47
NEDD1-211ENST00000557454 PTGES3LE9PB15 166 aa5.84□□□□□ -1.47
NEDD1-211ENST00000557454 PRSS1P07477 247 aa5.84□□□□□ -1.47
NEDD1-211ENST00000557454 PGAM2P15259 253 aa5.84□□□□□ -1.47
NEDD1-211ENST00000557454 RNASE4P34096 147 aaKnown RBP5.84□□□□□ -1.47
NEDD1-211ENST00000557454 GPX4P36969 197 aaPredicted RBP5.84□□□□□ -1.47
NEDD1-211ENST00000557454 MLLT11Q13015 90 aaPredicted RBP5.84□□□□□ -1.47
NEDD1-211ENST00000557454 VWC2Q2TAL6 325 aa5.84□□□□□ -1.47
NEDD1-211ENST00000557454 Q6ZQT7 251 aa5.84□□□□□ -1.47
NEDD1-211ENST00000557454 LGI3Q8N145 548 aa5.84□□□□□ -1.47
NEDD1-211ENST00000557454 GTSF1Q8WW33 167 aa5.84□□□□□ -1.47
NEDD1-211ENST00000557454 GTSF1LQ9H1H1 148 aa5.84□□□□□ -1.47
NEDD1-211ENST00000557454 IGHV1OR15-1A0A075B7D0 117 aa5.83□□□□□ -1.48
NEDD1-211ENST00000557454 C3orf85A0A1B0GTC6 90 aa5.83□□□□□ -1.48
NEDD1-211ENST00000557454 PMS2P5A8MQ11 134 aa5.83□□□□□ -1.48
NEDD1-211ENST00000557454 KLLNB2CW77 178 aa5.83□□□□□ -1.48
NEDD1-211ENST00000557454 USP17L23D6RBM5 183 aa5.83□□□□□ -1.48
NEDD1-211ENST00000557454 H3BTX0 84 aa5.83□□□□□ -1.48
NEDD1-211ENST00000557454 SLC17A3O00476 420 aa5.83□□□□□ -1.48
NEDD1-211ENST00000557454 CIB2O75838 187 aa5.83□□□□□ -1.48
NEDD1-211ENST00000557454 GATA1P15976 413 aaPredicted RBP5.83□□□□□ -1.48
NEDD1-211ENST00000557454 HLA-DMAP28067 261 aa5.83□□□□□ -1.48
NEDD1-211ENST00000557454 S100A7P31151 101 aa5.83□□□□□ -1.48
NEDD1-211ENST00000557454 PIGPP57054 158 aa5.83□□□□□ -1.48
NEDD1-211ENST00000557454 RND3P61587 244 aa5.83□□□□□ -1.48
NEDD1-211ENST00000557454 TSPAN5P62079 268 aa5.83□□□□□ -1.48
NEDD1-211ENST00000557454 RNF151Q2KHN1 245 aa5.83□□□□□ -1.48
NEDD1-211ENST00000557454 DGAT2L7PQ6IED9 249 aa5.83□□□□□ -1.48
NEDD1-211ENST00000557454 OR5H6Q8NGV6 325 aa5.83□□□□□ -1.48
NEDD1-211ENST00000557454 SPACA4Q8TDM5 124 aa5.83□□□□□ -1.48
NEDD1-211ENST00000557454 UBE2WQ96B02 151 aa5.83□□□□□ -1.48
NEDD1-211ENST00000557454 RNF185Q96GF1 192 aa5.83□□□□□ -1.48
NEDD1-211ENST00000557454 TMEM222Q9H0R3 208 aa5.83□□□□□ -1.48
NEDD1-211ENST00000557454 PLAC8Q9NZF1 115 aa5.83□□□□□ -1.48
NEDD1-211ENST00000557454 U3KQ87 197 aa5.83□□□□□ -1.48
NEDD1-211ENST00000557454 FAM231BA6NCW3 169 aa5.82□□□□□ -1.48
NEDD1-211ENST00000557454 FABP12A6NFH5 140 aa5.82□□□□□ -1.48
NEDD1-211ENST00000557454 TAAR5O14804 337 aa5.82□□□□□ -1.48
NEDD1-211ENST00000557454 CXCL2P19875 107 aa5.82□□□□□ -1.48
NEDD1-211ENST00000557454 UCP3P55916 312 aa5.82□□□□□ -1.48
NEDD1-211ENST00000557454 RPL19P84098 196 aaKnown RBP5.82□□□□□ -1.48
NEDD1-211ENST00000557454 GPR107Q5VW38 600 aa5.82□□□□□ -1.48
NEDD1-211ENST00000557454 C22orf42Q6IC83 251 aa5.82□□□□□ -1.48
NEDD1-211ENST00000557454 ZFP1Q6P2D0 407 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms