RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 OR5AC2Q9NZP5 309 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 GSKIPQ9P0R6 139 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 TIMM9Q9Y5J7 89 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 INSIG2Q9Y5U4 225 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 CSMD2Q7Z408 3487 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 SORL1Q92673 2214 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 TRAV1-1A0A0B4J248 108 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 BTBD17A6NE02 478 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 RNASEK-C17orf49H0YIS7 233 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 H7C2Y5 167 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 CORTO00230 105 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 FGF16O43320 207 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 CHST1O43916 411 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 SSSCA1O60232 199 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 LY6HO94772 140 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 BRI3O95415 125 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 TMEM50AO95807 157 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 CRYZL1O95825 349 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 MOSP00540 346 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 KRASP01116 189 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 IGKV1-16P04430 117 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 MSMBP08118 114 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 NMBP08949 121 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 SAA1P0DJI8 122 aaPredicted RBP2.05□□□□□ -2.08
VRK1-207ENST00000557352 BRS3P32247 399 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 G6PCP35575 357 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 HTR2BP41595 481 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 GNG10P50151 68 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 SULT1A2P50226 295 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 S100A10P60903 97 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 RAB14P61106 215 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 POLR2GP62487 172 aaKnown RBP eCLIP2.05□□□□□ -2.08
VRK1-207ENST00000557352 SSX2Q16385 188 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 TMEM249Q2WGJ8 235 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 DEFB113Q30KQ7 82 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 AVPI1Q5T686 147 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 TPTE2P1Q5T6R2 138 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 UQCC3Q6UW78 93 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 VMO1Q7Z5L0 202 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 COMMD1Q8N668 190 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 OR1S2Q8NGQ3 325 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 OR1L6Q8NGR2 347 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 OR2T10Q8NGZ9 312 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 RNASE11Q8TAA1 199 aaKnown RBP2.05□□□□□ -2.08
VRK1-207ENST00000557352 UBALD1Q8TB05 177 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 RNASEH2CQ8TDP1 164 aaKnown RBP2.05□□□□□ -2.08
VRK1-207ENST00000557352 DTD1Q8TEA8 209 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 CACNG8Q8WXS5 425 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 ATP5SQ99766 215 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 TMEM147Q9BVK8 224 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 SMDT1Q9H4I9 107 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 NDUFA4L2Q9NRX3 87 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 KCNIP2Q9NS61 270 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 SIGLEC9Q9Y336 463 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 LSM5Q9Y4Y9 91 aaKnown RBP2.05□□□□□ -2.08
VRK1-207ENST00000557352 FLNBO75369 2602 aaKnown RBP2.05□□□□□ -2.08
VRK1-207ENST00000557352 BAHCC1Q9P281 2608 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 F8P00451 2351 aa2.05□□□□□ -2.08
VRK1-207ENST00000557352 AKAP9Q99996 3911 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 IGHV1-69DA0A0B4J2H0 117 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 A0A1B0GW64 132 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 A0A1W2PPE3 182 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 IGLC7A0M8Q6 106 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 IGSF23A1L1A6 192 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 RAB19A4D1S5 217 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 RBMY1BA6NDE4 496 aaKnown RBP2.04□□□□□ -2.08
VRK1-207ENST00000557352 RBMY1EA6NEQ0 496 aaKnown RBP2.04□□□□□ -2.08
VRK1-207ENST00000557352 M0QZK8 103 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 NPFFO15130 113 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 CFDP00746 253 aaPredicted RBP2.04□□□□□ -2.08
VRK1-207ENST00000557352 IGHV1-69P01742 117 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 HLA-DRB1P01911 266 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 MBP02144 154 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 FN1P02751 2386 aaKnown RBP2.04□□□□□ -2.08
VRK1-207ENST00000557352 CRYGCP07315 174 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 RBMY1DP0C7P1 496 aaKnown RBP2.04□□□□□ -2.08
VRK1-207ENST00000557352 RBMY1A1P0DJD3 496 aaKnown RBP2.04□□□□□ -2.08
VRK1-207ENST00000557352 S100A1P23297 94 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 NPY1RP25929 384 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 GPX4P36969 197 aaPredicted RBP2.04□□□□□ -2.08
VRK1-207ENST00000557352 TAGLN2P37802 199 aaKnown RBP2.04□□□□□ -2.08
VRK1-207ENST00000557352 NMUP48645 174 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 SUB1P53999 127 aaKnown RBP eCLIP2.04□□□□□ -2.08
VRK1-207ENST00000557352 OR2B8PP59922 312 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 ARF6P62330 175 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 RAB11AP62491 216 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 LCN2P80188 198 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 ERHP84090 104 aaKnown RBP2.04□□□□□ -2.08
VRK1-207ENST00000557352 SLC38A11Q08AI6 406 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 PSG5Q15238 335 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 PRSS8Q16651 343 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 LTC4SQ16873 150 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 CLEC12BQ2HXU8 276 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 C5orf64Q2M2E5 130 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 LRRC75BQ2VPJ9 315 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 C2CD3Q4AC94 2353 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 COA6Q5JTJ3 125 aaKnown RBP2.04□□□□□ -2.08
VRK1-207ENST00000557352 LDLRAD2Q5SZI1 272 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 RPL7L1Q6DKI1 246 aaKnown RBP2.04□□□□□ -2.08
VRK1-207ENST00000557352 OTOGQ6ZRI0 2925 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms