RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 CTSGP08311 255 aa13.81□□□□□ -0.2
XRCC3-218ENST00000557439 TMEM11P17152 192 aa13.81□□□□□ -0.2
XRCC3-218ENST00000557439 ZNF80P51504 273 aaPredicted RBP13.81□□□□□ -0.2
XRCC3-218ENST00000557439 RIGQ13278 110 aa13.81□□□□□ -0.2
XRCC3-218ENST00000557439 AMN1Q8IY45 258 aa13.81□□□□□ -0.2
XRCC3-218ENST00000557439 SMAD5-AS1Q9Y6J3 95 aa13.81□□□□□ -0.2
XRCC3-218ENST00000557439 M0R1W7 72 aa13.81□□□□□ -0.2
XRCC3-218ENST00000557439 CT45A10P0DMU9 189 aa13.81□□□□□ -0.2
XRCC3-218ENST00000557439 IFI27P40305 119 aaPredicted RBP13.81□□□□□ -0.2
XRCC3-218ENST00000557439 TCTAP57738 103 aa13.81□□□□□ -0.2
XRCC3-218ENST00000557439 FOXE3Q13461 319 aa13.81□□□□□ -0.2
XRCC3-218ENST00000557439 IGHV7-81A0A0B4J1V7 117 aa13.8□□□□□ -0.2
XRCC3-218ENST00000557439 NPIPB5A8MRT5 1133 aa13.8□□□□□ -0.2
XRCC3-218ENST00000557439 SMKR1H3BMG3 65 aa13.8□□□□□ -0.2
XRCC3-218ENST00000557439 TCF21O43680 179 aa13.8□□□□□ -0.2
XRCC3-218ENST00000557439 ECSCRQ19T08 205 aa13.8□□□□□ -0.2
XRCC3-218ENST00000557439 TRBV6-1A0A0K0K1D8 114 aa13.8□□□□□ -0.2
XRCC3-218ENST00000557439 D6R8Y8 96 aa13.8□□□□□ -0.2
XRCC3-218ENST00000557439 CRXO43186 299 aaPredicted RBP13.8□□□□□ -0.2
XRCC3-218ENST00000557439 RELQ04864 619 aaPredicted RBP13.8□□□□□ -0.2
XRCC3-218ENST00000557439 LYPD1Q8N2G4 141 aa13.8□□□□□ -0.2
XRCC3-218ENST00000557439 TTC9CQ8N5M4 171 aa13.8□□□□□ -0.2
XRCC3-218ENST00000557439 LINC01548A6NM66 108 aa13.79□□□□□ -0.2
XRCC3-218ENST00000557439 MRPS16Q9Y3D3 137 aaKnown RBP13.79□□□□□ -0.2
XRCC3-218ENST00000557439 IGHV3-49A0A0A0MS15 119 aa13.79□□□□□ -0.2
XRCC3-218ENST00000557439 TMEM189A5PLL7 270 aa13.79□□□□□ -0.2
XRCC3-218ENST00000557439 SNAI2O43623 268 aa13.79□□□□□ -0.2
XRCC3-218ENST00000557439 IGHG4P01861 327 aa13.79□□□□□ -0.2
XRCC3-218ENST00000557439 GPR183P32249 361 aa13.79□□□□□ -0.2
XRCC3-218ENST00000557439 Q8N6K4 173 aa13.79□□□□□ -0.2
XRCC3-218ENST00000557439 PRSS3P2Q8NHM4 247 aa13.79□□□□□ -0.2
XRCC3-218ENST00000557439 AP5S1Q9NUS5 200 aa13.79□□□□□ -0.2
XRCC3-218ENST00000557439 RNF24Q9Y225 148 aa13.79□□□□□ -0.2
XRCC3-218ENST00000557439 MSRB2Q9Y3D2 182 aa13.79□□□□□ -0.2
XRCC3-218ENST00000557439 GAGE1Q13065 139 aa13.78□□□□□ -0.2
XRCC3-218ENST00000557439 MPV17L2Q567V2 206 aa13.78□□□□□ -0.2
XRCC3-218ENST00000557439 FAM162BQ5T6X4 162 aa13.78□□□□□ -0.2
XRCC3-218ENST00000557439 MAP1LC3CQ9BXW4 147 aa13.78□□□□□ -0.2
XRCC3-218ENST00000557439 TRAV30A0A087WSZ9 112 aa13.78□□□□□ -0.2
XRCC3-218ENST00000557439 OR5AL1P0C617 328 aa13.78□□□□□ -0.2
XRCC3-218ENST00000557439 CSN1S1P47710 185 aa13.78□□□□□ -0.2
XRCC3-218ENST00000557439 ERCC8Q13216 396 aa13.78□□□□□ -0.2
XRCC3-218ENST00000557439 RNF182Q8N6D2 247 aa13.78□□□□□ -0.2
XRCC3-218ENST00000557439 Q8N9W7 124 aa13.78□□□□□ -0.2
XRCC3-218ENST00000557439 PRAC2D3DTV9 90 aa13.77□□□□□ -0.21
XRCC3-218ENST00000557439 KLRB1Q12918 225 aa13.77□□□□□ -0.21
XRCC3-218ENST00000557439 PRR25Q96S07 402 aa13.77□□□□□ -0.21
XRCC3-218ENST00000557439 MSRB1Q9NZV6 116 aa13.77□□□□□ -0.21
XRCC3-218ENST00000557439 G3V318 75 aa13.77□□□□□ -0.21
XRCC3-218ENST00000557439 FA2HQ7L5A8 372 aa13.77□□□□□ -0.21
XRCC3-218ENST00000557439 A0A096LNJ9 63 aa13.76□□□□□ -0.21
XRCC3-218ENST00000557439 ZNF207O43670 478 aaKnown RBP13.76□□□□□ -0.21
XRCC3-218ENST00000557439 C15orf32Q32M92 178 aa13.76□□□□□ -0.21
XRCC3-218ENST00000557439 OR8A1Q8NGG7 326 aa13.76□□□□□ -0.21
XRCC3-218ENST00000557439 TMEM191AQ9H0A3 160 aa13.76□□□□□ -0.21
XRCC3-218ENST00000557439 UBTD1Q9HAC8 227 aa13.76□□□□□ -0.21
XRCC3-218ENST00000557439 PPIFP30405 207 aaKnown RBP13.76□□□□□ -0.21
XRCC3-218ENST00000557439 PDE6HQ13956 83 aa13.76□□□□□ -0.21
XRCC3-218ENST00000557439 SIGLEC8Q9NYZ4 499 aa13.76□□□□□ -0.21
XRCC3-218ENST00000557439 RABAC1Q9UI14 185 aa13.76□□□□□ -0.21
XRCC3-218ENST00000557439 C20orf202A1L168 122 aa13.75□□□□□ -0.21
XRCC3-218ENST00000557439 PRSS47A8MTI9 375 aa13.75□□□□□ -0.21
XRCC3-218ENST00000557439 GAS8-AS1O95177 125 aa13.75□□□□□ -0.21
XRCC3-218ENST00000557439 CCDC144NLQ6NUI1 221 aa13.75□□□□□ -0.21
XRCC3-218ENST00000557439 ZNF575Q86XF7 245 aa13.75□□□□□ -0.21
XRCC3-218ENST00000557439 ZNF747Q9BV97 191 aa13.75□□□□□ -0.21
XRCC3-218ENST00000557439 IGHV3OR16-10A0A075B7F0 116 aa13.75□□□□□ -0.21
XRCC3-218ENST00000557439 ATP6V0E1O15342 81 aa13.75□□□□□ -0.21
XRCC3-218ENST00000557439 CCL25O15444 150 aa13.75□□□□□ -0.21
XRCC3-218ENST00000557439 CLEC3BP05452 202 aa13.75□□□□□ -0.21
XRCC3-218ENST00000557439 RPL7P18124 248 aaKnown RBP13.75□□□□□ -0.21
XRCC3-218ENST00000557439 LY6DQ14210 128 aa13.75□□□□□ -0.21
XRCC3-218ENST00000557439 WFDC3Q8IUB2 231 aa13.75□□□□□ -0.21
XRCC3-218ENST00000557439 SIRPDQ9H106 197 aa13.75□□□□□ -0.21
XRCC3-218ENST00000557439 THYN1Q9P016 225 aa13.75□□□□□ -0.21
XRCC3-218ENST00000557439 NUDT3O95989 172 aa13.74□□□□□ -0.21
XRCC3-218ENST00000557439 MRPL51Q4U2R6 128 aaKnown RBP13.74□□□□□ -0.21
XRCC3-218ENST00000557439 AJUBAQ96IF1 538 aa13.74□□□□□ -0.21
XRCC3-218ENST00000557439 PRELID3AQ96N28 172 aa13.74□□□□□ -0.21
XRCC3-218ENST00000557439 ST20Q9HBF5 79 aa13.74□□□□□ -0.21
XRCC3-218ENST00000557439 LINC00527Q9UJ94 153 aa13.74□□□□□ -0.21
XRCC3-218ENST00000557439 HSPB8Q9UJY1 196 aa13.74□□□□□ -0.21
XRCC3-218ENST00000557439 A0A087X0K7 114 aa13.73□□□□□ -0.21
XRCC3-218ENST00000557439 PSG9Q00887 426 aa13.73□□□□□ -0.21
XRCC3-218ENST00000557439 TWIST1Q15672 202 aa13.73□□□□□ -0.21
XRCC3-218ENST00000557439 FAM104BQ5XKR9 115 aa13.73□□□□□ -0.21
XRCC3-218ENST00000557439 ORM1P02763 201 aa13.73□□□□□ -0.21
XRCC3-218ENST00000557439 SAA4P35542 130 aa13.73□□□□□ -0.21
XRCC3-218ENST00000557439 RHOGP84095 191 aa13.73□□□□□ -0.21
XRCC3-218ENST00000557439 PET117Q6UWS5 81 aa13.73□□□□□ -0.21
XRCC3-218ENST00000557439 CLEC19AQ6UXS0 136 aa13.73□□□□□ -0.21
XRCC3-218ENST00000557439 PIP4P2Q8N4L2 257 aa13.73□□□□□ -0.21
XRCC3-218ENST00000557439 ZNF48Q96MX3 618 aaPredicted RBP13.73□□□□□ -0.21
XRCC3-218ENST00000557439 SCRT2Q9NQ03 307 aa13.73□□□□□ -0.21
XRCC3-218ENST00000557439 ITPR1Q14643 2758 aa13.72□□□□□ -0.21
XRCC3-218ENST00000557439 SLC25A34Q6PIV7 304 aa13.72□□□□□ -0.21
XRCC3-218ENST00000557439 GATD1Q8NB37 220 aa13.72□□□□□ -0.21
XRCC3-218ENST00000557439 COX11Q9Y6N1 276 aa13.72□□□□□ -0.21
XRCC3-218ENST00000557439 HSBP1L1C9JCN9 74 aa13.72□□□□□ -0.21
XRCC3-218ENST00000557439 NPYP01303 97 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 185.3 ms